Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0818.Seq
(719 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 149 2e-36
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 148 4e-36
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 145 4e-35
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 117 8e-27
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 81 9e-16
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 71 7e-13
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 4e-08
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 5e-04
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.94
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 31 1.2
SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015) 30 2.2
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06) 29 2.9
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 2.9
SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37) 29 3.8
SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9) 29 3.8
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05) 28 6.6
SB_37798| Best HMM Match : Sec15 (HMM E-Value=1.8) 28 6.6
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 149 bits (362), Expect = 2e-36
Identities = 69/73 (94%), Positives = 71/73 (97%)
Frame = +1
Query: 37 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 216
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 217 MNPNNTIFDAKRL 255
MNP NT+FDAKRL
Sbjct: 61 MNPENTVFDAKRL 73
Score = 133 bits (322), Expect = 1e-31
Identities = 60/86 (69%), Positives = 71/86 (82%)
Frame = +3
Query: 255 IGRKXEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSXMVLTKMKETAEA 434
IGRK +D V DM HWPF V+ +G +PKI+V +KGE K+FFPEE+S MVLTKMKETAEA
Sbjct: 74 IGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSMVLTKMKETAEA 133
Query: 435 YLGKTVQNAVITVPAYFNDSQRQATK 512
YLG V +AV+TVPAYF+DSQRQATK
Sbjct: 134 YLGAKVTDAVVTVPAYFHDSQRQATK 159
Score = 132 bits (319), Expect = 3e-31
Identities = 64/70 (91%), Positives = 67/70 (95%)
Frame = +2
Query: 509 KDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFE 688
KDAGTI+GLNVLRIINEPTAAAIAYGLDKK ERNVLI+DLGGGTFDVS+LTIEDGIFE
Sbjct: 159 KDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIYDLGGGTFDVSVLTIEDGIFE 218
Query: 689 VKSTAGDTHL 718
VKSTAGDTHL
Sbjct: 219 VKSTAGDTHL 228
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 148 bits (359), Expect = 4e-36
Identities = 68/73 (93%), Positives = 70/73 (95%)
Frame = +1
Query: 37 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 216
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 217 MNPNNTIFDAKRL 255
MNP NTIFDAKRL
Sbjct: 61 MNPTNTIFDAKRL 73
Score = 129 bits (311), Expect = 3e-30
Identities = 63/70 (90%), Positives = 65/70 (92%)
Frame = +2
Query: 509 KDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFE 688
KDAG ISGLNVLRIINEPTAAAIAYGLDKK ERNVLIFDLGGGTFDVS+L+IEDGIFE
Sbjct: 252 KDAGVISGLNVLRIINEPTAAAIAYGLDKKVGQERNVLIFDLGGGTFDVSVLSIEDGIFE 311
Query: 689 VKSTAGDTHL 718
VKST GDTHL
Sbjct: 312 VKSTHGDTHL 321
Score = 112 bits (269), Expect = 3e-25
Identities = 63/111 (56%), Positives = 72/111 (64%), Gaps = 25/111 (22%)
Frame = +3
Query: 255 IGRKXEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEV-------------- 392
IGR+ +D V+ DMKHW FEVV++ G+PK+KV YKGE KTFF EEV
Sbjct: 74 IGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVNEAGRPKVKVEYK 133
Query: 393 -----------SXMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATK 512
S MVL KMKETAEAYLG V +AV+TVPAYFNDSQRQATK
Sbjct: 134 GETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATK 184
Score = 70.5 bits (165), Expect = 1e-12
Identities = 33/42 (78%), Positives = 37/42 (88%)
Frame = +3
Query: 387 EVSXMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATK 512
++S MVL KMKETAEAYLG V +AV+TVPAYFNDSQRQATK
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATK 252
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 145 bits (351), Expect = 4e-35
Identities = 66/73 (90%), Positives = 70/73 (95%)
Frame = +1
Query: 37 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 216
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 217 MNPNNTIFDAKRL 255
+NP NTIFDAKRL
Sbjct: 61 LNPENTIFDAKRL 73
Score = 137 bits (332), Expect = 7e-33
Identities = 64/86 (74%), Positives = 74/86 (86%)
Frame = +3
Query: 255 IGRKXEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSXMVLTKMKETAEA 434
IGR+ +DATVQ+DMK WPF+++SD KPKI+V YKGE KTF EE+S MVL KMKETAEA
