Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0815.Seq
(726 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15042 Cluster: DNA ligase; n=125; Proteobacteria|Rep: ... 179 7e-44
UniRef50_P43813 Cluster: DNA ligase; n=39; Gammaproteobacteria|R... 126 4e-28
UniRef50_A7K488 Cluster: DNA ligase; n=2; Vibrio sp. Ex25|Rep: D... 126 7e-28
UniRef50_Q9CKA9 Cluster: DNA ligase; n=19; Proteobacteria|Rep: D... 116 8e-25
UniRef50_Q1LU20 Cluster: DNA ligase, NAD-dependent; n=2; Gammapr... 116 8e-25
UniRef50_A4BHE3 Cluster: DNA ligase; n=5; Gammaproteobacteria|Re... 113 4e-24
UniRef50_A3QFJ5 Cluster: DNA ligase, NAD-dependent; n=7; Gammapr... 112 7e-24
UniRef50_P57172 Cluster: DNA ligase; n=1; Buchnera aphidicola (A... 109 5e-23
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 108 1e-22
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 107 3e-22
UniRef50_Q9I3I4 Cluster: DNA ligase; n=45; Proteobacteria|Rep: D... 107 4e-22
UniRef50_Q604U8 Cluster: DNA ligase, NAD-dependent; n=3; Bacteri... 106 6e-22
UniRef50_Q7R767 Cluster: DNA ligase, NAD-dependent, putative; n=... 106 6e-22
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 104 2e-21
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 103 6e-21
UniRef50_Q6MRL9 Cluster: DNA ligase; n=1; Bdellovibrio bacteriov... 99 1e-19
UniRef50_Q9KF37 Cluster: DNA ligase; n=22; Bacteria|Rep: DNA lig... 98 2e-19
UniRef50_Q9WXV5 Cluster: DNA ligase; n=6; Bacteria|Rep: DNA liga... 98 2e-19
UniRef50_Q9AIU7 Cluster: DNA ligase; n=66; Firmicutes|Rep: DNA l... 97 3e-19
UniRef50_Q9K0E3 Cluster: DNA ligase; n=4; Neisseria|Rep: DNA lig... 96 9e-19
UniRef50_Q8D2B9 Cluster: DNA ligase; n=2; Bacteria|Rep: DNA liga... 96 9e-19
UniRef50_A1WY80 Cluster: DNA ligase, NAD-dependent; n=1; Halorho... 96 9e-19
UniRef50_A3I2H2 Cluster: DNA ligase; n=1; Algoriphagus sp. PR1|R... 95 2e-18
UniRef50_A3ZSW5 Cluster: DNA ligase; n=2; Planctomycetaceae|Rep:... 93 5e-18
UniRef50_Q7VRU2 Cluster: DNA ligase; n=1; Candidatus Blochmannia... 93 6e-18
UniRef50_Q4UN15 Cluster: DNA ligase; n=15; Rickettsieae|Rep: DNA... 93 6e-18
UniRef50_Q9A842 Cluster: DNA ligase; n=2; Caulobacter|Rep: DNA l... 91 3e-17
UniRef50_Q9Z585 Cluster: DNA ligase; n=8; Actinomycetales|Rep: D... 91 3e-17
UniRef50_P72588 Cluster: DNA ligase; n=32; Bacteria|Rep: DNA lig... 91 3e-17
UniRef50_Q9PAG2 Cluster: DNA ligase; n=18; Bacteria|Rep: DNA lig... 90 4e-17
UniRef50_A2RIF3 Cluster: DNA ligase; n=4; Lactococcus lactis|Rep... 90 4e-17
UniRef50_Q8EWL9 Cluster: DNA ligase; n=1; Mycoplasma penetrans|R... 90 6e-17
UniRef50_Q8A9C1 Cluster: DNA ligase; n=18; Bacteroidetes|Rep: DN... 90 6e-17
UniRef50_O31498 Cluster: DNA ligase; n=17; Firmicutes|Rep: DNA l... 90 6e-17
UniRef50_Q7UKD1 Cluster: DNA ligase; n=3; cellular organisms|Rep... 89 1e-16
UniRef50_Q211V0 Cluster: DNA ligase, NAD-dependent; n=2; Rhodops... 89 1e-16
UniRef50_A5NMI4 Cluster: DNA ligase, NAD-dependent; n=7; Alphapr... 89 1e-16
UniRef50_Q7MV47 Cluster: DNA ligase; n=6; Bacteroidetes|Rep: DNA... 88 2e-16
UniRef50_Q2Z0D4 Cluster: DNA ligase; n=2; Bacteria|Rep: DNA liga... 88 2e-16
UniRef50_Q57C89 Cluster: DNA ligase; n=46; Alphaproteobacteria|R... 87 4e-16
UniRef50_A5KRV4 Cluster: DNA ligase, NAD-dependent; n=1; candida... 87 4e-16
UniRef50_A5FWJ5 Cluster: DNA ligase, NAD-dependent; n=1; Acidiph... 87 4e-16
UniRef50_A4E8P5 Cluster: DNA ligase; n=1; Collinsella aerofacien... 87 4e-16
UniRef50_Q5GS88 Cluster: DNA ligase; n=7; Rickettsiales|Rep: DNA... 87 6e-16
UniRef50_Q98KC4 Cluster: DNA ligase; n=4; Alphaproteobacteria|Re... 86 7e-16
UniRef50_Q058C9 Cluster: DNA ligase; n=1; Buchnera aphidicola st... 86 7e-16
UniRef50_A5CQU5 Cluster: NAD-dependant DNA ligase; n=4; Bacteria... 86 7e-16
UniRef50_Q89B02 Cluster: DNA ligase; n=1; Buchnera aphidicola (B... 86 7e-16
UniRef50_O66880 Cluster: DNA ligase; n=4; Bacteria|Rep: DNA liga... 86 1e-15
UniRef50_Q83G99 Cluster: DNA ligase; n=2; Tropheryma whipplei|Re... 85 1e-15
UniRef50_A0LI67 Cluster: DNA ligase, NAD-dependent; n=5; Bacteri... 85 1e-15
UniRef50_Q74ER9 Cluster: DNA ligase, NAD-dependent; n=8; Bacteri... 85 2e-15
UniRef50_A7B8R1 Cluster: Putative uncharacterized protein; n=1; ... 84 3e-15
UniRef50_A5FRL4 Cluster: DNA ligase, NAD-dependent; n=3; Dehaloc... 84 4e-15
UniRef50_Q2N9V6 Cluster: DNA ligase; n=1; Erythrobacter litorali... 83 5e-15
UniRef50_Q7NR81 Cluster: DNA ligase; n=7; Proteobacteria|Rep: DN... 83 7e-15
UniRef50_Q6YQD6 Cluster: DNA ligase; n=3; Candidatus Phytoplasma... 83 7e-15
UniRef50_Q7NMN8 Cluster: DNA ligase; n=1; Gloeobacter violaceus|... 83 9e-15
UniRef50_Q2S459 Cluster: DNA ligase, NAD-dependent; n=1; Salinib... 83 9e-15
UniRef50_P49421 Cluster: DNA ligase; n=8; Bacteria|Rep: DNA liga... 83 9e-15
UniRef50_P47496 Cluster: DNA ligase; n=4; Mycoplasma|Rep: DNA li... 83 9e-15
UniRef50_A1TR21 Cluster: DNA ligase, NAD-dependent; n=1; Acidovo... 82 1e-14
UniRef50_P26996 Cluster: DNA ligase; n=24; Bacteria|Rep: DNA lig... 81 3e-14
UniRef50_Q4FPL3 Cluster: DNA ligase; n=2; Candidatus Pelagibacte... 81 4e-14
UniRef50_Q1NYF9 Cluster: DNA ligase; n=1; delta proteobacterium ... 81 4e-14
UniRef50_A5TVL5 Cluster: DNA ligase (NAD(+)); n=5; Fusobacterium... 81 4e-14
UniRef50_A1SMA5 Cluster: DNA ligase, NAD-dependent precursor; n=... 80 5e-14
UniRef50_Q99540 Cluster: Ligase-like protein; n=21; cellular org... 80 6e-14
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 79 1e-13
UniRef50_A3D5Y3 Cluster: DNA ligase (NAD(+)); n=1; Shewanella ba... 79 1e-13
UniRef50_Q8G830 Cluster: DNA ligase; n=4; Bifidobacterium|Rep: D... 78 2e-13
UniRef50_Q6MAB5 Cluster: DNA ligase; n=1; Candidatus Protochlamy... 78 2e-13
UniRef50_Q72BM7 Cluster: DNA ligase, NAD-dependent; n=5; Desulfo... 77 3e-13
UniRef50_Q26BQ5 Cluster: DNA ligase; n=2; Flavobacteria|Rep: DNA... 77 3e-13
UniRef50_P63974 Cluster: DNA ligase; n=21; Actinomycetales|Rep: ... 77 6e-13
UniRef50_Q2GDR2 Cluster: DNA ligase, NAD-dependent; n=1; Neorick... 76 8e-13
UniRef50_Q4A5J6 Cluster: DNA ligase; n=1; Mycoplasma synoviae 53... 76 1e-12
UniRef50_A7H8A2 Cluster: DNA ligase, NAD-dependent; n=3; Proteob... 75 1e-12
UniRef50_P28719 Cluster: DNA ligase; n=3; Alphaproteobacteria|Re... 75 1e-12
UniRef50_Q9PR23 Cluster: DNA ligase; n=1; Ureaplasma parvum|Rep:... 75 2e-12
UniRef50_Q7NAF8 Cluster: Lig; n=1; Mycoplasma gallisepticum|Rep:... 75 2e-12
UniRef50_O33102 Cluster: DNA ligase; n=11; Actinomycetales|Rep: ... 75 2e-12
UniRef50_Q28PE1 Cluster: DNA ligase; n=20; Rhodobacteraceae|Rep:... 73 5e-12
UniRef50_Q5UY84 Cluster: DNA ligase; n=4; Halobacteriaceae|Rep: ... 73 7e-12
UniRef50_A6DEF5 Cluster: NAD-dependent DNA ligase LigA; n=1; Cam... 73 1e-11
UniRef50_Q6KI95 Cluster: NAD(+)-dependent DNA ligase; n=1; Mycop... 72 2e-11
UniRef50_Q2GLI8 Cluster: DNA ligase, NAD-dependent; n=5; Anaplas... 71 2e-11
UniRef50_Q7M8A0 Cluster: DNA LIGASE POLYDEOXYRIBONUCLEOTIDE SYNT... 71 4e-11
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 70 5e-11
UniRef50_Q93IZ8 Cluster: DNA ligase; n=2; Streptomyces|Rep: DNA ... 70 7e-11
UniRef50_Q0BMQ3 Cluster: DNA ligase (NAD(+)); n=11; Francisella ... 70 7e-11
UniRef50_Q8KF74 Cluster: DNA ligase, NAD-dependent; n=11; Chloro... 69 9e-11
UniRef50_A6Q433 Cluster: DNA ligase, NAD-dependent; n=11; Epsilo... 69 9e-11
UniRef50_Q9RSQ5 Cluster: DNA ligase; n=2; Deinococcus|Rep: DNA l... 68 2e-10
UniRef50_O84148 Cluster: DNA ligase; n=7; Chlamydiaceae|Rep: DNA... 68 2e-10
UniRef50_O51502 Cluster: DNA ligase; n=3; Borrelia burgdorferi g... 68 3e-10
UniRef50_Q4AA72 Cluster: DNA ligase; n=5; Mycoplasma hyopneumoni... 67 4e-10
UniRef50_A1ATJ6 Cluster: DNA ligase, NAD-dependent; n=1; Pelobac... 67 4e-10
UniRef50_Q112N5 Cluster: DNA ligase, NAD-dependent; n=4; Bacteri... 67 5e-10
UniRef50_A5IY71 Cluster: DNA ligase; n=1; Mycoplasma agalactiae|... 67 5e-10
UniRef50_Q8EYU4 Cluster: DNA ligase; n=4; Leptospira|Rep: DNA li... 65 1e-09
UniRef50_Q98QH2 Cluster: DNA LIGASE; n=2; Mycoplasma pulmonis|Re... 64 4e-09
UniRef50_A0LDY1 Cluster: DNA ligase; n=2; Proteobacteria|Rep: DN... 63 8e-09
UniRef50_A5N2X7 Cluster: LigA1; n=2; Clostridium kluyveri DSM 55... 62 2e-08
UniRef50_Q1ZXG5 Cluster: BRCT domain-containing protein; n=2; Eu... 62 2e-08
UniRef50_O25336 Cluster: DNA ligase; n=7; Campylobacterales|Rep:... 62 2e-08
UniRef50_Q5YVN7 Cluster: DNA ligase; n=1; Nocardia farcinica|Rep... 61 3e-08
UniRef50_Q2Q0G8 Cluster: NAD-dependent DNA ligase; n=1; uncultur... 58 2e-07
UniRef50_O83642 Cluster: DNA ligase; n=1; Treponema pallidum|Rep... 58 2e-07
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ... 58 3e-07
UniRef50_A6BE81 Cluster: Putative uncharacterized protein; n=3; ... 55 2e-06
UniRef50_Q2Z0V9 Cluster: Putative NAD-dependent DNA ligase; n=1;... 55 2e-06
UniRef50_A6NWP3 Cluster: Putative uncharacterized protein; n=1; ... 54 3e-06
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba... 54 3e-06
UniRef50_A7AXK5 Cluster: Putative uncharacterized protein; n=1; ... 53 6e-06
UniRef50_Q73MH0 Cluster: DNA ligase, NAD-dependent; n=1; Trepone... 53 8e-06
UniRef50_Q332J4 Cluster: Putative NAD-dependent DNA ligase; n=1;... 53 8e-06
UniRef50_A5Z9H7 Cluster: Putative uncharacterized protein; n=2; ... 52 1e-05
UniRef50_Q6QGH1 Cluster: NAD-dependent DNA ligase, subunit A; n=... 52 1e-05
UniRef50_Q97FQ5 Cluster: NAD-dependent DNA ligase; n=14; Clostri... 52 2e-05
UniRef50_Q1FIG6 Cluster: DNA ligase, NAD-dependent; n=6; Clostri... 52 2e-05
UniRef50_Q1VH26 Cluster: NAD-dependent DNA ligase; n=1; Psychrof... 51 3e-05
UniRef50_A4VRF3 Cluster: DNA ligase, NAD-dependent, putative; n=... 51 3e-05
UniRef50_UPI00015C63D1 Cluster: hypothetical protein CKO_05104; ... 48 2e-04
UniRef50_A3JLD8 Cluster: Putative uncharacterized protein; n=1; ... 48 3e-04
UniRef50_A6GI82 Cluster: DNA ligase, NAD-dependent; n=1; Plesioc... 47 4e-04
UniRef50_P81650 Cluster: Beta-galactosidase; n=26; Gammaproteoba... 46 0.001
UniRef50_A6FGB3 Cluster: DNA ligase, NAD-dependent, putative; n=... 45 0.002
UniRef50_A0ITI0 Cluster: NAD-dependent DNA ligase precursor; n=3... 42 0.012
UniRef50_Q7N9N4 Cluster: Similar to putative DNA ligase-like pro... 41 0.027
UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia sp... 41 0.027
UniRef50_P25772 Cluster: Uncharacterized DNA ligase-like protein... 41 0.027
UniRef50_A0TI12 Cluster: Putative uncharacterized protein; n=1; ... 41 0.036
UniRef50_Q1QXD7 Cluster: DNA ligase (NAD+) precursor; n=1; Chrom... 40 0.063
UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8; Bacteria... 40 0.063
UniRef50_Q15XN9 Cluster: Glycoside hydrolase family 2, TIM barre... 37 0.44
UniRef50_A7FCR5 Cluster: DNA ligase, NAD-dependent; n=14; Yersin... 36 0.77
UniRef50_Q00W40 Cluster: COG0272: NAD-dependent DNA ligase; n=2;... 36 0.77
UniRef50_Q49078 Cluster: DNA ligase; n=5; Mollicutes|Rep: DNA li... 36 1.0
UniRef50_A6DPT5 Cluster: NAD-dependent DNA ligase; n=1; Lentisph... 36 1.0
UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus la... 36 1.0
UniRef50_A0UVE2 Cluster: Glycoside hydrolase family 2, TIM barre... 36 1.3
UniRef50_A1ZW82 Cluster: Putative uncharacterized protein; n=1; ... 35 1.8
UniRef50_Q9JN59 Cluster: Beta-galactosidase; n=16; Vibrio choler... 34 3.1
UniRef50_UPI0000F1EDC6 Cluster: PREDICTED: hypothetical protein;... 34 4.1
UniRef50_Q60PF9 Cluster: Putative uncharacterized protein CBG222... 34 4.1
UniRef50_Q21948 Cluster: Putative uncharacterized protein; n=2; ... 34 4.1
UniRef50_Q755S7 Cluster: AER441Cp; n=2; Saccharomycetaceae|Rep: ... 34 4.1
UniRef50_Q3F000 Cluster: NAD-dependent DNA ligase; n=1; Bacillus... 33 7.2
UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma j... 33 7.2
UniRef50_A5KA00 Cluster: Putative uncharacterized protein; n=1; ... 33 7.2
UniRef50_A5YT37 Cluster: Probable cell surface glycoprotein; n=1... 33 7.2
UniRef50_A6G4K3 Cluster: Putative uncharacterized protein; n=1; ... 33 9.5
UniRef50_A5VLF5 Cluster: Restriction modification system DNA spe... 33 9.5
UniRef50_Q0TZB9 Cluster: Putative uncharacterized protein; n=1; ... 33 9.5
>UniRef50_P15042 Cluster: DNA ligase; n=125; Proteobacteria|Rep: DNA
