Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0819.Seq
(763 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory recept... 25 0.66
AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory recept... 25 0.66
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 25 0.87
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 25 0.87
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 25 0.87
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 25 0.87
AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory recept... 24 1.2
AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory recept... 23 3.5
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 22 4.6
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 22 6.1
AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein. 22 6.1
>AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory receptor
candidate 55 protein.
Length = 402
Score = 25.0 bits (52), Expect = 0.66
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 337 KDKSVWFLDHDYLENMYGMFKKVNAREKVVG 429
K KS + HD L N+Y K V A K++G
Sbjct: 6 KVKSYFTTHHDTLHNIYTSMKPVYAICKLIG 36
>AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory receptor
candidate 11 protein.
Length = 344
Score = 25.0 bits (52), Expect = 0.66
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 337 KDKSVWFLDHDYLENMYGMFKKVNAREKVVG 429
K KS + HD L N+Y K V A K++G
Sbjct: 6 KVKSYFTTHHDTLHNIYTSMKPVYAICKLIG 36
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.87
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 130 LYDLYVSIFTYIFGICCCSIL 68
L +++ S F YIFG C I+
Sbjct: 382 LINIFASYFAYIFGKFACKIM 402
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.87
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 130 LYDLYVSIFTYIFGICCCSIL 68
L +++ S F YIFG C I+
Sbjct: 382 LINIFASYFAYIFGKFACKIM 402
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.87
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 130 LYDLYVSIFTYIFGICCCSIL 68
L +++ S F YIFG C I+
Sbjct: 382 LINIFASYFAYIFGKFACKIM 402
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.87
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 130 LYDLYVSIFTYIFGICCCSIL 68
L +++ S F YIFG C I+
Sbjct: 382 LINIFASYFAYIFGKFACKIM 402
>AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory receptor
candidate 1 protein.
Length = 373
Score = 24.2 bits (50), Expect = 1.2
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = -3
Query: 662 SHFFSLLCTNFTWNMFK--GPRSWCTIIVYFLYCLVSF 555
S F L+ N + F+ +S+CT + +YC V+F
Sbjct: 20 SEIFCLVNFNHRESYFRLSKAKSFCTFVAALVYCSVTF 57
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/44 (18%), Positives = 21/44 (47%)
Frame = -2
Query: 135 GIFMIFT*VFLLIYSGFVAVLFYITKLLFIKLHEIRVTYYYLLC 4
G+ ++F FL+I + + + LH + +++ ++C
Sbjct: 243 GLLLMFAVSFLIITQVIFVICVLVQSEKIVWLHLVYISFLGIIC 286
Score = 21.8 bits (44), Expect = 6.1
Identities = 9/35 (25%), Positives = 18/35 (51%), Gaps = 5/35 (14%)
Frame = -2
Query: 102 LIYSGFVAVL-----FYITKLLFIKLHEIRVTYYY 13
L+Y F+ ++ FYI + + + E+R Y+
Sbjct: 276 LVYISFLGIICAADVFYICHVCYATIQEVRAKIYF 310
>AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory receptor
candidate 51 protein.
Length = 771
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/30 (30%), Positives = 13/30 (43%)
Frame = -3
Query: 644 LCTNFTWNMFKGPRSWCTIIVYFLYCLVSF 555
+C NF + + + Y LYC SF
Sbjct: 525 ICKNFCFGFITKQLIFMIFVTYQLYCWSSF 554
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 22.2 bits (45), Expect = 4.6
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = -2
Query: 111 VFLLIYSGFVAV--LFYITKLLFIKLHEIRVTYYY 13
+ L+ SG+ V LFY ++F +H + TYY+
Sbjct: 70 LLFLLCSGYFTVHLLFYCPFIIFT-VHFLLCTYYF 103
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.8 bits (44), Expect = 6.1
Identities = 9/35 (25%), Positives = 18/35 (51%), Gaps = 5/35 (14%)
Frame = -2
Query: 102 LIYSGFVAVL-----FYITKLLFIKLHEIRVTYYY 13
L+Y F+ ++ FYI + + + E+R Y+
Sbjct: 995 LVYISFLGIICAADVFYICHVCYATIQEVRAKIYF 1029
>AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein.
Length = 301
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +1
Query: 286 GVLDVSNSFAVPFDEDDKDKSV 351
G L+ ++ + P D+DDKD+ +
Sbjct: 225 GSLEDDDNISDPEDDDDKDQDM 246
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,595
Number of Sequences: 336
Number of extensions: 3656
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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