Sbjct: 74 IGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSMVLGKMKETAEA 133
Query: 435 YLGKTVQNAVITVPAYFNDSQRQATK 512
YLG+ V +AVITVPAYFNDSQRQATK
Sbjct: 134 YLGQKVTSAVITVPAYFNDSQRQATK 159
Score = 127 bits (307), Expect = 8e-30
Identities = 61/71 (85%), Positives = 68/71 (95%), Gaps = 1/71 (1%)
Frame = +2
Query: 509 KDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDG-IF 685
KDAGTI+GLNVLR+INEPTAAA+AYGLDK +GE+NVLIFDLGGGTFDVSILTI+DG +F
Sbjct: 159 KDAGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVLIFDLGGGTFDVSILTIDDGSLF 218
Query: 686 EVKSTAGDTHL 718
EVKSTAGDTHL
Sbjct: 219 EVKSTAGDTHL 229
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 117 bits (282), Expect = 8e-27
Identities = 54/68 (79%), Positives = 61/68 (89%), Gaps = 1/68 (1%)
Frame = +1
Query: 55 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPNN 231
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP N
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPEN 763
Query: 232 TIFDAKRL 255
T+FDAKRL
Sbjct: 764 TVFDAKRL 771
Score = 117 bits (281), Expect = 1e-26
Identities = 56/86 (65%), Positives = 67/86 (77%)
Frame = +3
Query: 255 IGRKXEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSXMVLTKMKETAEA 434
IGR +D +VQ D+K +PF+VV KP ++V K E KTF EE+S MVLTKMKETAEA
Sbjct: 772 IGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAMVLTKMKETAEA 831
Query: 435 YLGKTVQNAVITVPAYFNDSQRQATK 512
YLGK V +AV+TVPAYFND+QRQATK
Sbjct: 832 YLGKKVTHAVVTVPAYFNDAQRQATK 857
Score = 116 bits (278), Expect = 3e-26
Identities = 53/70 (75%), Positives = 64/70 (91%)
Frame = +2
Query: 509 KDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFE 688
KDAG I+GL V+RIINEPTAAAIAYG+DKK GE+N+L+FDLGGGTFDVS+LTI++G+FE
Sbjct: 857 KDAGAIAGLTVMRIINEPTAAAIAYGMDKK-EGEKNILVFDLGGGTFDVSLLTIDNGVFE 915
Query: 689 VKSTAGDTHL 718
V +T GDTHL
Sbjct: 916 VVATNGDTHL 925
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 81.0 bits (191), Expect = 9e-16
Identities = 38/68 (55%), Positives = 51/68 (75%)
Frame = +2
Query: 515 AGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVK 694
A +++G+ VLR+INEPTAAA+AYGL KK G NV++ DLGGGT DVS+L I+ G+F
Sbjct: 191 AASLAGITVLRVINEPTAAALAYGLHKK-EGVANVMVVDLGGGTLDVSLLNIQGGMFVTM 249
Query: 695 STAGDTHL 718
+ AG+ L
Sbjct: 250 AMAGNNRL 257
Score = 80.6 bits (190), Expect = 1e-15
Identities = 36/72 (50%), Positives = 51/72 (70%), Gaps = 2/72 (2%)
Frame = +1
Query: 43 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 216
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 217 MNPNNTIFDAKR 252
+NP NTI+DAKR
Sbjct: 90 INPKNTIYDAKR 101
Score = 46.8 bits (106), Expect = 2e-05
Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +3
Query: 297 KHWPFEVVSDG-GKPKIKVAYKGEDKTFFPEEVSXMVLTKMKETAEAYLGKTVQNAVITV 473
K + F V +D G V KG PEE+ V+ K++ AE L TV AV++V
Sbjct: 117 KLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGGYVIKKLRTMAERNLTTTVTKAVMSV 176
Query: 474 PAYFNDSQRQAT 509
PA F+ QR AT
Sbjct: 177 PAEFDIKQRNAT 188
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 71.3 bits (167), Expect = 7e-13
Identities = 33/57 (57%), Positives = 45/57 (78%)
Frame = +3
Query: 342 IKVAYKGEDKTFFPEEVSXMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATK 512
I V GE ++F PE++S +VL ++K AEA+LG+ V+ AVITVPA+FND+QRQATK
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATK 58
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/28 (82%), Positives = 23/28 (82%), Gaps = 2/28 (7%)
Frame = +2
Query: 539 VLRIINEPTAAAIAYGLDKK--GTGERN 616
VLRIINEPTAAAIAYGLDK G ERN
Sbjct: 92 VLRIINEPTAAAIAYGLDKARGGKAERN 119
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 69.7 bits (163), Expect = 2e-12
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Frame = +3
Query: 255 IGRKXEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSXMVLTKMKETAE 431
IGRK D VQ ++ H P++VV I+V Y G+ + F PE+V M+ T++K TAE
Sbjct: 130 IGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVMAMLFTRLKTTAE 189
Query: 432 AYLGKTVQNAVITVPAYFNDSQRQ 503
L V + VI+VP+Y+ D QR+
Sbjct: 190 IALKTKVTDCVISVPSYYTDRQRR 213
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +1
Query: 55 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 210
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
Score = 48.4 bits (110), Expect = 6e-06
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Frame = +2
Query: 512 DAGTISGLNVLRIINEPTAAAIAYGLDKKG---TGERNVLIFDLGGGTFDVSILTIEDGI 682
DA +GLN LR++N+ TA ++AYG+ K+ RNV+ D+G + V I G