ligase - Escherichia coli (strain K12)
Length = 671
Score = 179 bits (435), Expect = 7e-44
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 76
FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV
Sbjct: 70 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 129
Query: 75 LVSAATRGDGTTGEDITSNVRTIRA 1
LVSAATRGDGTTGEDITSNVRTIRA
Sbjct: 130 LVSAATRGDGTTGEDITSNVRTIRA 154
Score = 120 bits (289), Expect = 4e-26
Identities = 54/55 (98%), Positives = 55/55 (100%)
Frame = -2
Query: 419 VRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAA 255
+RHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAA
Sbjct: 15 LRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAA 69
>UniRef50_P43813 Cluster: DNA ligase; n=39; Gammaproteobacteria|Rep:
DNA ligase - Haemophilus influenzae
Length = 679
Score = 126 bits (305), Expect = 4e-28
Identities = 62/86 (72%), Positives = 70/86 (81%), Gaps = 1/86 (1%)
Frame = -1
Query: 258 GFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEK-VTWCCELKLDGLAVSILYEN 82
GFSQIRHE+PMLSLDN F + F AF KR++DRL K +T+CCE KLDGLAVSILY N
Sbjct: 78 GFSQIRHEIPMLSLDNAFSDAEFNAFVKRIEDRLILLPKPLTFCCEPKLDGLAVSILYVN 137
Query: 81 GVLVSAATRGDGTTGEDITSNVRTIR 4
G L AATRGDGTTGEDIT+N+RTIR
Sbjct: 138 GELTQAATRGDGTTGEDITANIRTIR 163
Score = 84.2 bits (199), Expect = 3e-15
Identities = 35/64 (54%), Positives = 46/64 (71%)
Frame = -2
Query: 449 RTTTDRTANDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 270
+T D +R +EY YHV+D P +PD+EYDRL +L+ LE +HPE +T DSPTQRVGA
Sbjct: 14 QTQLDNLRKTLRQYEYEYHVLDNPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVGA 73
Query: 269 APLA 258
PL+
Sbjct: 74 KPLS 77
>UniRef50_A7K488 Cluster: DNA ligase; n=2; Vibrio sp. Ex25|Rep: DNA
ligase - Vibrio sp. Ex25
Length = 287
Score = 126 bits (303), Expect = 7e-28
Identities = 58/85 (68%), Positives = 69/85 (81%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 76
FSQ+ HEVPMLSLDN FD+ +F+KR Q+R+ + +CCE KLDGLAVS+LYENGV
Sbjct: 91 FSQVTHEVPMLSLDNAFDDSELDSFHKRAQERVGSQSVKEYCCEPKLDGLAVSLLYENGV 150
Query: 75 LVSAATRGDGTTGEDITSNVRTIRA 1
LV AATRGDGTTGE+IT NVRTI+A
Sbjct: 151 LVQAATRGDGTTGENITENVRTIKA 175
Score = 77.8 bits (183), Expect = 3e-13
Identities = 34/55 (61%), Positives = 44/55 (80%)
Frame = -2
Query: 419 VRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAA 255
+ +H Y+V D PEIPDAEYDRLMREL ++E ++P+LIT DSP+QRVG PL+A
Sbjct: 36 LHYHAVRYYVEDNPEIPDAEYDRLMRELLDIEAENPDLITVDSPSQRVGGQPLSA 90
>UniRef50_Q9CKA9 Cluster: DNA ligase; n=19; Proteobacteria|Rep: DNA
ligase - Pasteurella multocida
Length = 673
Score = 116 bits (278), Expect = 8e-25
Identities = 55/85 (64%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVT-WCCELKLDGLAVSILYENG 79
F+Q++HE+PMLSLDN F +E AF KR+QDRL + K+ +CCE KLDGLAVSILY +G
Sbjct: 71 FAQVQHEMPMLSLDNAFSDEELHAFVKRIQDRLVFSPKLLEFCCEPKLDGLAVSILYVDG 130
Query: 78 VLVSAATRGDGTTGEDITSNVRTIR 4
L AATRGDG+TGEDIT N+RT+R
Sbjct: 131 KLTQAATRGDGSTGEDITLNIRTVR 155
Score = 85.8 bits (203), Expect = 1e-15
Identities = 36/58 (62%), Positives = 47/58 (81%)
Frame = -2
Query: 419 VRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAASAR 246
+R+HEY YHV+D P+IPDAEYDRL L+ LE ++P+ +PDSPTQRVGA PL+A A+
Sbjct: 16 LRYHEYQYHVLDNPQIPDAEYDRLFHRLKTLEQQYPQWFSPDSPTQRVGAKPLSAFAQ 73
>UniRef50_Q1LU20 Cluster: DNA ligase, NAD-dependent; n=2;
Gammaproteobacteria|Rep: DNA ligase, NAD-dependent -
Baumannia cicadellinicola subsp. Homalodisca coagulata
Length = 671
Score = 116 bits (278), Expect = 8e-25
Identities = 51/88 (57%), Positives = 72/88 (81%), Gaps = 1/88 (1%)
Frame = -1
Query: 267 AAGGFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK-NNEKVTWCCELKLDGLAVSIL 91
A F ++ HEVPMLSLD++F++ SFLAF++R+++RL+ N +T+CCELK DG+AVS+L
Sbjct: 66 AQSKFRKVIHEVPMLSLDHIFNDTSFLAFDRRIRNRLQYGNNYLTYCCELKFDGIAVSLL 125
Query: 90 YENGVLVSAATRGDGTTGEDITSNVRTI 7
Y++G L+ AATRGDG GED+T N+RTI
Sbjct: 126 YKHGKLIRAATRGDGHIGEDVTDNIRTI 153
Score = 63.3 bits (147), Expect = 6e-09
Identities = 27/55 (49%), Positives = 38/55 (69%)
Frame = -2
Query: 437 DRTANDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 273
++ +R+ +LY+ DAPE+ D EYD LM +LRELE + P+L T DSPTQ +G
Sbjct: 9 EQLRQQLRYWNFLYYAKDAPEVSDVEYDWLMMKLRELERQWPDLKTADSPTQHIG 63
>UniRef50_A4BHE3 Cluster: DNA ligase; n=5; Gammaproteobacteria|Rep:
DNA ligase - Reinekea sp. MED297
Length = 674
Score = 113 bits (272), Expect = 4e-24
Identities = 52/86 (60%), Positives = 65/86 (75%)
Frame = -1
Query: 258 GFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENG 79
GF + H +PMLSLDN F+ + AF KR++DRL + + + CE KLDG+AVS+LYE G
Sbjct: 69 GFETVEHRMPMLSLDNAFNHDDLGAFVKRLKDRLNDPSPIEFACEPKLDGIAVSLLYEQG 128
Query: 78 VLVSAATRGDGTTGEDITSNVRTIRA 1
LV ATRGDGTTGEDIT+NVRTIR+
Sbjct: 129 HLVRGATRGDGTTGEDITANVRTIRS 154
Score = 70.9 bits (166), Expect = 3e-11
Identities = 28/54 (51%), Positives = 41/54 (75%)
Frame = -2
Query: 419 VRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLA 258
+R +++ Y+V++ IPD EYDRLM EL+ +E++HP+ +TP SPTQRV AP A
Sbjct: 15 IRRYDHEYYVLNESAIPDVEYDRLMEELKRIESEHPQWVTPQSPTQRVAGAPQA 68
>UniRef50_A3QFJ5 Cluster: DNA ligase, NAD-dependent; n=7;
Gammaproteobacteria|Rep: DNA ligase, NAD-dependent -
Shewanella loihica (strain BAA-1088 / PV-4)
Length = 669
Score = 112 bits (270), Expect = 7e-24
Identities = 57/89 (64%), Positives = 65/89 (73%)
Frame = -1
Query: 267 AAGGFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILY 88
A F+Q+ H PMLSLDNVF EE F AF KRV D+L + +CCE KLDGLAVSILY
Sbjct: 66 ALSKFNQVTHLKPMLSLDNVFSEEEFNAFYKRVGDKLPDTP--AFCCEPKLDGLAVSILY 123
Query: 87 ENGVLVSAATRGDGTTGEDITSNVRTIRA 1
+GV AATRGDGT GEDIT NVRTI++
Sbjct: 124 RDGVFERAATRGDGTVGEDITENVRTIKS 152
Score = 79.8 bits (188), Expect = 6e-14
Identities = 35/56 (62%), Positives = 42/56 (75%)
Frame = -2
Query: 425 NDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLA 258
+++ H Y Y+V DAP IPDAEYDRLMR L+ELE +HPEL DSPTQRVG L+
Sbjct: 13 DELNQHNYRYYVDDAPSIPDAEYDRLMRRLQELEAEHPELALADSPTQRVGGEALS 68
>UniRef50_P57172 Cluster: DNA ligase; n=1; Buchnera aphidicola
(Acyrthosiphon pisum)|Rep: DNA ligase - Buchnera
aphidicola subsp. Acyrthosiphon pisum (Acyrthosiphon
pisumsymbiotic bacterium)
Length = 675
Score = 109 bits (263), Expect = 5e-23
Identities = 48/83 (57%), Positives = 63/83 (75%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 76
F +I+H PMLSL+N FD +L F KR++ + NNE +++CCELKLDG+A+SI+YE G+
Sbjct: 70 FKKIKHFSPMLSLENTFDVNGYLNFKKRIKKSIHNNEPLSFCCELKLDGVAISIIYEEGI 129
Query: 75 LVSAATRGDGTTGEDITSNVRTI 7
V AATRGDG GE+ITSN R I
Sbjct: 130 FVRAATRGDGFEGENITSNARMI 152
Score = 59.7 bits (138), Expect = 7e-08
Identities = 27/47 (57%), Positives = 34/47 (72%)
Frame = -2
Query: 410 HEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 270
+EY YH ++ I DAEYD L R+L ELE K+ ELI DSPTQ+VG+
Sbjct: 18 YEYFYHTLNQSIISDAEYDYLFRQLYELELKNKELIPSDSPTQKVGS 64
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 108 bits (260), Expect = 1e-22
Identities = 51/53 (96%), Positives = 51/53 (96%)
Frame = +2
Query: 521 SESYYNSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 679
SESYY LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR
Sbjct: 62 SESYYG-LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 113
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 107 bits (257), Expect = 3e-22
Identities = 50/54 (92%), Positives = 51/54 (94%)
Frame = +2
Query: 521 SESYYNSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRT 682
S S NSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR+
Sbjct: 15 SSSPGNSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRS 68
>UniRef50_Q9I3I4 Cluster: DNA ligase; n=45; Proteobacteria|Rep: DNA
ligase - Pseudomonas aeruginosa
Length = 794
Score = 107 bits (256), Expect = 4e-22
Identities = 55/97 (56%), Positives = 67/97 (69%), Gaps = 10/97 (10%)
Frame = -1
Query: 264 AGGFSQIRHEVPMLSLDNVFDEESFLAFNKRVQ----------DRLKNNEKVTWCCELKL 115
A F ++RHE+PMLSL N F+E+ L F++RV+ D L +V + CE KL
Sbjct: 70 ASAFGEVRHEIPMLSLGNAFEEQDLLDFDRRVREGLADLLPGGDLLGGGAEVEYSCEPKL 129
Query: 114 DGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIR 4
DGLAVS+LYE G LV ATRGDG+TGEDITSNVRTIR
Sbjct: 130 DGLAVSLLYERGQLVRGATRGDGSTGEDITSNVRTIR 166
Score = 79.8 bits (188), Expect = 6e-14
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = -2
Query: 410 HEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAA 255
H Y Y+V+D P IPDAEYDRL REL+ LE ++P+L+TPDSPTQRV P +A
Sbjct: 21 HNYRYYVLDEPSIPDAEYDRLFRELQALEAEYPQLLTPDSPTQRVSGTPASA 72
>UniRef50_Q604U8 Cluster: DNA ligase, NAD-dependent; n=3;
Bacteria|Rep: DNA ligase, NAD-dependent - Methylococcus
capsulatus
Length = 673
Score = 106 bits (254), Expect = 6e-22
Identities = 49/85 (57%), Positives = 66/85 (77%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 76
F+++RHEVPMLSL+N F EE AF++RV+ L + + + + E KLDGLAV++LY++GV
Sbjct: 73 FTEVRHEVPMLSLENAFSEEDLTAFDRRVRKEL-SRDTLEYVAEPKLDGLAVNLLYQDGV 131
Query: 75 LVSAATRGDGTTGEDITSNVRTIRA 1
LV AATRGDG GED+T NVR +RA
Sbjct: 132 LVRAATRGDGEVGEDVTHNVRAVRA 156
Score = 73.7 bits (173), Expect = 4e-12
Identities = 32/56 (57%), Positives = 41/56 (73%)
Frame = -2
Query: 422 DVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAA 255
++ H Y+ +D P I DAEYDRLM EL +E ++PEL+TPDSPTQRVGA P+ A
Sbjct: 17 EIEFHNVRYYRLDDPLITDAEYDRLMAELLAIEARYPELVTPDSPTQRVGAPPVEA 72
>UniRef50_Q7R767 Cluster: DNA ligase, NAD-dependent, putative; n=2;
cellular organisms|Rep: DNA ligase, NAD-dependent,
putative - Plasmodium yoelii yoelii
Length = 354
Score = 106 bits (254), Expect = 6e-22
Identities = 49/85 (57%), Positives = 66/85 (77%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 76
F+++RHEVPMLSL+N F EE AF++RV+ L + + + + E KLDGLAV++LY++GV
Sbjct: 253 FTEVRHEVPMLSLENAFSEEDLTAFDRRVRKEL-SRDTLEYVAEPKLDGLAVNLLYQDGV 311
Query: 75 LVSAATRGDGTTGEDITSNVRTIRA 1
LV AATRGDG GED+T NVR +RA
Sbjct: 312 LVRAATRGDGEVGEDVTHNVRAVRA 336
Score = 73.7 bits (173), Expect = 4e-12
Identities = 32/56 (57%), Positives = 41/56 (73%)
Frame = -2
Query: 422 DVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAA 255
++ H Y+ +D P I DAEYDRLM EL +E ++PEL+TPDSPTQRVGA P+ A
Sbjct: 197 EIEFHNVRYYRLDDPLITDAEYDRLMAELLAIEARYPELVTPDSPTQRVGAPPVEA 252
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 104 bits (250), Expect = 2e-21
Identities = 47/49 (95%), Positives = 49/49 (100%)
Frame = +2
Query: 536 NSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRT 682
+SLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR+
Sbjct: 6 DSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRS 54
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 103 bits (246), Expect = 6e-21
Identities = 46/48 (95%), Positives = 48/48 (100%)
Frame = +2
Query: 539 SLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRT 682
+LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR+
Sbjct: 25 ALAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRS 72
>UniRef50_Q6MRL9 Cluster: DNA ligase; n=1; Bdellovibrio
bacteriovorus|Rep: DNA ligase - Bdellovibrio
bacteriovorus
Length = 684
Score = 98.7 bits (235), Expect = 1e-19
Identities = 42/86 (48%), Positives = 61/86 (70%)
Frame = -1
Query: 258 GFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENG 79
GF++ +H +PMLSL N + E F++RV+ L + V + CELK DGL++ ++YENG
Sbjct: 85 GFTKAQHRLPMLSLANSYSPEDIFEFDERVRKFLNTEDPVEYLCELKFDGLSMELIYENG 144
Query: 78 VLVSAATRGDGTTGEDITSNVRTIRA 1
LV A TRGDGT GED+T N++TI++
Sbjct: 145 QLVRAITRGDGTVGEDVTHNIKTIKS 170
Score = 56.4 bits (130), Expect = 7e-07
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = -2
Query: 491 CRGFLALM-VRYGINRTTTDRTANDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKH 315
CR + + M Y +++ + + H++ YHV+D P I D EYD+L EL ++E
Sbjct: 6 CRDWTSEMGANYSMSKKRHEELKKIISEHDHNYHVLDKPTITDYEYDQLFAELLDIEKNP 65
Query: 314 PELITPDSPTQRVGAAPL 261
L DSP+QRVG L
Sbjct: 66 KGLDLSDSPSQRVGGTVL 83
>UniRef50_Q9KF37 Cluster: DNA ligase; n=22; Bacteria|Rep: DNA ligase
- Bacillus halodurans
Length = 669
Score = 98.3 bits (234), Expect = 2e-19
Identities = 44/83 (53%), Positives = 61/83 (73%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 76
F ++ H PMLSL N F ++ F++RV+ + ++VT+ CELK+DGLA+S++YE+G
Sbjct: 72 FEKVEHRTPMLSLGNAFSDQDLRDFDRRVRQVV--GDEVTYSCELKIDGLAISLIYESGR 129
Query: 75 LVSAATRGDGTTGEDITSNVRTI 7
V ATRGDGTTGEDIT N+RTI
Sbjct: 130 FVRGATRGDGTTGEDITQNLRTI 152
Score = 59.7 bits (138), Expect = 7e-08
Identities = 28/59 (47%), Positives = 37/59 (62%)
Frame = -2
Query: 437 DRTANDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPL 261
++ N + + Y Y+V+D P + DAEYD LM EL ELE PEL + SP+ RVG PL
Sbjct: 11 EKLRNQLEEYGYHYYVLDKPLVSDAEYDGLMNELIELEEAFPELKSDTSPSVRVGGPPL 69
>UniRef50_Q9WXV5 Cluster: DNA ligase; n=6; Bacteria|Rep: DNA ligase
- Thermotoga maritima
Length = 688
Score = 97.9 bits (233), Expect = 2e-19
Identities = 43/86 (50%), Positives = 63/86 (73%)
Frame = -1
Query: 258 GFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENG 79
GF ++H VPMLSLDN ++EE L F++RV+ L+ E V + ELK+DG+++++ YENG
Sbjct: 75 GFKTVKHSVPMLSLDNTYNEEEILEFDRRVKKALQEAE-VEYVAELKIDGVSIALRYENG 133
Query: 78 VLVSAATRGDGTTGEDITSNVRTIRA 1
V ATRGDG GED++ NV+T+R+
Sbjct: 134 RFVLGATRGDGIEGEDVSENVKTVRS 159
Score = 75.8 bits (178), Expect = 1e-12
Identities = 33/59 (55%), Positives = 42/59 (71%)
Frame = -2
Query: 437 DRTANDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPL 261
+R ++ +H Y Y+V++ P I D EYDRLMR L ELE +PEL+TPDSPTQRVG L
Sbjct: 15 ERLREEIEYHNYRYYVLNDPVITDEEYDRLMRRLIELERMYPELVTPDSPTQRVGGKVL 73
>UniRef50_Q9AIU7 Cluster: DNA ligase; n=66; Firmicutes|Rep: DNA
ligase - Staphylococcus aureus
Length = 667
Score = 97.5 bits (232), Expect = 3e-19
Identities = 44/89 (49%), Positives = 63/89 (70%)
Frame = -1
Query: 267 AAGGFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILY 88
A F+++ H+ PMLSL N F+E+ F++R+++++ N V + CELK+DGLAVS+ Y
Sbjct: 66 AQASFNKVNHDTPMLSLGNAFNEDDLRKFDQRIREQIGN---VEYMCELKIDGLAVSLKY 122
Query: 87 ENGVLVSAATRGDGTTGEDITSNVRTIRA 1
+G V TRGDGTTGEDIT N++TI A
Sbjct: 123 VDGYFVQGLTRGDGTTGEDITENLKTIHA 151
Score = 60.9 bits (141), Expect = 3e-08
Identities = 26/55 (47%), Positives = 37/55 (67%)
Frame = -2
Query: 419 VRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAA 255
+ + Y Y+V D P +PD+EYD+L+ EL ++E +HPE T DSPT RVG A+
Sbjct: 15 LNQYSYEYYVEDNPSVPDSEYDKLLHELIKIEEEHPEYKTVDSPTVRVGGEAQAS 69
>UniRef50_Q9K0E3 Cluster: DNA ligase; n=4; Neisseria|Rep: DNA ligase
- Neisseria meningitidis serogroup B
Length = 841
Score = 95.9 bits (228), Expect = 9e-19
Identities = 49/93 (52%), Positives = 63/93 (67%), Gaps = 9/93 (9%)
Frame = -1
Query: 258 GFSQIRHEVPMLSLDN---------VFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGL 106
GF+++RHEVPMLSL N VFD AF++RV+D L + E K DGL
Sbjct: 91 GFAEVRHEVPMLSLTNAFSPQDENGVFDHAEMYAFDQRVRDGLDGGNP-EYVIEPKFDGL 149
Query: 105 AVSILYENGVLVSAATRGDGTTGEDITSNVRTI 7
A+S+LY +GVLV AATRGDGTTGED+T N++T+
Sbjct: 150 AISLLYRDGVLVQAATRGDGTTGEDVTQNIKTV 182
Score = 78.6 bits (185), Expect = 1e-13
Identities = 35/62 (56%), Positives = 42/62 (67%)
Frame = -2
Query: 434 RTANDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAA 255
R + + + Y Y+ +DAP +PDAEYD+L REL LE HPEL PDSPTQRVG PLA
Sbjct: 32 RLTDLLNRYAYEYYTLDAPSVPDAEYDKLFRELEALELNHPELKLPDSPTQRVGGEPLAG 91
Query: 254 SA 249
A
Sbjct: 92 FA 93
>UniRef50_Q8D2B9 Cluster: DNA ligase; n=2; Bacteria|Rep: DNA ligase
- Wigglesworthia glossinidia brevipalpis
Length = 591
Score = 95.9 bits (228), Expect = 9e-19
Identities = 41/85 (48%), Positives = 65/85 (76%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 76
F +I+H MLSL+++F+ ++ L F+++V+ L NEK +CCELK+DGLA++++Y+NG+
Sbjct: 76 FKKIKHLSNMLSLESIFNYKNLLNFHEKVKKNLFYNEKRYYCCELKIDGLAINLIYKNGI 135
Query: 75 LVSAATRGDGTTGEDITSNVRTIRA 1
L SA+TRGDG GED+T N I++
Sbjct: 136 LDSASTRGDGLQGEDVTKNALEIKS 160
>UniRef50_A1WY80 Cluster: DNA ligase, NAD-dependent; n=1;
Halorhodospira halophila SL1|Rep: DNA ligase,
NAD-dependent - Halorhodospira halophila (strain DSM 244
/ SL1) (Ectothiorhodospirahalophila (strain DSM 244 /
SL1))
Length = 711
Score = 95.9 bits (228), Expect = 9e-19
Identities = 44/89 (49%), Positives = 64/89 (71%)
Frame = -1
Query: 267 AAGGFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILY 88
A GF + H+ PMLSLDN F+ + + F++R++DRL V + E KLDG+++S+ Y
Sbjct: 73 AQEGFEAVVHDTPMLSLDNAFEADDLVDFDRRIRDRL-GVASVVYTGEPKLDGISLSLTY 131
Query: 87 ENGVLVSAATRGDGTTGEDITSNVRTIRA 1
++G LV A TRGDG TGED+T+NVRT+R+
Sbjct: 132 QDGELVRAGTRGDGHTGEDVTANVRTLRS 160
Score = 66.5 bits (155), Expect = 6e-10
Identities = 27/49 (55%), Positives = 37/49 (75%)
Frame = -2
Query: 422 DVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 276
++ H+Y Y+V+D P I DAEYD L REL+ LE +P+L++ DSPTQRV
Sbjct: 21 EISEHDYHYYVLDRPTISDAEYDALFRELQRLEAAYPDLVSSDSPTQRV 69
>UniRef50_A3I2H2 Cluster: DNA ligase; n=1; Algoriphagus sp. PR1|Rep:
DNA ligase - Algoriphagus sp. PR1
Length = 791
Score = 94.7 bits (225), Expect = 2e-18
Identities = 44/84 (52%), Positives = 59/84 (70%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 76
F + H MLSL N + +E +AF++RVQ L N + CE+K DG+A+S++YENG
Sbjct: 47 FETVVHAYKMLSLGNTYSKEELIAFDERVQKGLGGNP-YEYFCEMKFDGVAISLVYENGK 105
Query: 75 LVSAATRGDGTTGEDITSNVRTIR 4
LV A TRGDGT G+D+T+NVRTIR
Sbjct: 106 LVRAVTRGDGTRGDDVTANVRTIR 129
Score = 49.2 bits (112), Expect = 1e-04
Identities = 21/38 (55%), Positives = 29/38 (76%)
Frame = -2
Query: 386 DAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 273
D I D E+D+L+ EL +LET+ P+L+ PDSP+QRVG
Sbjct: 3 DQAVISDFEFDKLLEELVQLETEFPDLLQPDSPSQRVG 40
>UniRef50_A3ZSW5 Cluster: DNA ligase; n=2; Planctomycetaceae|Rep:
DNA ligase - Blastopirellula marina DSM 3645
Length = 679
Score = 93.5 bits (222), Expect = 5e-18
Identities = 42/83 (50%), Positives = 58/83 (69%)
Frame = -1
Query: 252 SQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVL 73
+Q+ H VPMLS+DN + E A+ +R+Q +L EK+ W ELK+DG+A S+LYE G L
Sbjct: 71 NQVAHRVPMLSIDNTYSLEELKAYGERIQ-KLLPEEKIEWVVELKIDGVAASLLYEAGRL 129
Query: 72 VSAATRGDGTTGEDITSNVRTIR 4
V TRG+G G+DIT N+RTI+
Sbjct: 130 VRGVTRGNGQVGDDITHNIRTIK 152
Score = 67.7 bits (158), Expect = 3e-10
Identities = 27/59 (45%), Positives = 41/59 (69%)
Frame = -2
Query: 437 DRTANDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPL 261
D ++R H+ +Y+V EI D EYD+L+ L+ LE ++P+L+TPDSPTQR+G P+
Sbjct: 9 DHLRAEIRRHDRMYYVEAKTEISDLEYDQLLNRLKHLEAENPQLVTPDSPTQRIGDQPV 67
>UniRef50_Q7VRU2 Cluster: DNA ligase; n=1; Candidatus Blochmannia
floridanus|Rep: DNA ligase - Blochmannia floridanus
Length = 594
Score = 93.1 bits (221), Expect = 6e-18
Identities = 43/87 (49%), Positives = 63/87 (72%), Gaps = 5/87 (5%)
Frame = -1
Query: 252 SQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVT-----WCCELKLDGLAVSILY 88
++IRH+ PMLSL+++ D+ L F+KR++ +L N+ + +CCELK+DG+A+SILY
Sbjct: 71 NRIRHQKPMLSLNSIRDKSQLLLFDKRIKYKLSNHYNINQNLIVYCCELKIDGVALSILY 130
Query: 87 ENGVLVSAATRGDGTTGEDITSNVRTI 7
+ G LV AATRGDG GE++T NV I
Sbjct: 131 KQGKLVHAATRGDGKIGENVTKNVNAI 157
Score = 51.2 bits (117), Expect = 3e-05
Identities = 23/44 (52%), Positives = 30/44 (68%)
Frame = -2
Query: 407 EYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 276
EYLY+V ++ D EYD L+ ELR+LE K+P LIT S TQ +
Sbjct: 19 EYLYYVKSESKVSDEEYDILLEELRQLEFKYPYLITKSSSTQSI 62
>UniRef50_Q4UN15 Cluster: DNA ligase; n=15; Rickettsieae|Rep: DNA
ligase - Rickettsia felis (Rickettsia azadi)
Length = 689
Score = 93.1 bits (221), Expect = 6e-18
Identities = 41/84 (48%), Positives = 61/84 (72%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 76
F++I H++PMLSL N FDE+ F R+++ L+ +E CE K+DGL+ S +Y+NG+
Sbjct: 78 FAKITHQIPMLSLSNAFDEQDVRDFVDRIKNFLRLDEFAPIFCEPKIDGLSFSAIYKNGL 137
Query: 75 LVSAATRGDGTTGEDITSNVRTIR 4
L + ATRGDG GEDIT+N++TI+
Sbjct: 138 LTTGATRGDGYVGEDITANIKTIK 161
Score = 46.8 bits (106), Expect = 5e-04
Identities = 18/56 (32%), Positives = 35/56 (62%)
Frame = -2
Query: 437 DRTANDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 270
+ A+ + + + Y++ D P + D+EYD+L +LE K P L+ +SP++++GA
Sbjct: 17 EELADKIAAYNHAYYIEDNPLVSDSEYDQLFNTNLKLEQKFPHLVLENSPSKKIGA 72
>UniRef50_Q9A842 Cluster: DNA ligase; n=2; Caulobacter|Rep: DNA
ligase - Caulobacter crescentus (Caulobacter vibrioides)
Length = 783
Score = 91.1 bits (216), Expect = 3e-17
Identities = 43/85 (50%), Positives = 58/85 (68%), Gaps = 2/85 (2%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQD--RLKNNEKVTWCCELKLDGLAVSILYEN 82
F+ + H VPMLSLDN F + + F+ RV+ R+ +E V + E K+DGL+ S+ YE
Sbjct: 80 FAPVEHGVPMLSLDNAFSNDEAIEFDARVRRFLRISPSETVAYTAEPKIDGLSASLRYEK 139
Query: 81 GVLVSAATRGDGTTGEDITSNVRTI 7
GVLV ATRGDG GED+T+N+RTI
Sbjct: 140 GVLVQGATRGDGRVGEDVTANLRTI 164
Score = 54.4 bits (125), Expect = 3e-06
Identities = 24/56 (42%), Positives = 35/56 (62%)
Frame = -2
Query: 437 DRTANDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 270
+R A+ + H+ YH D P + DAEYD L R ++ET+ P L+ +SP+ RVGA
Sbjct: 19 ERLADLLATHDIAYHQEDNPTVSDAEYDALKRRNLDIETRFPHLVRDNSPSMRVGA 74
>UniRef50_Q9Z585 Cluster: DNA ligase; n=8; Actinomycetales|Rep: DNA
ligase - Streptomyces coelicolor
Length = 735
Score = 91.1 bits (216), Expect = 3e-17
Identities = 45/83 (54%), Positives = 58/83 (69%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 76
F+ ++H MLSLDN F+++ A+ +R+ L E + CELK+DGLAV++ YE G
Sbjct: 86 FTAVQHPTRMLSLDNTFNDDELAAWFERIARELGEQE-YHFLCELKVDGLAVNLTYERGR 144
Query: 75 LVSAATRGDGTTGEDITSNVRTI 7
LV AATRGDG TGEDIT NVRTI
Sbjct: 145 LVRAATRGDGRTGEDITPNVRTI 167
Score = 71.7 bits (168), Expect = 2e-11
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -2
Query: 428 ANDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 267
A + H + Y+V DAP + DAE+DRL+R L ELE +HPEL TP+SPTQ+V A
Sbjct: 28 AEQIEEHRFRYYVNDAPVVSDAEFDRLLRTLEELEERHPELRTPESPTQKVAGA 81
>UniRef50_P72588 Cluster: DNA ligase; n=32; Bacteria|Rep: DNA ligase
- Synechocystis sp. (strain PCC 6803)
Length = 669
Score = 90.6 bits (215), Expect = 3e-17
Identities = 39/88 (44%), Positives = 58/88 (65%)
Frame = -1
Query: 264 AGGFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYE 85
A F + H +P+ SL+N F+ + + +R Q EK + CELK+DG A+++ YE
Sbjct: 66 ASQFRSVAHNIPLYSLENAFNVQELQQWQERWQRIAPTIEKAEYVCELKIDGSAIALTYE 125
Query: 84 NGVLVSAATRGDGTTGEDITSNVRTIRA 1
NG+LV TRGDGTTGE+I+ N++TIR+
Sbjct: 126 NGLLVRGVTRGDGTTGEEISQNIKTIRS 153
Score = 70.5 bits (165), Expect = 4e-11
Identities = 34/64 (53%), Positives = 44/64 (68%), Gaps = 3/64 (4%)
Frame = -2
Query: 446 TTTDRTAN---DVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 276
TT DR ++ Y Y+V+DAP + D+ YD+L REL+ LE ++PELITPDSPTQRV
Sbjct: 2 TTPDRLLQLRQQLQKASYAYYVLDAPVMEDSVYDQLYRELQRLEAENPELITPDSPTQRV 61
Query: 275 GAAP 264
G P
Sbjct: 62 GEQP 65
>UniRef50_Q9PAG2 Cluster: DNA ligase; n=18; Bacteria|Rep: DNA ligase
- Xylella fastidiosa
Length = 837
Score = 90.2 bits (214), Expect = 4e-17
Identities = 42/86 (48%), Positives = 58/86 (67%)
Frame = -1
Query: 264 AGGFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYE 85
A FS++RH VPMLSL+N F + L F +R+ L + E KLDGLA+S+ Y+
Sbjct: 75 ATAFSEVRHTVPMLSLNNAFSDPEVLEFVRRITACLGETAP-GFSAEPKLDGLAISLRYQ 133
Query: 84 NGVLVSAATRGDGTTGEDITSNVRTI 7
NG+ + ATRGDG TGED+T+N+RT+
Sbjct: 134 NGIFIQGATRGDGVTGEDVTANLRTL 159
Score = 72.1 bits (169), Expect = 1e-11
Identities = 30/44 (68%), Positives = 36/44 (81%)
Frame = -2
Query: 404 YLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 273
Y YHV+D P IPDA+YDR++REL LE +P+L TPDSPTQRVG
Sbjct: 28 YHYHVLDQPRIPDADYDRMLRELDALEAAYPDLATPDSPTQRVG 71
>UniRef50_A2RIF3 Cluster: DNA ligase; n=4; Lactococcus lactis|Rep:
DNA ligase - Lactococcus lactis subsp. cremoris (strain
MG1363)
Length = 686
Score = 90.2 bits (214), Expect = 4e-17
Identities = 43/85 (50%), Positives = 60/85 (70%)
Frame = -1
Query: 258 GFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENG 79
GF + RH + SL +VF E + +RV+ + N E + CELK+DGL++S+ YENG
Sbjct: 68 GFVKFRHPYNLYSLGDVFSREELALWEERVRKEIVNPEYI---CELKIDGLSLSLYYENG 124
Query: 78 VLVSAATRGDGTTGEDITSNVRTIR 4
+LV+AATRGDGTTGE+IT NV+ I+
Sbjct: 125 LLVTAATRGDGTTGENITENVKRIK 149
Score = 54.8 bits (126), Expect = 2e-06
Identities = 23/58 (39%), Positives = 34/58 (58%)
Frame = -2
Query: 404 YLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAASARYAMKY 231
Y Y+ +D P + D+EYD L EL +LE ++P+L+ DSPT R G L ++ Y
Sbjct: 19 YEYYTLDEPSVEDSEYDHLYHELVKLEQENPQLVRADSPTHRTGGVILDGFVKFRHPY 76
>UniRef50_Q8EWL9 Cluster: DNA ligase; n=1; Mycoplasma penetrans|Rep:
DNA ligase - Mycoplasma penetrans