Sbjct: 217 DASATAGLNCLRLMNDTTAVSLAYGIYKQDLPTDKPRNVVFVDIGHSSLQVCITAFLKGQ 276
Query: 683 FEVKSTAGDTHL 718
+V STA + +L
Sbjct: 277 LKVLSTAVEPNL 288
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 55.6 bits (128), Expect = 4e-08
Identities = 22/34 (64%), Positives = 30/34 (88%)
Frame = +2
Query: 617 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHL 718
+ ++DLGGGTFD+SIL I+ G+FEVK+T GDT+L
Sbjct: 2 IAVYDLGGGTFDISILEIQKGVFEVKATNGDTYL 35
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 44.8 bits (101), Expect = 7e-05
Identities = 20/57 (35%), Positives = 34/57 (59%)
Frame = +3
Query: 336 PKIKVAYKGEDKTFFPEEVSXMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQA 506
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP +FN ++R+A
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERRA 123
Score = 35.1 bits (77), Expect = 0.058
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Frame = +2
Query: 515 AGTISGLNVLRIINEPTAAAIAYGLDKK----GTGERNVLIFDLGGGTFDVSIL 664
A + GLNVL+I+N TA A+ YGL ++ T E++ + +D+G + +I+
Sbjct: 127 AAELVGLNVLQIMNSNTAVALNYGLFQQKSFNDTLEKHFMFYDMGASSTVATIV 180
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 41.9 bits (94), Expect = 5e-04
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +1
Query: 106 GKVEIIANDQGNRTTPSYVAFTDTERLI--GDAAKNQVAMNPNNTIFDAKRLSDVSXKML 279
G IIAND G+R TP+ VAF+DTE+LI +V N N K + ++ K +
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLIDKDGLPYYEVESNERNIQVSPKEVINMIYKKM 142
Query: 280 L 282
L
Sbjct: 143 L 143
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 0.94
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +1
Query: 115 EIIANDQGNRTTPSYVAFT-DTERL 186
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +2
Query: 617 VLIFDLGGGTFDVSILTIEDGIFEVK 694
V I+DLG GT++++IL E G++ ++
Sbjct: 319 VPIYDLGNGTYEMAILFHEPGVYSIR 344
>SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)
Length = 600
Score = 29.9 bits (64), Expect = 2.2
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 623 IFDLGGGTFDVSILTIEDGIFEV 691
+FDLG G+++V L +E G++ V
Sbjct: 311 VFDLGNGSYEVLFLVMEPGVYRV 333
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +2
Query: 566 AAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHL 718
A A L +G E + D G GT VS + +E+G +++ D H+
Sbjct: 1505 AGAGGLSLAIEGPSEAKLTCQDNGDGTCSVSYIPVEEGDYDIHIKFADEHI 1555
>SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06)
Length = 799
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 714 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVP 598
+++PA+ S +PS V +D VP P I+ + VP
Sbjct: 267 YLTPAISTQSTLPSGTVTLDQHNVPHPSGTITLDQHNVP 305
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -2
Query: 223 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 125
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37)
Length = 420
Score = 29.1 bits (62), Expect = 3.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 241 RILCCWGSSPPGSWRH 194
R++CC G SP WRH
Sbjct: 395 RVVCCQGDSPSPRWRH 410
>SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9)
Length = 340
Score = 29.1 bits (62), Expect = 3.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 241 RILCCWGSSPPGSWRH 194
R++CC G SP WRH
Sbjct: 170 RVVCCQGDSPSPRWRH 185
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 630 TSAAVPSTCPSLPSRMVSSR*NPPPATP 713
T A P P++PSR +R PPP P
Sbjct: 784 TKPATPRVPPNIPSRPPGARPTPPPPPP 811
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = -2
Query: 430 SAVSFIFVSTMXLTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTV 278
S F+F ST + +S +KV+ SPL + + P+ G S C V
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNV 1158
>SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05)
Length = 1312
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -2
Query: 691 HLEDTILDGKDGHVEGTAAEVKDKYISFSSTLFVKTVSNRSSSG 560
H+EDT DG DG E +E K + S SN+ G
Sbjct: 486 HIEDTTWDGSDGQREAGFSEQKAERSSSGGNRTTHGASNKPRDG 529
>SB_37798| Best HMM Match : Sec15 (HMM E-Value=1.8)
Length = 1007
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 443 QNCAECSHHGSRVLQ*LSKTSHKDA 517
Q+ EC G +L+ L+K SHKDA
Sbjct: 378 QDLRECEGEGLTILEKLAKLSHKDA 402
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,889,050
Number of Sequences: 59808
Number of extensions: 559575
Number of successful extensions: 1911
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1903
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1913853903
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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