Length = 701
Score = 89.8 bits (213), Expect = 6e-17
Identities = 36/85 (42%), Positives = 63/85 (74%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 76
F++++HE+PM+SL N FDEE L F+ ++ + +++ ++ E K+DGL++S+ Y++G
Sbjct: 88 FNKVKHEIPMMSLSNAFDEEDLLKFDNDIKKAIGSSD-FSYVVEPKIDGLSISVKYKDGN 146
Query: 75 LVSAATRGDGTTGEDITSNVRTIRA 1
L+ A TRGDG GED+T N++TI++
Sbjct: 147 LIQAVTRGDGEIGEDVTQNIKTIKS 171
Score = 51.2 bits (117), Expect = 3e-05
Identities = 19/50 (38%), Positives = 36/50 (72%)
Frame = -2
Query: 422 DVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 273
++ + Y Y+ ++ P + D EYD ++EL +LET++PE +P+SP+++VG
Sbjct: 32 NLNQYNYEYYGLENPSVSDYEYDMCLKELIQLETQYPEFDSPNSPSKKVG 81
>UniRef50_Q8A9C1 Cluster: DNA ligase; n=18; Bacteroidetes|Rep: DNA
ligase - Bacteroides thetaiotaomicron
Length = 666
Score = 89.8 bits (213), Expect = 6e-17
Identities = 42/85 (49%), Positives = 57/85 (67%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 76
F+Q+ H+ PMLSL N + E F +RV+ L NE CCE+K DG ++S+ YE+G
Sbjct: 69 FTQVAHKYPMLSLANTYSEGEVTDFYERVRKAL--NEDFEICCEMKYDGTSISLTYEDGK 126
Query: 75 LVSAATRGDGTTGEDITSNVRTIRA 1
LV A TRGDG G+D+T NV+TIR+
Sbjct: 127 LVRAVTRGDGEKGDDVTDNVKTIRS 151
Score = 61.3 bits (142), Expect = 2e-08
Identities = 29/64 (45%), Positives = 40/64 (62%)
Frame = -2
Query: 422 DVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAASARY 243
++ H Y Y+V++APEI D E+D MREL++LE HPE +SPT RVG+ +
Sbjct: 13 ELHRHNYNYYVLNAPEISDKEFDDKMRELQDLELAHPEYKDENSPTMRVGSDINKNFTQV 72
Query: 242 AMKY 231
A KY
Sbjct: 73 AHKY 76
>UniRef50_O31498 Cluster: DNA ligase; n=17; Firmicutes|Rep: DNA
ligase - Bacillus subtilis
Length = 668
Score = 89.8 bits (213), Expect = 6e-17
Identities = 43/84 (51%), Positives = 58/84 (69%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 76
F ++ H PMLSL N F+ + F++RV+ + + V + ELK+DGLAVS+ YE+G
Sbjct: 72 FQKVTHGTPMLSLGNAFNADDLRDFDRRVRQSV--GDDVAYNVELKIDGLAVSLRYEDGY 129
Query: 75 LVSAATRGDGTTGEDITSNVRTIR 4
V ATRGDGTTGEDIT N++TIR
Sbjct: 130 FVRGATRGDGTTGEDITENLKTIR 153
Score = 75.4 bits (177), Expect = 1e-12
Identities = 32/55 (58%), Positives = 41/55 (74%)
Frame = -2
Query: 419 VRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAA 255
+ + Y Y+ +D P +PDAEYDRLM+EL +E +HP+L TPDSPTQRVG A L A
Sbjct: 17 INKYSYEYYTLDEPSVPDAEYDRLMQELIAIEEEHPDLRTPDSPTQRVGGAVLEA 71
>UniRef50_Q7UKD1 Cluster: DNA ligase; n=3; cellular organisms|Rep:
DNA ligase - Rhodopirellula baltica
Length = 706
Score = 89.0 bits (211), Expect = 1e-16
Identities = 43/82 (52%), Positives = 54/82 (65%)
Frame = -1
Query: 249 QIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLV 70
Q+ H VPMLS+DN + E A +R++ L+ E V W E K+DG+A SI YENG L
Sbjct: 80 QVPHRVPMLSIDNTYSREELAAAMERIEKSLEG-ESVAWTMEYKIDGVAGSIRYENGELT 138
Query: 69 SAATRGDGTTGEDITSNVRTIR 4
A TRG+G G+DIT NVRTIR
Sbjct: 139 LALTRGNGQVGDDITHNVRTIR 160
Score = 60.1 bits (139), Expect = 5e-08
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = -2
Query: 425 NDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 273
+++ H LY+ APEI D +YD+L+ EL +LE HP+L PDSPTQ VG
Sbjct: 21 DEINRHNRLYYDDAAPEITDLQYDQLLAELTQLENDHPDLRRPDSPTQLVG 71
>UniRef50_Q211V0 Cluster: DNA ligase, NAD-dependent; n=2;
Rhodopseudomonas palustris|Rep: DNA ligase,
NAD-dependent - Rhodopseudomonas palustris (strain
BisB18)
Length = 795
Score = 89.0 bits (211), Expect = 1e-16
Identities = 46/89 (51%), Positives = 64/89 (71%), Gaps = 2/89 (2%)
Frame = -1
Query: 264 AGGFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK-NNEKV-TWCCELKLDGLAVSIL 91
A GF++++H VPMLSL N F ++ F RV+ LK + E++ E K+DGL++S+
Sbjct: 83 ARGFAKVQHAVPMLSLGNAFSDDEVAEFLTRVRRFLKLDAEQIPAIVAEPKIDGLSLSLR 142
Query: 90 YENGVLVSAATRGDGTTGEDITSNVRTIR 4
YE+G LV AATRGDG TGED+T+NVRTI+
Sbjct: 143 YEHGKLVRAATRGDGFTGEDVTANVRTIK 171
Score = 65.7 bits (153), Expect = 1e-09
Identities = 29/63 (46%), Positives = 40/63 (63%)
Frame = -2
Query: 434 RTANDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAA 255
R + ++ H Y+ DAP+I DAEYD L + +E K PEL++ DSPTQ+VGAAP
Sbjct: 26 RLSLEIERHNNAYYQDDAPKISDAEYDALRHRVEAIEAKFPELVSSDSPTQKVGAAPARG 85
Query: 254 SAR 246
A+
Sbjct: 86 FAK 88
>UniRef50_A5NMI4 Cluster: DNA ligase, NAD-dependent; n=7;
Alphaproteobacteria|Rep: DNA ligase, NAD-dependent -
Methylobacterium sp. 4-46
Length = 871
Score = 89.0 bits (211), Expect = 1e-16
Identities = 46/90 (51%), Positives = 62/90 (68%), Gaps = 2/90 (2%)
Frame = -1
Query: 267 AAGGFSQIRHEVPMLSLDNVFDEESFLAFNKRVQD--RLKNNEKVTWCCELKLDGLAVSI 94
A+ F+++RH VPMLSL N F +E F +RV+ L +E + E K+DGL++S+
Sbjct: 123 ASDKFAKVRHAVPMLSLGNAFADEEIEEFVERVRRFLGLPASESLAVTAEPKIDGLSLSL 182
Query: 93 LYENGVLVSAATRGDGTTGEDITSNVRTIR 4
YE G LV+AATRGDG GED+T+NVRTIR
Sbjct: 183 RYEGGRLVTAATRGDGEVGEDVTANVRTIR 212
Score = 44.0 bits (99), Expect = 0.004
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = -2
Query: 449 RTTTDRTANDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 270
R + + ++ H+ YH DAP I DA YD L R L +E + P+L + + VGA
Sbjct: 62 RAAHEALSAEIAEHDRRYHGEDAPIISDAAYDSLRRRLEAIEERFPDLAGTGAASASVGA 121
>UniRef50_Q7MV47 Cluster: DNA ligase; n=6; Bacteroidetes|Rep: DNA
ligase - Porphyromonas gingivalis (Bacteroides
gingivalis)
Length = 669
Score = 88.2 bits (209), Expect = 2e-16
Identities = 41/86 (47%), Positives = 60/86 (69%)
Frame = -1
Query: 258 GFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENG 79
GF+ +RH+ PMLSL N ++ + F +RV + L+ ELK DGL++S++YE+G
Sbjct: 72 GFASVRHDRPMLSLSNTYNYDEIGDFYRRVSEGLQG-APFEIVAELKFDGLSISLIYEDG 130
Query: 78 VLVSAATRGDGTTGEDITSNVRTIRA 1
+LV A TRGDG G+D+T+NVRTIR+
Sbjct: 131 MLVRAVTRGDGIMGDDVTANVRTIRS 156
Score = 66.1 bits (154), Expect = 8e-10
Identities = 27/50 (54%), Positives = 38/50 (76%)
Frame = -2
Query: 419 VRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 270
+R HEY Y+V+ +P I D EYD +M++L ELE ++PE +PDSPT RVG+
Sbjct: 18 LREHEYRYYVLSSPTIDDFEYDAMMKQLEELEREYPEWDSPDSPTHRVGS 67
>UniRef50_Q2Z0D4 Cluster: DNA ligase; n=2; Bacteria|Rep: DNA ligase
- uncultured candidate division WS3 bacterium
Length = 667
Score = 88.2 bits (209), Expect = 2e-16
Identities = 48/100 (48%), Positives = 63/100 (63%), Gaps = 3/100 (3%)
Frame = -1
Query: 291 AYSTCRRCAAG---GFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCEL 121
A S RR A GFS + H VPMLSL+N + E +AF+ RV+ L E V + E
Sbjct: 58 ADSPTRRVAGAPSDGFSTVEHAVPMLSLENTYSPEELVAFDARVRKGLPG-EPVEYVVEP 116
Query: 120 KLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRA 1
KLDG+++S+ Y G L A TRGDG G+D+T+NVRTIR+
Sbjct: 117 KLDGVSISLRYVEGSLDVAVTRGDGERGDDVTANVRTIRS 156
Score = 72.5 bits (170), Expect = 1e-11
Identities = 32/52 (61%), Positives = 38/52 (73%)
Frame = -2
Query: 419 VRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAP 264
+RHH+ Y+V APEI D EYD LM EL LE +HPEL+T DSPT+RV AP
Sbjct: 18 IRHHDRKYYVDAAPEIADGEYDALMSELAALEREHPELVTADSPTRRVAGAP 69
>UniRef50_Q57C89 Cluster: DNA ligase; n=46; Alphaproteobacteria|Rep:
DNA ligase - Brucella abortus
Length = 719
Score = 87.0 bits (206), Expect = 4e-16
Identities = 44/89 (49%), Positives = 59/89 (66%), Gaps = 2/89 (2%)
Frame = -1
Query: 267 AAGGFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKN--NEKVTWCCELKLDGLAVSI 94
A F+ + H PMLSLDN F +E F V L ++ + + E K+DGL++SI
Sbjct: 77 ALATFAPVVHARPMLSLDNAFSDEDVRDFVGSVYRFLGQLPDDSIAFTAEPKIDGLSMSI 136
Query: 93 LYENGVLVSAATRGDGTTGEDITSNVRTI 7
YENG+LVS ATRGDGTTGE++T+N+RTI
Sbjct: 137 RYENGILVSGATRGDGTTGENVTANIRTI 165
Score = 67.3 bits (157), Expect = 4e-10
Identities = 30/62 (48%), Positives = 38/62 (61%)
Frame = -2
Query: 437 DRTANDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLA 258
+R A + HH+ LYH D PEI DA YD L R +E P L+ DSP++RVGAAP
Sbjct: 19 ERLARAIAHHDELYHAKDRPEISDAAYDALKRRNEAIEAHFPALVRDDSPSRRVGAAPAL 78
Query: 257 AS 252
A+
Sbjct: 79 AT 80
>UniRef50_A5KRV4 Cluster: DNA ligase, NAD-dependent; n=1; candidate
division TM7 genomosp. GTL1|Rep: DNA ligase,
NAD-dependent - candidate division TM7 genomosp. GTL1
Length = 675
Score = 87.0 bits (206), Expect = 4e-16
Identities = 44/84 (52%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKN-NEKVTWCCELKLDGLAVSILYENG 79
F ++ H MLSL++VF E A+ RV+ +EKV + E+K+DGLA S++YENG
Sbjct: 72 FQKVEHRTRMLSLNDVFSREEVEAWLLRVRKLAPEMDEKVEFFAEVKMDGLACSLIYENG 131
Query: 78 VLVSAATRGDGTTGEDITSNVRTI 7
LV A TRGDG GED+TSNVRTI
Sbjct: 132 KLVRAVTRGDGLVGEDVTSNVRTI 155
Score = 70.5 bits (165), Expect = 4e-11
Identities = 30/51 (58%), Positives = 38/51 (74%)
Frame = -2
Query: 410 HEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLA 258
+ Y Y+V+D P + DA YD L EL++LE +HPELIT DSPTQRVG P+A
Sbjct: 20 YSYEYYVLDRPSVADAIYDSLFGELKKLEAEHPELITADSPTQRVGGVPIA 70
>UniRef50_A5FWJ5 Cluster: DNA ligase, NAD-dependent; n=1;
Acidiphilium cryptum JF-5|Rep: DNA ligase, NAD-dependent
- Acidiphilium cryptum (strain JF-5)
Length = 682
Score = 87.0 bits (206), Expect = 4e-16
Identities = 41/88 (46%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Frame = -1
Query: 264 AGGFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK-NNEKVTWCCELKLDGLAVSILY 88
+G F ++RH +PMLSLDNVF+ F+ F ++ L + + E K+DGL++S+ Y
Sbjct: 74 SGAFGKVRHRLPMLSLDNVFEPADFVEFCASIRRFLGLGAAPLAFVAEPKIDGLSISLTY 133
Query: 87 ENGVLVSAATRGDGTTGEDITSNVRTIR 4
EN V ATRGDGT GED+T N+RT+R
Sbjct: 134 ENRRFVRGATRGDGTEGEDVTENLRTLR 161
Score = 38.3 bits (85), Expect = 0.19
Identities = 21/48 (43%), Positives = 26/48 (54%)
Frame = -2
Query: 398 YHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAA 255
Y+ DAP + DA YD L RE L HP+L + +VGAAP A
Sbjct: 32 YYRDDAPIMDDAAYDALRREAESLRAAHPDLA---AALDQVGAAPSGA 76
>UniRef50_A4E8P5 Cluster: DNA ligase; n=1; Collinsella aerofaciens
ATCC 25986|Rep: DNA ligase - Collinsella aerofaciens
ATCC 25986
Length = 742
Score = 87.0 bits (206), Expect = 4e-16
Identities = 41/84 (48%), Positives = 57/84 (67%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 76
F+ + H M S+D+ D + A+ +R +D L VT+ CELK+DGL V++ Y+NG
Sbjct: 99 FTPVTHMARMYSMDDAMDLDELDAWLQRTEDALGAGN-VTYTCELKIDGLGVALTYQNGT 157
Query: 75 LVSAATRGDGTTGEDITSNVRTIR 4
V AATRGDGTTGED++ NVRTI+
Sbjct: 158 FVRAATRGDGTTGEDVSLNVRTIK 181
Score = 67.3 bits (157), Expect = 4e-10
Identities = 26/51 (50%), Positives = 42/51 (82%)
Frame = -2
Query: 425 NDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 273
+++ +H Y Y+++DAPEI DA +D+++ EL+E+E +P+L+TPDS TQRVG
Sbjct: 42 HELDYHAYRYYMLDAPEITDAAFDKMLVELQEIEAAYPDLVTPDSYTQRVG 92
>UniRef50_Q5GS88 Cluster: DNA ligase; n=7; Rickettsiales|Rep: DNA
ligase - Wolbachia sp. subsp. Brugia malayi (strain TRS)
Length = 683
Score = 86.6 bits (205), Expect = 6e-16
Identities = 42/84 (50%), Positives = 57/84 (67%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 76
FS+I+H PMLSL+N +DE+ F R++ R E++ CE K+DGL+ S +YE+G
Sbjct: 70 FSKIKHREPMLSLENAYDEQGVERFLSRIK-RFLIEEEIEVFCEPKIDGLSFSAVYEDGR 128
Query: 75 LVSAATRGDGTTGEDITSNVRTIR 4
V AATRGDG GED+T NV TI+
Sbjct: 129 FVKAATRGDGFIGEDVTRNVATIK 152
Score = 45.6 bits (103), Expect = 0.001
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = -2
Query: 425 NDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHP-ELITPDSPTQRVGAAP 264
+ + +H+ LYH PEI DAEYD+L ++L E+E + P +T D VGAAP
Sbjct: 16 DQISYHDVLYHQKSKPEIADAEYDKLKQKLVEMEGQLPGACVTQDG----VGAAP 66
>UniRef50_Q98KC4 Cluster: DNA ligase; n=4; Alphaproteobacteria|Rep:
DNA ligase - Rhizobium loti (Mesorhizobium loti)
Length = 734
Score = 86.2 bits (204), Expect = 7e-16
Identities = 44/89 (49%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Frame = -1
Query: 264 AGGFSQIRHEVPMLSLDNVFDEES---FLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSI 94
A GF+++RH VPMLSL + +E F+ +R DR K+ + + + E K+DGL+ S+
Sbjct: 77 AEGFAKVRHAVPMLSLAKAYTDEDVTDFIERGRRFFDRDKDLD-IAFTAEPKIDGLSASL 135
Query: 93 LYENGVLVSAATRGDGTTGEDITSNVRTI 7
YENGV V ATRGDG GEDIT+N+RTI
Sbjct: 136 RYENGVFVQGATRGDGAVGEDITANLRTI 164
Score = 60.5 bits (140), Expect = 4e-08
Identities = 28/63 (44%), Positives = 37/63 (58%)
Frame = -2
Query: 434 RTANDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAA 255
R A ++ H+ YH DAP I DAEYD L R +E + P L+ DSP++RVGA P
Sbjct: 20 RLAEEIAGHDRRYHAEDAPTITDAEYDALRRRNLAIEERFPGLVREDSPSRRVGAPPAEG 79
Query: 254 SAR 246
A+
Sbjct: 80 FAK 82
>UniRef50_Q058C9 Cluster: DNA ligase; n=1; Buchnera aphidicola str.
Cc (Cinara cedri)|Rep: DNA ligase - Buchnera aphidicola
subsp. Cinara cedri
Length = 587
Score = 86.2 bits (204), Expect = 7e-16
Identities = 35/83 (42%), Positives = 61/83 (73%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 76
F++ H++PMLSL ++ + F F+K++++ K+ +T+ C+ K DGLAV++ Y+NG+
Sbjct: 73 FTEFFHKIPMLSLRSINNISDFDLFDKKIKEYFKHINVITYFCDFKFDGLAVNLFYKNGI 132
Query: 75 LVSAATRGDGTTGEDITSNVRTI 7
L+SA+TRG+G+ GE+IT N+ I
Sbjct: 133 LISASTRGNGSVGENITKNILMI 155
Score = 39.1 bits (87), Expect = 0.11
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = -2
Query: 419 VRHHEYLYHVMDAPEIPDAEYDRLMRELRELE 324
+++H Y+YH +D+P I D YD L +L +LE
Sbjct: 15 IKYHNYMYHTLDSPIISDILYDELYNKLLQLE 46
>UniRef50_A5CQU5 Cluster: NAD-dependant DNA ligase; n=4;
Bacteria|Rep: NAD-dependant DNA ligase - Clavibacter
michiganensis subsp. michiganensis (strain NCPPB 382)
Length = 853
Score = 86.2 bits (204), Expect = 7e-16
Identities = 42/83 (50%), Positives = 58/83 (69%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 76
F+ + H MLSLDNVF EE + +V+ R + +V + ELK+DGLA+++ YE+GV
Sbjct: 93 FAPVTHAERMLSLDNVFSEEELAEWAAKVE-RDAGSGRVRYLSELKIDGLAINLRYEHGV 151
Query: 75 LVSAATRGDGTTGEDITSNVRTI 7
LV+AATRGDG GED+T NV T+
Sbjct: 152 LVTAATRGDGVVGEDVTQNVLTM 174
Score = 53.2 bits (122), Expect = 6e-06
Identities = 25/55 (45%), Positives = 31/55 (56%)
Frame = -2
Query: 437 DRTANDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 273
D ++ H Y+ DA + DAEYD L+ EL LE HP L + DSPTQ VG
Sbjct: 31 DALRTEIERHRDEYYGADASTLSDAEYDALVHELEALEEAHPTLRSQDSPTQTVG 85
>UniRef50_Q89B02 Cluster: DNA ligase; n=1; Buchnera aphidicola
(Baizongia pistaciae)|Rep: DNA ligase - Buchnera
aphidicola subsp. Baizongia pistaciae
Length = 672
Score = 86.2 bits (204), Expect = 7e-16
Identities = 40/83 (48%), Positives = 57/83 (68%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 76
F + H PMLSL+NVF + FL F K++ + + EK+ +C ELK DG+A++++Y NG+
Sbjct: 71 FKKFSHITPMLSLNNVFIKNDFLKFYKKIVNNI-TVEKIFFCSELKFDGVAINLIYINGL 129
Query: 75 LVSAATRGDGTTGEDITSNVRTI 7
L A TRG+G GED+TSNV I
Sbjct: 130 LFRAVTRGNGYEGEDVTSNVNMI 152
Score = 53.6 bits (123), Expect = 5e-06
Identities = 25/63 (39%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Frame = -2
Query: 425 NDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELIT-PDSPTQRVGAAPLAASA 249
+++R+H YLYH +++P+I D +YD L+ EL+ LE K + DSPTQ VG+ L
Sbjct: 13 DEIRYHAYLYHTLNSPKISDEKYDFLVIELQRLEKKCKYSVRFKDSPTQSVGSENLPEFK 72
Query: 248 RYA 240
+++
Sbjct: 73 KFS 75
>UniRef50_O66880 Cluster: DNA ligase; n=4; Bacteria|Rep: DNA ligase
- Aquifex aeolicus
Length = 720
Score = 85.8 bits (203), Expect = 1e-15
Identities = 39/87 (44%), Positives = 59/87 (67%)
Frame = -1
Query: 264 AGGFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYE 85
+G F ++H PMLSLDN + E+ F++RV+ ++ E V + E KLDG ++++YE
Sbjct: 95 SGEFPTVKHYTPMLSLDNAYSEDELREFDRRVR-QITGLEVVEYAVEPKLDGAGIALVYE 153
Query: 84 NGVLVSAATRGDGTTGEDITSNVRTIR 4
N + V ATRGDG GEDIT+N++TI+
Sbjct: 154 NDLFVRGATRGDGEYGEDITNNLKTIK 180
Score = 73.7 bits (173), Expect = 4e-12
Identities = 31/50 (62%), Positives = 40/50 (80%)
Frame = -2
Query: 419 VRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 270
+R+H+Y Y+V P IPD +YDRL R L+E+E K+PELITPDSPTQRV +
Sbjct: 43 IRYHDYKYYVEANPVIPDYDYDRLFRALKEIEKKYPELITPDSPTQRVAS 92
>UniRef50_Q83G99 Cluster: DNA ligase; n=2; Tropheryma whipplei|Rep:
DNA ligase - Tropheryma whipplei (strain Twist)
(Whipple's bacillus)
Length = 634
Score = 85.4 bits (202), Expect = 1e-15
Identities = 38/80 (47%), Positives = 54/80 (67%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 76
F ++H PMLSLDNVF + ++ ++ + ++ T+ CELK+DG+ VS+ Y NG
Sbjct: 80 FEPVKHIEPMLSLDNVFSLDQLHSWYEKTKKICPEGDQCTFVCELKIDGVGVSLRYANGY 139
Query: 75 LVSAATRGDGTTGEDITSNV 16
L+SAATRGDG GEDIT N+
Sbjct: 140 LISAATRGDGAIGEDITQNM 159
>UniRef50_A0LI67 Cluster: DNA ligase, NAD-dependent; n=5;
Bacteria|Rep: DNA ligase, NAD-dependent -
Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
Length = 694
Score = 85.4 bits (202), Expect = 1e-15
Identities = 41/85 (48%), Positives = 52/85 (61%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 76
F H +PMLSL+N E F +RV+ L + V + E K+DGLAV ++YENG
Sbjct: 92 FLPFPHTIPMLSLENAMSEAEVFEFARRVRKILGDRGDVDFMAEPKMDGLAVELVYENGE 151
Query: 75 LVSAATRGDGTTGEDITSNVRTIRA 1
L A TRGDG GED+T N +TIRA
Sbjct: 152 LTGAGTRGDGYVGEDVTRNAKTIRA 176
Score = 82.6 bits (195), Expect = 9e-15
Identities = 36/53 (67%), Positives = 41/53 (77%)
Frame = -2
Query: 422 DVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAP 264
++RHH YLY+V+D PEI D YD L REL LE +P LITPDSPTQRVGAAP
Sbjct: 36 EIRHHNYLYYVLDRPEISDEAYDGLFRELVRLEESYPALITPDSPTQRVGAAP 88
>UniRef50_Q74ER9 Cluster: DNA ligase, NAD-dependent; n=8;
Bacteria|Rep: DNA ligase, NAD-dependent - Geobacter
sulfurreducens
Length = 670
Score = 85.0 bits (201), Expect = 2e-15
Identities = 37/86 (43%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQD--RLKNNEKVTWCCELKLDGLAVSILYEN 82
F Q+ H +PMLSL+N F + F+ RV+ L + ++ + CE K+DGLAV ++YE
Sbjct: 72 FEQVTHRIPMLSLENAFTDVEIADFDDRVKRFLGLHGDVEIDYVCEPKMDGLAVELVYER 131
Query: 81 GVLVSAATRGDGTTGEDITSNVRTIR 4
G+L +TRGDG GE++T N++T+R
Sbjct: 132 GILTVGSTRGDGVVGENVTHNLKTVR 157
Score = 76.6 bits (180), Expect = 6e-13
Identities = 37/66 (56%), Positives = 44/66 (66%), Gaps = 3/66 (4%)
Frame = -2
Query: 449 RTTTDRTA---NDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 279
+T DR A ++ H LY+ D PEI DAEYD L REL +LET+ P+L PDSPTQR
Sbjct: 4 QTAADRVAALRTELERHNRLYYAEDRPEITDAEYDLLFRELVDLETRFPDLAAPDSPTQR 63
Query: 278 VGAAPL 261
VG APL
Sbjct: 64 VGGAPL 69
>UniRef50_A7B8R1 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 777
Score = 84.2 bits (199), Expect = 3e-15
Identities = 40/84 (47%), Positives = 58/84 (69%)
Frame = -1
Query: 258 GFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENG 79
GFS++RH M+SLD+VF E + R+ + ++ + E+K+DGL++++LYENG
Sbjct: 77 GFSEVRHLAQMMSLDDVFSLEELAGWETRMAEATGISD-LEMTTEVKVDGLSINLLYENG 135
Query: 78 VLVSAATRGDGTTGEDITSNVRTI 7
LV AATRGDG GED+T+N RTI
Sbjct: 136 RLVRAATRGDGYVGEDVTANARTI 159
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Frame = -2
Query: 446 TTTDR---TANDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 276
TT DR + + Y+ D+P + DA+YDR+ RE+ E+E ++P+L DSPT V
Sbjct: 11 TTRDRYNDLVDRINEARAAYYDRDSPTLADADYDRMYREVEEIEERYPQLRGADSPTMSV 70
Query: 275 GAA 267
G +
Sbjct: 71 GGS 73
>UniRef50_A5FRL4 Cluster: DNA ligase, NAD-dependent; n=3;
Dehalococcoides|Rep: DNA ligase, NAD-dependent -
Dehalococcoides sp. BAV1
Length = 680
Score = 83.8 bits (198), Expect = 4e-15
Identities = 36/56 (64%), Positives = 43/56 (76%)
Frame = -2
Query: 422 DVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAA 255
++ H LY+V D PEI DA+YD L+R L+ELE HPEL+TPDSPTQRVGA PL A
Sbjct: 17 EINRHNQLYYVQDNPEISDAQYDTLIRRLKELEEAHPELVTPDSPTQRVGAEPLKA 72
Score = 74.5 bits (175), Expect = 2e-12
Identities = 38/85 (44%), Positives = 52/85 (61%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 76
F + H P+LSL N F + A+ +RV+ +L N CE K+DGLAV++ Y NG
Sbjct: 73 FGIVNHPYPLLSLANAFSDTELEAWYQRVK-KLLGNIPFQIDCEPKMDGLAVALTYRNGK 131
Query: 75 LVSAATRGDGTTGEDITSNVRTIRA 1
+ ATRGDG GE+IT N+RTI +
Sbjct: 132 FATGATRGDGFQGENITRNLRTIHS 156
>UniRef50_Q2N9V6 Cluster: DNA ligase; n=1; Erythrobacter litoralis
HTCC2594|Rep: DNA ligase - Erythrobacter litoralis
(strain HTCC2594)
Length = 736
Score = 83.4 bits (197), Expect = 5e-15
Identities = 44/89 (49%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Frame = -1
Query: 267 AAGGFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK--NNEKVTWCCELKLDGLAVSI 94
AA S++ HEV M+SLDN F +E F RV+ L +E + + E K+DGL+ S+
Sbjct: 76 AASPLSKVTHEVRMMSLDNAFADEEVAEFVARVRRYLNIGEDEAIAFTAEDKIDGLSCSL 135
Query: 93 LYENGVLVSAATRGDGTTGEDITSNVRTI 7
YENG LV AATRGDG GED+T NV I
Sbjct: 136 RYENGKLVRAATRGDGQVGEDVTPNVAHI 164
Score = 62.9 bits (146), Expect = 8e-09
Identities = 29/60 (48%), Positives = 37/60 (61%)
Frame = -2
Query: 434 RTANDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAA 255
R A + H+ LYH DAPEI D EYD L+R ELE P L+ DSP+++VG A A+
Sbjct: 19 RLARQIAKHDRLYHAEDAPEITDQEYDALVRRNAELEAAFPHLVREDSPSRKVGHAVAAS 78
>UniRef50_Q7NR81 Cluster: DNA ligase; n=7; Proteobacteria|Rep: DNA
ligase - Chromobacterium violaceum
Length = 821
Score = 83.0 bits (196), Expect = 7e-15
Identities = 47/95 (49%), Positives = 57/95 (60%), Gaps = 10/95 (10%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDE----------ESFLAFNKRVQDRLKNNEKVTWCCELKLDGL 106
F + H VPMLSL N F + + F++RV+ L E V + E K DGL
Sbjct: 88 FVSVVHAVPMLSLSNAFSDMQLTDPAERHSELIQFDERVRKGLDAAE-VEYATEPKFDGL 146
Query: 105 AVSILYENGVLVSAATRGDGTTGEDITSNVRTIRA 1
A+S+LYENGVL AATRGDG GE +T NVRTIRA
Sbjct: 147 AISLLYENGVLTRAATRGDGVAGEQVTENVRTIRA 181
Score = 74.1 bits (174), Expect = 3e-12
Identities = 32/46 (69%), Positives = 37/46 (80%)
Frame = -2
Query: 398 YHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPL 261
Y+V+DAP +PDAEYDRL REL+ LE HPEL DSPT+RVG APL
Sbjct: 40 YYVLDAPTVPDAEYDRLFRELQALEEAHPELAVSDSPTRRVGGAPL 85
>UniRef50_Q6YQD6 Cluster: DNA ligase; n=3; Candidatus
Phytoplasma|Rep: DNA ligase - Onion yellows phytoplasma
Length = 671
Score = 83.0 bits (196), Expect = 7e-15
Identities = 40/84 (47%), Positives = 57/84 (67%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 76
FS I+H+ PM+SL NVF+ E AF R+ ++ +T ELK+DG+A+S+ Y+ G+
Sbjct: 73 FSTIKHKTPMMSLGNVFNLEEIKAFYDRIVKKIPTFSLLT---ELKIDGVAISLKYQKGI 129
Query: 75 LVSAATRGDGTTGEDITSNVRTIR 4
LV A TRG+G GEDIT N +TI+
Sbjct: 130 LVQALTRGNGIWGEDITKNAQTIK 153
Score = 46.8 bits (106), Expect = 5e-04
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = -2
Query: 404 YLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 273
Y Y+ + P++ D +YD L++EL LET++P+ P SPT ++G
Sbjct: 23 YQYYNLSNPDLSDQQYDALLKELINLETRYPQFKLPYSPTLKIG 66
>UniRef50_Q7NMN8 Cluster: DNA ligase; n=1; Gloeobacter
violaceus|Rep: DNA ligase - Gloeobacter violaceus
Length = 668
Score = 82.6 bits (195), Expect = 9e-15
Identities = 40/88 (45%), Positives = 55/88 (62%)
Frame = -1
Query: 264 AGGFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYE 85
A F + H VPM SL+N F + + +R+ + + + CELK+DG A ++ YE
Sbjct: 72 ASAFVSVTHRVPMFSLENAFSQAELEKWGERLLRAI--GPGLEFICELKIDGSATALSYE 129
Query: 84 NGVLVSAATRGDGTTGEDITSNVRTIRA 1
+GVLV ATRGDG GE+IT N+RTIRA
Sbjct: 130 DGVLVRGATRGDGVEGEEITQNLRTIRA 157
Score = 70.1 bits (164), Expect = 5e-11
Identities = 32/61 (52%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Frame = -2
Query: 434 RTANDVRHH-EYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLA 258
RT + H Y Y+V+DAPE+ DA YD+ REL +LE+++PEL++PDSPT+RVG P +
Sbjct: 14 RTLRALLHRWGYAYYVLDAPEVSDAIYDQHYRELVDLESRYPELVSPDSPTRRVGERPAS 73
Query: 257 A 255
A
Sbjct: 74 A 74
>UniRef50_Q2S459 Cluster: DNA ligase, NAD-dependent; n=1;
Salinibacter ruber DSM 13855|Rep: DNA ligase,
NAD-dependent - Salinibacter ruber (strain DSM 13855)
Length = 690
Score = 82.6 bits (195), Expect = 9e-15
Identities = 40/81 (49%), Positives = 55/81 (67%)
Frame = -1
Query: 246 IRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVS 67
+ H PMLSL V++E+ F + ++ L E VT+ E K DGLAV ++YE+G LV
Sbjct: 90 VTHPAPMLSLKAVYEEDEVRNFAETCREEL-GRETVTYIAEPKFDGLAVELIYEDGRLVQ 148
Query: 66 AATRGDGTTGEDITSNVRTIR 4
ATRGDG TGE+IT+NV+TI+
Sbjct: 149 GATRGDGETGEEITANVKTIK 169
Score = 70.9 bits (166), Expect = 3e-11
Identities = 29/49 (59%), Positives = 39/49 (79%)
Frame = -2
Query: 419 VRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 273
+RHH Y Y+V+DAP + DAEYDRL ++L+ LE ++P L TPDSPT +VG
Sbjct: 32 LRHHNYRYYVLDAPVVSDAEYDRLFQQLQTLEAEYPVLQTPDSPTHQVG 80
>UniRef50_P49421 Cluster: DNA ligase; n=8; Bacteria|Rep: DNA ligase
- Rhodothermus marinus (Rhodothermus obamensis)
Length = 712
Score = 82.6 bits (195), Expect = 9e-15
Identities = 43/91 (47%), Positives = 58/91 (63%), Gaps = 4/91 (4%)
Frame = -1
Query: 261 GGFSQIRHEVPMLSLDNVFDEESFLAFNKR----VQDRLKNNEKVTWCCELKLDGLAVSI 94
G F ++RH P+LSL+N F EE + +R + +RL + ELK+DGLA+++
Sbjct: 102 GRFEKVRHPEPLLSLNNAFGEEDVRVWYERCCRMLAERLGQPVQPAVTAELKIDGLAMAL 161
Query: 93 LYENGVLVSAATRGDGTTGEDITSNVRTIRA 1
YENGVL ATRGDG GE++T NVRTI A
Sbjct: 162 TYENGVLSVGATRGDGIEGENVTQNVRTIPA 192
Score = 77.4 bits (182), Expect = 3e-13
Identities = 33/53 (62%), Positives = 41/53 (77%)
Frame = -2
Query: 419 VRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPL 261
+ H Y Y+V+D P IPDA+YD LM+ LR+LE + PEL+TPDSPTQRVG PL
Sbjct: 49 LNQHAYRYYVLDNPLIPDADYDLLMQALRKLEARFPELVTPDSPTQRVGGPPL 101
>UniRef50_P47496 Cluster: DNA ligase; n=4; Mycoplasma|Rep: DNA
ligase - Mycoplasma genitalium
Length = 659
Score = 82.6 bits (195), Expect = 9e-15
Identities = 38/89 (42%), Positives = 57/89 (64%)
Frame = -1
Query: 267 AAGGFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILY 88
A GF ++ H PMLSL+N F + F + + N K + E K+DG+++S+ Y
Sbjct: 66 AVKGFKKLNHNSPMLSLENAFSTKEIANFIDNIN--FQTNSKNEFVVEPKIDGVSISLTY 123
Query: 87 ENGVLVSAATRGDGTTGEDITSNVRTIRA 1
+NGVLV A TRGDG+ GED+ +NV+TI++
Sbjct: 124 KNGVLVHALTRGDGSVGEDVLNNVKTIKS 152
Score = 60.5 bits (140), Expect = 4e-08
Identities = 26/51 (50%), Positives = 37/51 (72%)
Frame = -2
Query: 425 NDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 273
N +++++Y Y+V+ P I D EYD L + L++LE HP+LI DSPTQRVG
Sbjct: 13 NLIKNYDYHYYVLSEPLIDDFEYDMLYKSLQQLEKDHPDLIQIDSPTQRVG 63
>UniRef50_A1TR21 Cluster: DNA ligase, NAD-dependent; n=1; Acidovorax
avenae subsp. citrulli AAC00-1|Rep: DNA ligase,
NAD-dependent - Acidovorax avenae subsp. citrulli
(strain AAC00-1)
Length = 732
Score = 82.2 bits (194), Expect = 1e-14
Identities = 46/90 (51%), Positives = 58/90 (64%), Gaps = 5/90 (5%)
Frame = -1
Query: 258 GFSQIRHEVPMLSLDNVFDEESFLA--FNKRVQDRLK---NNEKVTWCCELKLDGLAVSI 94
G + +RH VPMLS+ D E+ A F+ RV+ LK + V + E K DGLA+S+
Sbjct: 84 GLTPVRHTVPMLSIRTETDTEASGAETFDARVRRELKLAPDAPPVEYVAEPKFDGLAMSL 143
Query: 93 LYENGVLVSAATRGDGTTGEDITSNVRTIR 4
YENG LV AATRGDG GED+T N+RTIR
Sbjct: 144 RYENGRLVQAATRGDGEVGEDVTHNIRTIR 173
Score = 71.3 bits (167), Expect = 2e-11
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = -2
Query: 398 YHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 276
Y+V+DAP +PDAEYDR+ + L+ LET HPEL+TPDSPTQRV
Sbjct: 37 YYVLDAPTVPDAEYDRVFQALQALETAHPELVTPDSPTQRV 77
>UniRef50_P26996 Cluster: DNA ligase; n=24; Bacteria|Rep: DNA ligase
- Thermus thermophilus (strain HB8 / ATCC 27634 / DSM
579)
Length = 676
Score = 81.0 bits (191), Expect = 3e-14
Identities = 36/58 (62%), Positives = 46/58 (79%)
Frame = -2
Query: 419 VRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAASAR 246
+R+H Y Y+V+ PEI DAEYDRL+REL+ELE + PEL +PDSPT +VGA PL A+ R
Sbjct: 17 IRYHNYRYYVLADPEISDAEYDRLLRELKELEERFPELKSPDSPTLQVGARPLEATFR 74
Score = 79.0 bits (186), Expect = 1e-13
Identities = 37/83 (44%), Positives = 51/83 (61%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 76
F +RH M SLDN F+ + AF +R++ L + E K+DGL+V++ YE GV
Sbjct: 73 FRPVRHPTRMYSLDNAFNLDELKAFEERIERALGRKGPFAYTVEHKVDGLSVNLYYEEGV 132
Query: 75 LVSAATRGDGTTGEDITSNVRTI 7
LV ATRGDG GE++T N+ TI
Sbjct: 133 LVYGATRGDGEVGEEVTQNLLTI 155
>UniRef50_Q4FPL3 Cluster: DNA ligase; n=2; Candidatus Pelagibacter
ubique|Rep: DNA ligase - Pelagibacter ubique
Length = 676
Score = 80.6 bits (190), Expect = 4e-14
Identities = 37/86 (43%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQD--RLKNNEKVTWCCELKLDGLAVSILYEN 82
F +I+H+VPMLSL N F+EE F K++ + LK+ + + E K+DG++ S++Y +
Sbjct: 72 FQKIKHKVPMLSLGNAFNEEDLKNFEKKIINFLSLKDVNTIEYSAEPKIDGISASLIYID 131
Query: 81 GVLVSAATRGDGTTGEDITSNVRTIR 4
G L +RGDG GEDIT N++TI+
Sbjct: 132 GKLTKGLSRGDGNEGEDITQNLKTIK 157
Score = 36.3 bits (80), Expect = 0.77
Identities = 17/51 (33%), Positives = 32/51 (62%)
Frame = -2
Query: 416 RHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAP 264
RH+++ Y+ + P + D E+D L +++ +LE K+ L + SPT+ +G P
Sbjct: 19 RHNKH-YYDKNKPIVSDQEFDLLKKDIIDLERKYKFLKSEYSPTKSIGFKP 68
>UniRef50_Q1NYF9 Cluster: DNA ligase; n=1; delta proteobacterium
MLMS-1|Rep: DNA ligase - delta proteobacterium MLMS-1
Length = 678
Score = 80.6 bits (190), Expect = 4e-14
Identities = 39/88 (44%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Frame = -1
Query: 267 AAGGFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK-NNEKVTWCCELKLDGLAVSIL 91
AA F+ +RH VPMLSL+N F E F R++ L +++ + + E KLDGLAV ++
Sbjct: 75 AAEQFAPVRHAVPMLSLENAFAEAELYDFENRLRRFLNLDDQPIAYYAEPKLDGLAVELV 134
Query: 90 YENGVLVSAATRGDGTTGEDITSNVRTI 7
YE G +TRGDG GE+I++N++TI
Sbjct: 135 YEQGFFTLGSTRGDGLVGENISANLKTI 162
Score = 71.7 bits (168), Expect = 2e-11
Identities = 33/63 (52%), Positives = 46/63 (73%), Gaps = 2/63 (3%)
Frame = -2
Query: 419 VRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG--AAPLAASAR 246
+ +H + Y+V+D PE+ D EYDRL REL ELE++ PEL+T DSP++RVG AA A R
Sbjct: 24 IAYHNHRYYVLDDPELSDGEYDRLFRELEELESRWPELVTADSPSRRVGGAAAEQFAPVR 83
Query: 245 YAM 237
+A+
Sbjct: 84 HAV 86
>UniRef50_A5TVL5 Cluster: DNA ligase (NAD(+)); n=5; Fusobacterium
nucleatum|Rep: DNA ligase (NAD(+)) - Fusobacterium
nucleatum subsp. polymorphum ATCC 10953
Length = 696
Score = 80.6 bits (190), Expect = 4e-14
Identities = 34/83 (40%), Positives = 54/83 (65%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 76
F ++ H PMLSL N ++ + F +R++ ++ +++ +C E+KLDGL++S+ Y G
Sbjct: 94 FKKVEHAHPMLSLANSYNIGEIVDFIERIKKKISKEQELKYCLEVKLDGLSISLTYRQGK 153
Query: 75 LVSAATRGDGTTGEDITSNVRTI 7
LV A TRGDG GED+T N+ I
Sbjct: 154 LVRAVTRGDGLIGEDVTENILEI 176
Score = 37.1 bits (82), Expect = 0.44
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -2
Query: 374 IPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 267
I D E+D L++EL LE K+P+ SPT VGA+
Sbjct: 53 ISDYEFDILLKELESLEEKYPQYKETSSPTTSVGAS 88
>UniRef50_A1SMA5 Cluster: DNA ligase, NAD-dependent precursor; n=1;
Nocardioides sp. JS614|Rep: DNA ligase, NAD-dependent
precursor - Nocardioides sp. (strain BAA-499 / JS614)
Length = 752
Score = 80.2 bits (189), Expect = 5e-14
Identities = 44/83 (53%), Positives = 53/83 (63%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 76
F+ H M SLDN F E A+ R+ R E CELK+DGLA+++LYE G
Sbjct: 129 FTSHPHLRRMESLDNAFSVEEVEAWYARL--RRDGVEDPALLCELKVDGLAINLLYEEGR 186
Query: 75 LVSAATRGDGTTGEDITSNVRTI 7
LV A TRGDGTTGED+TSNV+TI
Sbjct: 187 LVRALTRGDGTTGEDVTSNVKTI 209
Score = 63.7 bits (148), Expect = 4e-09
Identities = 28/54 (51%), Positives = 37/54 (68%)
Frame = -2
Query: 428 ANDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 267
A ++ + Y+V+D+P I DA++DR MR L LE + PEL TPDSPTQ VG A
Sbjct: 71 AEEIEEARWRYYVLDSPTIDDADFDRRMRRLEALEEEFPELRTPDSPTQTVGGA 124
>UniRef50_Q99540 Cluster: Ligase-like protein; n=21; cellular
organisms|Rep: Ligase-like protein - Homo sapiens
(Human)
Length = 454
Score = 79.8 bits (188), Expect = 6e-14
Identities = 40/86 (46%), Positives = 58/86 (67%)
Frame = -1
Query: 258 GFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENG 79
G +++ H PMLSL +VF E A+++R L + + ELK+DGLAV++ Y +G
Sbjct: 82 GLAKVEHPAPMLSLGDVFSLEELAAWDERTTKSL--GFQSPYNLELKIDGLAVALTYVDG 139
Query: 78 VLVSAATRGDGTTGEDITSNVRTIRA 1
LV A+TRG+GT GED+T NV+TI+A
Sbjct: 140 RLVQASTRGNGTIGEDVTRNVKTIKA 165
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/52 (42%), Positives = 29/52 (55%)
Frame = -2
Query: 422 DVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 267
D+ + Y+ DAP + D YD L L LE+ P+ +T DSPTQ VG A
Sbjct: 26 DLTEYGVAYYEQDAPLVEDHVYDALYARLVALESAFPQFVTQDSPTQNVGGA 77
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 78.6 bits (185), Expect = 1e-13
Identities = 41/58 (70%), Positives = 45/58 (77%), Gaps = 7/58 (12%)
Frame = +3
Query: 540 HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVIAK-----RPAP--IALPNSCAPEWR 692
HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVI++ RP+ +L APEWR
Sbjct: 5 HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVISEEARTDRPSQQLRSLKWRMAPEWR 62
>UniRef50_A3D5Y3 Cluster: DNA ligase (NAD(+)); n=1; Shewanella
baltica OS155|Rep: DNA ligase (NAD(+)) - Shewanella
baltica OS155
Length = 145
Score = 78.6 bits (185), Expect = 1e-13
Identities = 40/64 (62%), Positives = 46/64 (71%)
Frame = -1
Query: 267 AAGGFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILY 88
A F QI H PMLSLDN FDE F AF+KRV D++ +V++CCE KLDGLAVSILY
Sbjct: 81 ALAKFDQITHLKPMLSLDNAFDEADFSAFHKRVTDKV---GEVSFCCEPKLDGLAVSILY 137
Query: 87 ENGV 76
NGV
Sbjct: 138 RNGV 141
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/54 (55%), Positives = 36/54 (66%)
Frame = -2
Query: 419 VRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLA 258
+ H Y+V DAP I D+EYDRLM+ L +LE +P LI DSPTQRVG LA
Sbjct: 30 LNEHNIRYYVDDAPSITDSEYDRLMQRLLKLEALYPHLIVADSPTQRVGGLALA 83
>UniRef50_Q8G830 Cluster: DNA ligase; n=4; Bifidobacterium|Rep: DNA
ligase - Bifidobacterium longum
Length = 920
Score = 78.2 bits (184), Expect = 2e-13
Identities = 40/85 (47%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK--NNEKVTWCCELKLDGLAVSILYEN 82
F+ +RH M+SLD+VF E + V L ++ + CE+K+DGLA++++Y N
Sbjct: 128 FASVRHPSRMMSLDDVFSIEELKDWYDSVIRDLDWPESKPLPMSCEVKIDGLALNLIYRN 187
Query: 81 GVLVSAATRGDGTTGEDITSNVRTI 7
GVL TRGDG TGEDIT NVRTI
Sbjct: 188 GVLEQGLTRGDGVTGEDITLNVRTI 212
Score = 46.8 bits (106), Expect = 5e-04
Identities = 24/56 (42%), Positives = 29/56 (51%)
Frame = -2
Query: 434 RTANDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 267
R A V + Y++ D+P DA YD MR L LE P L P SPT RVG +
Sbjct: 68 RVAAWVESDQIAYYIDDSPVSSDAAYDARMRCLERLEAAFPSLDNPQSPTHRVGGS 123
>UniRef50_Q6MAB5 Cluster: DNA ligase; n=1; Candidatus Protochlamydia
amoebophila UWE25|Rep: DNA ligase - Protochlamydia
amoebophila (strain UWE25)
Length = 665
Score = 78.2 bits (184), Expect = 2e-13
Identities = 36/84 (42%), Positives = 53/84 (63%)
Frame = -1
Query: 258 GFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENG 79
GF + H PMLSL N + +E F KR+Q +L +V + ELK+DG+A++ +YE G
Sbjct: 68 GFKTVAHRTPMLSLANTYSKEEIEDFIKRLQ-KLVGKRQVEFSVELKMDGIAITAIYEQG 126
Query: 78 VLVSAATRGDGTTGEDITSNVRTI 7
+ TRG+G G+DIT+N+R I
Sbjct: 127 IFKRGITRGNGKRGDDITTNMRMI 150
Score = 56.8 bits (131), Expect = 5e-07
Identities = 24/60 (40%), Positives = 38/60 (63%)
Frame = -2
Query: 455 INRTTTDRTANDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 276
I + ++ +++ HH LY++ P I D E+D L+++L E+E HPE IT SP+QRV
Sbjct: 2 ITQKDYEKLCHEIWHHNKLYYIEHQPIISDEEFDALLKKLEEIERSHPEWITEFSPSQRV 61
>UniRef50_Q72BM7 Cluster: DNA ligase, NAD-dependent; n=5;
Desulfovibrionaceae|Rep: DNA ligase, NAD-dependent -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 799
Score = 77.4 bits (182), Expect = 3e-13
Identities = 36/85 (42%), Positives = 54/85 (63%)
Frame = -1
Query: 258 GFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENG 79
G + H + M SLDN F + + AF +R+ + L + WC + K+DGLA+ ++YENG
Sbjct: 104 GLEKQAHTLRMYSLDNAFSRDEWGAFIQRMYNALPDAPSAFWC-DPKMDGLALEVIYENG 162
Query: 78 VLVSAATRGDGTTGEDITSNVRTIR 4
V SA TRG+G GE +T+ +RT+R
Sbjct: 163 VFTSALTRGNGEVGEVVTAAMRTVR 187
Score = 60.9 bits (141), Expect = 3e-08
Identities = 31/61 (50%), Positives = 36/61 (59%)
Frame = -2
Query: 422 DVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAASARY 243
D+ H LY+ +D PEI DAEYD L REL LET+ P L SPTQRVG L +
Sbjct: 49 DLERHNRLYYELDTPEISDAEYDALYRELVGLETRWPALRDEASPTQRVGGEVLEGLEKQ 108
Query: 242 A 240
A
Sbjct: 109 A 109
>UniRef50_Q26BQ5 Cluster: DNA ligase; n=2; Flavobacteria|Rep: DNA
ligase - Flavobacteria bacterium BBFL7
Length = 684
Score = 77.4 bits (182), Expect = 3e-13
Identities = 37/85 (43%), Positives = 57/85 (67%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 76
F+ I+H M SLDN + E + KR++ ++ + E + + CELK DG ++S+ YENG
Sbjct: 69 FNTIKHINRMYSLDNSYSIEDLRDWEKRIK-KIVDGE-IQYTCELKYDGASISLHYENGK 126
Query: 75 LVSAATRGDGTTGEDITSNVRTIRA 1
V A TRGDG G+++T+NVRTI++
Sbjct: 127 FVQAVTRGDGNQGDEVTANVRTIKS 151
Score = 52.8 bits (121), Expect = 8e-06
Identities = 22/51 (43%), Positives = 32/51 (62%)
Frame = -2
Query: 425 NDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 273
+++R H Y Y+V D P I D E+D+ + +L+ LE HPE SP+ RVG
Sbjct: 12 DELREHNYNYYVNDNPTISDFEFDKKLEQLKTLEAAHPEFYDATSPSVRVG 62
>UniRef50_P63974 Cluster: DNA ligase; n=21; Actinomycetales|Rep: DNA
ligase - Mycobacterium bovis
Length = 691
Score = 76.6 bits (180), Expect = 6e-13
Identities = 38/86 (44%), Positives = 52/86 (60%)
Frame = -1
Query: 264 AGGFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYE 85
A F + H MLSLDN F + A+ R+ + + + CELK+DG+A+S++Y
Sbjct: 77 ATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEV--GDAAHYLCELKIDGVALSLVYR 134
Query: 84 NGVLVSAATRGDGTTGEDITSNVRTI 7
G L A+TRGDG TGED+T N RTI
Sbjct: 135 EGRLTRASTRGDGRTGEDVTLNARTI 160
Score = 74.9 bits (176), Expect = 2e-12
Identities = 34/57 (59%), Positives = 41/57 (71%)
Frame = -2
Query: 428 ANDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLA 258
A +VR H++ Y+V DAP I DAE+D L+R L LE +HPEL TPDSPTQ VG A A
Sbjct: 21 AEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRTPDSPTQLVGGAGFA 77
>UniRef50_Q2GDR2 Cluster: DNA ligase, NAD-dependent; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: DNA ligase,
NAD-dependent - Neorickettsia sennetsu (strain Miyayama)
Length = 670
Score = 76.2 bits (179), Expect = 8e-13
Identities = 36/87 (41%), Positives = 54/87 (62%)
Frame = -1
Query: 267 AAGGFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILY 88
A+ F +++H PMLSL N+F EE + + ++ + L + + CE K+DG++ S Y
Sbjct: 61 ASEKFQKVKHLSPMLSLRNIFSEEELVEYIEKTKRFLNLKSALEFLCEPKIDGVSFSARY 120
Query: 87 ENGVLVSAATRGDGTTGEDITSNVRTI 7
NG LVS ATRGDG GE+I N++ I
Sbjct: 121 VNGKLVSCATRGDGKIGENIIDNMKVI 147
>UniRef50_Q4A5J6 Cluster: DNA ligase; n=1; Mycoplasma synoviae
53|Rep: DNA ligase - Mycoplasma synoviae (strain 53)
Length = 697
Score = 75.8 bits (178), Expect = 1e-12
Identities = 37/84 (44%), Positives = 51/84 (60%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 76
F + +H MLSLD + E +F + + KN E + E K+DGL++SI Y+NG
Sbjct: 72 FKKTKHNKEMLSLDKAYKESEIFSFYENFT-QYKNLENFGFSLEPKIDGLSISIHYDNGK 130
Query: 75 LVSAATRGDGTTGEDITSNVRTIR 4
+ A TRGDGTTGED++ NV IR
Sbjct: 131 FIKAITRGDGTTGEDVSENVFQIR 154
Score = 57.2 bits (132), Expect = 4e-07
Identities = 25/52 (48%), Positives = 35/52 (67%)
Frame = -2
Query: 425 NDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 270
N ++H +LY+ +DAPE+ D YD L EL ELE K+P L+ DS T+ +GA
Sbjct: 15 NYLKHLNHLYYDLDAPEVDDKTYDSLYNELLELEAKYPSLVLEDSVTKIIGA 66
>UniRef50_A7H8A2 Cluster: DNA ligase, NAD-dependent; n=3;
Proteobacteria|Rep: DNA ligase, NAD-dependent -
Anaeromyxobacter sp. Fw109-5
Length = 699
Score = 75.4 bits (177), Expect = 1e-12
Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRL--KNNEKVTWCCELKLDGLAVSILYEN 82
F ++ H PMLSL N+ + F+ RV L + +V + E KLDGLAV ++YE
Sbjct: 76 FERVVHREPMLSLGNIQSDGELDEFDARVHRLLGLAGDVQVGYVAEPKLDGLAVELVYEG 135
Query: 81 GVLVSAATRGDGTTGEDITSNVRTI 7
G LV +TRGDG GED+T+N+RT+
Sbjct: 136 GRLVQGSTRGDGVNGEDVTANLRTV 160
Score = 70.5 bits (165), Expect = 4e-11
Identities = 30/48 (62%), Positives = 37/48 (77%)
Frame = -2
Query: 407 EYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAP 264
++ Y+V+D P + DAEYDRL+REL E+E HPEL T DSPTQRV AP
Sbjct: 25 DHAYYVLDRPVLADAEYDRLVRELAEIEAAHPELATSDSPTQRVSGAP 72
>UniRef50_P28719 Cluster: DNA ligase; n=3; Alphaproteobacteria|Rep:
DNA ligase - Zymomonas mobilis
Length = 731
Score = 75.4 bits (177), Expect = 1e-12
Identities = 42/84 (50%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Frame = -1
Query: 249 QIRHEVPMLSLDNVF---DEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENG 79
+I H MLSLDN F D E FL +R + LK N+ V E K+DGL+ S+ YE G
Sbjct: 99 KIAHRAAMLSLDNGFLDQDVEDFLGRVRRFFN-LKENQAVICTVEPKIDGLSCSLRYEKG 157
Query: 78 VLVSAATRGDGTTGEDITSNVRTI 7
+L A TRGDG GED+T NVR I
Sbjct: 158 ILTQAVTRGDGVIGEDVTPNVRVI 181
Score = 64.1 bits (149), Expect = 3e-09
Identities = 26/58 (44%), Positives = 40/58 (68%)
Frame = -2
Query: 437 DRTANDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAP 264
+R A + H+++LYH D P +PD+EYD L+ R +E P+LI PDSP+++VG+ P
Sbjct: 36 ERLAKLISHYDHLYHDKDNPAVPDSEYDALVLRNRRIEQFFPDLIRPDSPSKKVGSRP 93
>UniRef50_Q9PR23 Cluster: DNA ligase; n=1; Ureaplasma parvum|Rep:
DNA ligase - Ureaplasma parvum (Ureaplasma urealyticum
biotype 1)
Length = 673
Score = 74.5 bits (175), Expect = 2e-12
Identities = 35/84 (41%), Positives = 57/84 (67%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 76
F++++H+ PMLSL N F+++ F++ Q+ + + + E K+DGL++SI+Y+N
Sbjct: 70 FNKVKHKRPMLSLSNAFNDDDLKKFDQDNQNA--SVDLKGYVVEPKIDGLSISIIYKNAK 127
Query: 75 LVSAATRGDGTTGEDITSNVRTIR 4
L A TRGDG GED+TSN+ TI+
Sbjct: 128 LHQAITRGDGINGEDVTSNILTIK 151
Score = 52.0 bits (119), Expect = 1e-05
Identities = 22/44 (50%), Positives = 31/44 (70%)
Frame = -2
Query: 404 YLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 273
Y Y+V+D P +PD YD+ MREL ELE +P+ T +SP+ +VG
Sbjct: 20 YEYYVLDDPSVPDHVYDQTMRELIELENNYPQFKTNNSPSVKVG 63
>UniRef50_Q7NAF8 Cluster: Lig; n=1; Mycoplasma gallisepticum|Rep:
Lig - Mycoplasma gallisepticum
Length = 717
Score = 74.5 bits (175), Expect = 2e-12
Identities = 34/84 (40%), Positives = 55/84 (65%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 76
F +++H+ MLSL N F+ E L FN+ + ++ E + E K+DGL++S++Y +GV
Sbjct: 77 FIKVKHDYLMLSLGNCFNFEELLNFNENIA-KISKQEDNPYVLEPKIDGLSISLIYLDGV 135
Query: 75 LVSAATRGDGTTGEDITSNVRTIR 4
L A TRGDG GE + +N++TI+
Sbjct: 136 LSEALTRGDGVFGESVIANIKTIK 159
Score = 43.6 bits (98), Expect = 0.005
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = -2
Query: 407 EYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 267
E+ Y+V+ P + D YD R L E K+P+ + SPTQRVG++
Sbjct: 26 EHEYYVLSNPSVSDEVYDNTYRTLLGYERKYPQYVLSYSPTQRVGSS 72
>UniRef50_O33102 Cluster: DNA ligase; n=11; Actinomycetales|Rep: DNA
ligase - Mycobacterium leprae
Length = 694
Score = 74.5 bits (175), Expect = 2e-12
Identities = 37/83 (44%), Positives = 51/83 (61%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 76
F H M SLDN F + A+ R++ + N+ + CELK+DG+A+S++Y +G
Sbjct: 80 FVATEHLERMFSLDNAFSGDELNAWVTRIRAEIGNDAH--YLCELKIDGVALSLVYRDGR 137
Query: 75 LVSAATRGDGTTGEDITSNVRTI 7
L A TRGDG TGED+T N RTI
Sbjct: 138 LTRATTRGDGRTGEDVTLNARTI 160
Score = 69.7 bits (163), Expect = 7e-11
Identities = 31/56 (55%), Positives = 39/56 (69%)
Frame = -2
Query: 434 RTANDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 267
+ +VR H++ Y+V DAP I DAE+D L+ L LE +HPEL TPDSPTQ VG A
Sbjct: 19 KLTEEVREHQFRYYVRDAPIISDAEFDALLDRLTVLEEQHPELCTPDSPTQLVGGA 74
>UniRef50_Q28PE1 Cluster: DNA ligase; n=20; Rhodobacteraceae|Rep:
DNA ligase - Jannaschia sp. (strain CCS1)
Length = 752
Score = 73.3 bits (172), Expect = 5e-12
Identities = 42/89 (47%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Frame = -1
Query: 264 AGGFSQIRHEVPMLSLDNVFDE---ESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSI 94
A GFS++ H MLSL N FD F+A +R + L + + E K+DGL++S+
Sbjct: 83 AEGFSKLTHTQRMLSLANAFDAGDVPDFVAGIRRYLN-LGAEADLPFTAEPKIDGLSLSL 141
Query: 93 LYENGVLVSAATRGDGTTGEDITSNVRTI 7
YE+G LVSAATRGDG GE++T+N RTI
Sbjct: 142 RYEDGQLVSAATRGDGAIGENVTANARTI 170
Score = 53.6 bits (123), Expect = 5e-06
Identities = 23/45 (51%), Positives = 30/45 (66%)
Frame = -2
Query: 398 YHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAP 264
YH DAP++ DA+YD L RE +E P+L DSP+ +VGAAP
Sbjct: 38 YHAADAPDLSDADYDALKRENAAIEAAFPDLKRADSPSDQVGAAP 82
>UniRef50_Q5UY84 Cluster: DNA ligase; n=4; Halobacteriaceae|Rep: DNA
ligase - Haloarcula marismortui (Halobacterium
marismortui)
Length = 691
Score = 72.9 bits (171), Expect = 7e-12
Identities = 38/80 (47%), Positives = 50/80 (62%)
Frame = -1
Query: 246 IRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVS 67
+ H M S+D +E F+ RV++ L + V + CE K DGL+V I+YE+GV
Sbjct: 99 VEHVARMGSIDQGGEEADVREFDSRVRNGLDGD--VQYFCEPKFDGLSVEIVYEDGVYQR 156
Query: 66 AATRGDGTTGEDITSNVRTI 7
AATRGDG GED+T NVRTI
Sbjct: 157 AATRGDGEVGEDVTENVRTI 176
Score = 51.2 bits (117), Expect = 3e-05
Identities = 27/63 (42%), Positives = 35/63 (55%)
Frame = -2
Query: 449 RTTTDRTANDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 270
R D+ +R+H+Y Y+V + P I D YD L L+ LE+ L T SPTQRVG
Sbjct: 32 REQADQLREALRYHDYRYYVENDPVIGDRAYDALFSRLQRLESAF-NLDTDGSPTQRVGG 90
Query: 269 APL 261
PL
Sbjct: 91 EPL 93
>UniRef50_A6DEF5 Cluster: NAD-dependent DNA ligase LigA; n=1;
Caminibacter mediatlanticus TB-2|Rep: NAD-dependent DNA
ligase LigA - Caminibacter mediatlanticus TB-2
Length = 682
Score = 72.5 bits (170), Expect = 1e-11
Identities = 33/84 (39%), Positives = 55/84 (65%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 76
F + +H M S+++VFD+ F+ + RV+ R N+ ++ E K DG +++++Y+NG
Sbjct: 70 FKKAKHITKMWSMEDVFDKNEFIDWVNRVK-RAIGNDNFSFYIEPKFDGASLNLVYKNGE 128
Query: 75 LVSAATRGDGTTGEDITSNVRTIR 4
L+ A TRGDG GED+T N +TI+
Sbjct: 129 LIRAETRGDGEIGEDVTLNAKTIK 152
Score = 54.4 bits (125), Expect = 3e-06
Identities = 22/60 (36%), Positives = 34/60 (56%)
Frame = -2
Query: 452 NRTTTDRTANDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 273
N + ++ Y Y+V+D P + D EYD+L +E+ E E HP+ + SPTQR+G
Sbjct: 4 NHEEYKKAVETLKKWAYYYYVLDNPLVTDEEYDKLYKEVEEYEKNHPDEVDKTSPTQRIG 63
>UniRef50_Q6KI95 Cluster: NAD(+)-dependent DNA ligase; n=1;
Mycoplasma mobile|Rep: NAD(+)-dependent DNA ligase -
Mycoplasma mobile
Length = 671
Score = 71.7 bits (168), Expect = 2e-11
Identities = 34/84 (40%), Positives = 53/84 (63%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 76
FS+++H+ PMLSL+ + + F + + K + ELK+DGL++S+ Y+NG
Sbjct: 82 FSKVQHQFPMLSLNKAYKFDDLKIFERHIN---KLGFFPNYFLELKIDGLSISLKYDNGN 138
Query: 75 LVSAATRGDGTTGEDITSNVRTIR 4
L+ A TRGDG +GED+T NV I+
Sbjct: 139 LIQALTRGDGISGEDVTENVFQIQ 162
Score = 32.7 bits (71), Expect = 9.5
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -2
Query: 398 YHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 270
Y D P + D+ YD + +L + E ++ L DSPT+ +GA
Sbjct: 34 YFDYDEPLVEDSIYDATLLKLIKFENQYKFLDNSDSPTKNIGA 76
>UniRef50_Q2GLI8 Cluster: DNA ligase, NAD-dependent; n=5;
Anaplasmataceae|Rep: DNA ligase, NAD-dependent -
Anaplasma phagocytophilum (strain HZ)
Length = 677
Score = 71.3 bits (167), Expect = 2e-11
Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Frame = -1
Query: 249 QIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKV--TWCCELKLDGLAVSILYENGV 76
+I H PMLSL+N F + F RV+ L + +V T CE K+DGL+ + LYE G
Sbjct: 75 KIAHREPMLSLENSFTIQDVEKFISRVKRSLNMDPEVSITIACEPKIDGLSFAALYEKGS 134
Query: 75 LVSAATRGDGTTGEDITSNVRTIR 4
L+ ATRG+G GEDIT+ + IR
Sbjct: 135 LIRVATRGNGHLGEDITNTAKVIR 158
Score = 49.6 bits (113), Expect = 8e-05
Identities = 25/52 (48%), Positives = 32/52 (61%)
Frame = -2
Query: 410 HEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAA 255
H+ LYH DAPEI DA+YD L++E REL K PEL + +GA + A
Sbjct: 20 HDVLYHEHDAPEISDAQYDALVQEKRELLEKFPELSAYNDYEGVIGALTVDA 71
>UniRef50_Q7M8A0 Cluster: DNA LIGASE POLYDEOXYRIBONUCLEOTIDE
SYNTHASE [NAD+]; n=9; Epsilonproteobacteria|Rep: DNA
LIGASE POLYDEOXYRIBONUCLEOTIDE SYNTHASE [NAD+] -
Wolinella succinogenes
Length = 650
Score = 70.5 bits (165), Expect = 4e-11
Identities = 36/84 (42%), Positives = 52/84 (61%)
Frame = -1
Query: 258 GFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENG 79
GF + H M SL++VFD ++ +R+ + + T+ C+ K DG ++++LYE G
Sbjct: 67 GFQKASHLERMWSLEDVFDFGELKSWAERLYKQFPH---ATFVCDPKFDGASLNLLYEEG 123
Query: 78 VLVSAATRGDGTTGEDITSNVRTI 7
LV AATRGDG GED+T N RTI
Sbjct: 124 RLVRAATRGDGLIGEDVTQNARTI 147
Score = 56.0 bits (129), Expect = 9e-07
Identities = 25/48 (52%), Positives = 32/48 (66%)
Frame = -2
Query: 404 YLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPL 261
+ Y+V+DAP D EYD+L E E ++PE I P SPTQR+G APL
Sbjct: 18 HAYYVLDAPLATDEEYDQLYHEALAFERQNPERIHPASPTQRIGGAPL 65
>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
Beta-galactosidase - Yersinia pseudotuberculosis
Length = 1066
Score = 70.1 bits (164), Expect = 5e-11
Identities = 30/48 (62%), Positives = 36/48 (75%)
Frame = +2
Query: 539 SLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRT 682
SL +L RRDWENP +TQ +RL AHPPF SWR+ E A+ DRPS Q +T
Sbjct: 14 SLPQILSRRDWENPQITQYHRLEAHPPFHSWRDVESAQKDRPSPQQQT 61
>UniRef50_Q93IZ8 Cluster: DNA ligase; n=2; Streptomyces|Rep: DNA
ligase - Streptomyces coelicolor
Length = 723
Score = 69.7 bits (163), Expect = 7e-11
Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Frame = -1
Query: 264 AGGFSQ--IRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSIL 91
AGG ++ + H VPMLSLDNVF E F + + R+ + E + KLDGLAV+
Sbjct: 96 AGGAAEGDVPHTVPMLSLDNVFSPEEFTVWTASLARRI-DREVTRFSVGPKLDGLAVAAR 154
Query: 90 YENGVLVSAATRGDGTTGEDITSNVRTI 7
Y G L TRGDGT GED++ + T+
Sbjct: 155 YREGRLTRLITRGDGTAGEDVSHAIGTV 182
Score = 43.6 bits (98), Expect = 0.005
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = -2
Query: 455 INRTTTDRTANDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRV 276
++ T + D H Y+ + + D YDRL R + E +HP+ + PDSPT +V
Sbjct: 36 VDATAYAQAVEDAAHAAAAYYAGGSSPLDDDAYDRLARGIAAWEAEHPDEVLPDSPTGKV 95
Query: 275 --GAA 267
GAA
Sbjct: 96 AGGAA 100
>UniRef50_Q0BMQ3 Cluster: DNA ligase (NAD(+)); n=11; Francisella
tularensis|Rep: DNA ligase (NAD(+)) - Francisella
tularensis subsp. holarctica (strain OSU18)
Length = 678
Score = 69.7 bits (163), Expect = 7e-11
Identities = 37/85 (43%), Positives = 50/85 (58%)
Frame = -1
Query: 258 GFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENG 79
GF I+H+ M SL NVF E F +++ ++ CE K+DGLA+SI Y+NG
Sbjct: 84 GFETIKHKKKMTSLANVFSLEELRDFYDKIEYDIELE------CEPKMDGLAISIFYKNG 137
Query: 78 VLVSAATRGDGTTGEDITSNVRTIR 4
A TRGDG GE ++ NV+TIR
Sbjct: 138 KFDYAVTRGDGIQGEKVSENVKTIR 162
Score = 49.2 bits (112), Expect = 1e-04
Identities = 23/60 (38%), Positives = 35/60 (58%)
Frame = -2
Query: 437 DRTANDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLA 258
D+ A+ + YLYH +D P I D++YD+L R L++L +P+ +S RVG LA
Sbjct: 24 DKLADYLSQQSYLYHTLDKPIISDSDYDKLFRLLQDLVNDNPQFKPINSVLDRVGGEVLA 83
>UniRef50_Q8KF74 Cluster: DNA ligase, NAD-dependent; n=11;
Chlorobiaceae|Rep: DNA ligase, NAD-dependent -
Chlorobium tepidum
Length = 674
Score = 69.3 bits (162), Expect = 9e-11
Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVT--WCCELKLDGLAVSILYEN 82
F + H PMLSL N + F RV+ + T + ELK DG+A+S+LY +
Sbjct: 72 FPTVVHRDPMLSLSNTYSIAEVADFCNRVEKLVAAEGGGTPEYVAELKYDGVAISLLYRD 131
Query: 81 GVLVSAATRGDGTTGEDITSNVRTI 7
G+LV +TRGDG G++IT+N+RTI
Sbjct: 132 GLLVCGSTRGDGRQGDEITANLRTI 156
Score = 60.1 bits (139), Expect = 5e-08
Identities = 25/50 (50%), Positives = 36/50 (72%)
Frame = -2
Query: 422 DVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 273
++ H LY++ PEI D E+D+L++ L LE + PEL+TPDSP+QRVG
Sbjct: 16 EIERHNRLYYLEAKPEISDFEFDKLLKRLIMLEKEFPELVTPDSPSQRVG 65
>UniRef50_A6Q433 Cluster: DNA ligase, NAD-dependent; n=11;
Epsilonproteobacteria|Rep: DNA ligase, NAD-dependent -
Nitratiruptor sp. (strain SB155-2)
Length = 660
Score = 69.3 bits (162), Expect = 9e-11
Identities = 33/83 (39%), Positives = 54/83 (65%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 76
F +I+H M S+++VF++ + +RV + + + E K DG +++++YENG+
Sbjct: 70 FKKIKHLSKMWSMEDVFNQREMHEWLERVYKNAGRKD-LQFYIEPKFDGASLNLIYENGL 128
Query: 75 LVSAATRGDGTTGEDITSNVRTI 7
L SAATRGDG GED+T+N +TI
Sbjct: 129 LKSAATRGDGEVGEDVTANAKTI 151
Score = 66.5 bits (155), Expect = 6e-10
Identities = 27/47 (57%), Positives = 34/47 (72%)
Frame = -2
Query: 404 YLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAP 264
Y Y+V+D PE+PD YD+L RE+ E E HP+ I P SPTQR+GA P
Sbjct: 20 YAYYVLDNPEVPDEVYDKLYREVEEYEKAHPDQIDPTSPTQRIGAEP 66
>UniRef50_Q9RSQ5 Cluster: DNA ligase; n=2; Deinococcus|Rep: DNA
ligase - Deinococcus radiodurans
Length = 700
Score = 68.1 bits (159), Expect = 2e-10
Identities = 32/57 (56%), Positives = 36/57 (63%)
Frame = -2
Query: 425 NDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAA 255
++V H Y+ DAP IPD EYDRL RELRELE HPE SP Q VG AP +A
Sbjct: 23 DEVALHNRAYYEQDAPTIPDDEYDRLARELRELEAAHPEFADDHSPVQTVGGAPSSA 79
Score = 64.5 bits (150), Expect = 3e-09
Identities = 34/89 (38%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Frame = -1
Query: 264 AGGFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLK---NNEKVTWCCELKLDGLAVSI 94
+ F + H M SLDNVFD++ + +++ L + + T+ ELK+DGL+V++
Sbjct: 77 SSAFEPVTHPTQMTSLDNVFDDDELRDWQEKLARSLGLPLDTDDFTFTGELKIDGLSVNL 136
Query: 93 LYENGVLVSAATRGDGTTGEDITSNVRTI 7
Y +G L AATRG+G GE +T+ V TI
Sbjct: 137 YYLDGELQWAATRGNGRVGEIVTAQVLTI 165
>UniRef50_O84148 Cluster: DNA ligase; n=7; Chlamydiaceae|Rep: DNA
ligase - Chlamydia trachomatis
Length = 663
Score = 68.1 bits (159), Expect = 2e-10
Identities = 36/88 (40%), Positives = 52/88 (59%)
Frame = -1
Query: 264 AGGFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYE 85
+G F + H PMLS+ NV+ + F R + L + + ELK+DG+AV+I YE
Sbjct: 68 SGQFPVVPHSSPMLSIANVYSLQELEEFFSRTEKLLGYSPG--YSLELKIDGIAVAIRYE 125
Query: 84 NGVLVSAATRGDGTTGEDITSNVRTIRA 1
+ A +RG+G GEDIT+NV TIR+
Sbjct: 126 KRLFAQALSRGNGVKGEDITANVSTIRS 153
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/49 (44%), Positives = 30/49 (61%)
Frame = -2
Query: 410 HEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAP 264
H+ Y+V++ P I D YD MREL+E+E +HPE SPT +G P
Sbjct: 19 HDRRYYVLNQPTISDYSYDVKMRELQEIEVQHPEWKVSWSPTMYLGDRP 67
>UniRef50_O51502 Cluster: DNA ligase; n=3; Borrelia burgdorferi
group|Rep: DNA ligase - Borrelia burgdorferi (Lyme
disease spirochete)
Length = 660
Score = 67.7 bits (158), Expect = 3e-10
Identities = 35/84 (41%), Positives = 49/84 (58%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 76
F ++ H P+LSLD V+D L K D++ N E K+DG ++ + Y++GV
Sbjct: 71 FKEVEHSAPILSLDKVYD----LDLLKSWIDKIDFNNSFNISVEPKIDGCSIVLYYKDGV 126
Query: 75 LVSAATRGDGTTGEDITSNVRTIR 4
L A TRG+G G D+T NVRTIR
Sbjct: 127 LEKALTRGNGKFGNDVTINVRTIR 150
Score = 43.6 bits (98), Expect = 0.005
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = -2
Query: 419 VRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 270
+R + Y+V P + D YD+ + L+ELE+K+PE T DSPT + G+
Sbjct: 16 IRKWDKEYYVDSLPSVEDFVYDKHILRLQELESKYPEYKTLDSPTLKFGS 65
>UniRef50_Q4AA72 Cluster: DNA ligase; n=5; Mycoplasma
hyopneumoniae|Rep: DNA ligase - Mycoplasma hyopneumoniae
(strain J / ATCC 25934 / NCTC 10110)
Length = 692
Score = 67.3 bits (157), Expect = 4e-10
Identities = 33/83 (39%), Positives = 49/83 (59%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 76
F ++ H PMLSL+ + E + K+ + LK VT+ E K+DG+A+S+ Y+NG
Sbjct: 77 FEKVAHSSPMLSLNKAYSNEELEKWAKKASEILKT---VTFFVEPKIDGIALSLFYQNGN 133
Query: 75 LVSAATRGDGTTGEDITSNVRTI 7
L+ A TRGDG GE++ N I
Sbjct: 134 LIKALTRGDGVFGENVLVNALKI 156
>UniRef50_A1ATJ6 Cluster: DNA ligase, NAD-dependent; n=1; Pelobacter
propionicus DSM 2379|Rep: DNA ligase, NAD-dependent -
Pelobacter propionicus (strain DSM 2379)
Length = 704
Score = 67.3 bits (157), Expect = 4e-10
Identities = 38/85 (44%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = -1
Query: 258 GFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNE-KVTWCCELKLDGLAVSILYEN 82
GF +++H VPMLS++N L+ + + LK++ + E K+DGL+ SI YE
Sbjct: 81 GFKKVQHSVPMLSIENK-PVTKMLSEVRSIIKELKDDAISIDIVAEPKIDGLSCSIRYEK 139
Query: 81 GVLVSAATRGDGTTGEDITSNVRTI 7
LV AATRGDG GEDIT NV +I
Sbjct: 140 HQLVRAATRGDGLEGEDITVNVHSI 164
Score = 49.6 bits (113), Expect = 8e-05
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Frame = -2
Query: 419 VRHHEYLYHVMDAP--EIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAA 267
+ H+ LY+ P EI D EYD L +EL+ELE++ PE + DSPTQ VG +
Sbjct: 25 IAHNNRLYYENIPPRREIHDYEYDELFKELQELESRFPEFQSADSPTQIVGGS 77
>UniRef50_Q112N5 Cluster: DNA ligase, NAD-dependent; n=4;
Bacteria|Rep: DNA ligase, NAD-dependent - Trichodesmium
erythraeum (strain IMS101)
Length = 774
Score = 66.9 bits (156), Expect = 5e-10
Identities = 29/47 (61%), Positives = 37/47 (78%)
Frame = -1
Query: 141 VTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRA 1
V + CELK+DG A+++ YENG+LV ATRGDG GEDIT NV+TI +
Sbjct: 156 VDYICELKIDGSALALTYENGLLVRGATRGDGIMGEDITQNVKTINS 202
Score = 65.3 bits (152), Expect = 1e-09
Identities = 28/47 (59%), Positives = 37/47 (78%)
Frame = -2
Query: 404 YLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAP 264
Y Y+V+D P + DA YD L+REL+ELE+++P+LI DSPTQRVG P
Sbjct: 24 YSYYVLDQPIMEDAVYDHLLRELQELESQYPQLIVSDSPTQRVGEKP 70
>UniRef50_A5IY71 Cluster: DNA ligase; n=1; Mycoplasma
agalactiae|Rep: DNA ligase - Mycoplasma agalactiae
Length = 654
Score = 66.9 bits (156), Expect = 5e-10
Identities = 31/89 (34%), Positives = 56/89 (62%)
Frame = -1
Query: 267 AAGGFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILY 88
A+ F++ ++ PMLSL ++ + +F + ++ E + + E K+DGL++++ Y
Sbjct: 68 ASEKFTKFVYQKPMLSLAKAYNYDDINSFINNIS-KIVPTENINFNIEPKIDGLSIALRY 126
Query: 87 ENGVLVSAATRGDGTTGEDITSNVRTIRA 1
+ G LV AATRGDG+ GED+T N+ I++
Sbjct: 127 KQGKLVKAATRGDGSEGEDVTENIYQIKS 155
Score = 51.6 bits (118), Expect = 2e-05
Identities = 20/50 (40%), Positives = 33/50 (66%)
Frame = -2
Query: 419 VRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 270
+ Y Y+ ++ P + D EYD+ + EL +LE +HP+LI +SPT R+G+
Sbjct: 17 INQWNYEYYQLNKPSVSDLEYDKALLELEKLEKEHPDLILSNSPTFRIGS 66
>UniRef50_Q8EYU4 Cluster: DNA ligase; n=4; Leptospira|Rep: DNA
ligase - Leptospira interrogans
Length = 681
Score = 65.3 bits (152), Expect = 1e-09
Identities = 30/84 (35%), Positives = 51/84 (60%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 76
F + +H++P+LSL N +++ L + K + + + E K+DG ++ + YENG+
Sbjct: 83 FEKFQHKLPVLSLINTYNDNELLEWVN------KTDPEGLYSVEWKIDGASIVLYYENGI 136
Query: 75 LVSAATRGDGTTGEDITSNVRTIR 4
L + TRG G G+D+T N+RTIR
Sbjct: 137 LKNGVTRGSGGIGDDVTDNIRTIR 160
Score = 54.8 bits (126), Expect = 2e-06
Identities = 22/55 (40%), Positives = 39/55 (70%)
Frame = -2
Query: 434 RTANDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 270
+ ++++RHH+YLY+V + P+I D ++D+L R L++LE + P+ SPT VG+
Sbjct: 23 KLSDEIRHHQYLYYVKNDPKISDFDFDQLFRRLQDLEEEFPQFKDLASPTLVVGS 77
>UniRef50_Q98QH2 Cluster: DNA LIGASE; n=2; Mycoplasma pulmonis|Rep:
DNA LIGASE - Mycoplasma pulmonis
Length = 679
Score = 63.7 bits (148), Expect = 4e-09
Identities = 29/80 (36%), Positives = 48/80 (60%)
Frame = -1
Query: 243 RHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSA 64
+H+ MLSL+ + E + R+ + NN + + + K+DG+++S+ YENG+L A
Sbjct: 87 KHQKLMLSLNKAYSFEDLERYTNRINTFVGNNHQ--YILQEKIDGVSISLYYENGILTKA 144
Query: 63 ATRGDGTTGEDITSNVRTIR 4
TRGDG GE++T N I+
Sbjct: 145 LTRGDGIYGENVTHNALNIK 164
>UniRef50_A0LDY1 Cluster: DNA ligase; n=2; Proteobacteria|Rep: DNA
ligase - Magnetococcus sp. (strain MC-1)
Length = 768
Score = 62.9 bits (146), Expect = 8e-09
Identities = 28/53 (52%), Positives = 35/53 (66%)
Frame = -2
Query: 419 VRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPL 261
+ H+ + YH +D + DAEYDRL REL+ LE P LI+ DSPT RVG A L
Sbjct: 13 LNHYAHSYHTLDTSLVSDAEYDRLFRELQSLEAADPTLISADSPTHRVGGAIL 65
Score = 61.3 bits (142), Expect = 2e-08
Identities = 28/48 (58%), Positives = 36/48 (75%)
Frame = -1
Query: 147 EKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIR 4
++V + E KLDGLA S+ Y GVLV AATRGDG GED+T++ RTI+
Sbjct: 183 QRVEYVAEPKLDGLAFSLTYAEGVLVRAATRGDGQEGEDVTAHARTIQ 230
Score = 42.3 bits (95), Expect = 0.012
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = -1
Query: 258 GFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRL 157
GF ++RH V MLSLDN F + + F++RVQ+ L
Sbjct: 67 GFEKVRHRVAMLSLDNAFSAQDLVEFHRRVQEGL 100
>UniRef50_A5N2X7 Cluster: LigA1; n=2; Clostridium kluyveri DSM
555|Rep: LigA1 - Clostridium kluyveri DSM 555
Length = 663
Score = 61.7 bits (143), Expect = 2e-08
Identities = 28/83 (33%), Positives = 51/83 (61%)
Frame = -1
Query: 249 QIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLV 70
+++H++P++SL +VF +E +F +++ + + V E K+DGL V + Y NG L
Sbjct: 71 KVKHDIPVVSLQDVFSKEEVYSFVEKITSEVTYPKFVV---EKKIDGLTVVLRYYNGELK 127
Query: 69 SAATRGDGTTGEDITSNVRTIRA 1
A TRGDG+ GE + N+ +++
Sbjct: 128 EAITRGDGSIGESVFENILQVKS 150
Score = 55.6 bits (128), Expect = 1e-06
Identities = 26/55 (47%), Positives = 31/55 (56%)
Frame = -2
Query: 437 DRTANDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 273
D + +H Y+ D PEI D EYD+L ELR LE HPE SPTQ+VG
Sbjct: 8 DELRKIIEYHNDKYYNQDDPEITDYEYDKLYVELRNLENSHPEYKIQSSPTQKVG 62
>UniRef50_Q1ZXG5 Cluster: BRCT domain-containing protein; n=2;
Eukaryota|Rep: BRCT domain-containing protein -
Dictyostelium discoideum AX4
Length = 843
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 9/86 (10%)
Frame = -1
Query: 249 QIRHEVPMLSLDNVFDEESFLAFNKRVQDRL---------KNNEKVTWCCELKLDGLAVS 97
+ RH+ MLSL N + ++ +AF +++ L + +++ + ELK DG+ +S
Sbjct: 132 KFRHKSRMLSLQNTYSKDDIIAFKNKIEKFLLKKQTSQQQQPQQQIEYSLELKYDGIGIS 191
Query: 96 ILYENGVLVSAATRGDGTTGEDITSN 19
++YEN L TRG+G GEDIT+N
Sbjct: 192 LVYENNKLKRVLTRGNGEIGEDITTN 217
>UniRef50_O25336 Cluster: DNA ligase; n=7; Campylobacterales|Rep:
DNA ligase - Helicobacter pylori (Campylobacter pylori)
Length = 656
Score = 61.7 bits (143), Expect = 2e-08
Identities = 31/83 (37%), Positives = 54/83 (65%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 76
F++ H + M SLD+VF++ A+ +R+ LK ++ C KLDG+++++LY++G
Sbjct: 70 FNKNPHLMRMWSLDDVFNQSELQAWLQRI---LKAYPSASFVCSPKLDGVSLNLLYQHGK 126
Query: 75 LVSAATRGDGTTGEDITSNVRTI 7
LV A TRG+G GE +++N + I
Sbjct: 127 LVKATTRGNGLEGELVSANAKHI 149
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/52 (46%), Positives = 33/52 (63%)
Frame = -2
Query: 425 NDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 270
N + HH Y+ +D P + DA YD L +EL+ E K+P I +SPTQ+VGA
Sbjct: 16 NTLSHH---YYNLDEPIVSDAIYDELYQELKAYEEKNPNGIQANSPTQKVGA 64
>UniRef50_Q5YVN7 Cluster: DNA ligase; n=1; Nocardia farcinica|Rep:
DNA ligase - Nocardia farcinica
Length = 663
Score = 60.9 bits (141), Expect = 3e-08
Identities = 35/80 (43%), Positives = 48/80 (60%)
Frame = -1
Query: 246 IRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVS 67
+RH PMLSL+ E AF +R + V KLDGL+++++YE+G LV
Sbjct: 70 VRHSRPMLSLEKATTPEQVAAFFERFP-----GQPVV--VMPKLDGLSLALVYEDGRLVR 122
Query: 66 AATRGDGTTGEDITSNVRTI 7
A TRGDGTTG+D+T VR +
Sbjct: 123 AVTRGDGTTGDDVTMLVRAL 142
Score = 41.5 bits (93), Expect = 0.021
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = -2
Query: 383 APEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA-APLAASARYA 240
AP + DAEYD + ELR L HPEL +P +VGA A L A R++
Sbjct: 25 APLVADAEYDAVEDELRALIAAHPELAPDPNPLDQVGAPAVLHAPVRHS 73
>UniRef50_Q2Q0G8 Cluster: NAD-dependent DNA ligase; n=1; uncultured
organism HF70_19B12|Rep: NAD-dependent DNA ligase -
uncultured organism HF70_19B12
Length = 707
Score = 58.4 bits (135), Expect = 2e-07
Identities = 34/86 (39%), Positives = 45/86 (52%)
Frame = -1
Query: 264 AGGFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYE 85
A G ++ H PMLSLD + F + + + + KLDG A+S+ Y
Sbjct: 63 APGSVKVEHIYPMLSLDKANTPQEIAHFVN-----ITSAATQRFVVQPKLDGSAISLEYR 117
Query: 84 NGVLVSAATRGDGTTGEDITSNVRTI 7
G+LV A TRG GT GED+T NVR I
Sbjct: 118 RGMLVRAVTRGSGTRGEDVTRNVRRI 143
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/64 (35%), Positives = 39/64 (60%)
Frame = -2
Query: 437 DRTANDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLA 258
DR A++++ H LY+ PEI DA++D L++ LRE++ +P+L ++VGA P
Sbjct: 12 DRLASEIQRHSELYYNYAEPEITDAQFDLLIQRLREIDPSNPQL-------EKVGADPAP 64
Query: 257 ASAR 246
S +
Sbjct: 65 GSVK 68
>UniRef50_O83642 Cluster: DNA ligase; n=1; Treponema pallidum|Rep:
DNA ligase - Treponema pallidum
Length = 823
Score = 58.4 bits (135), Expect = 2e-07
Identities = 33/80 (41%), Positives = 46/80 (57%)
Frame = -1
Query: 243 RHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSA 64
RH VPM S DEESF A+ K+ N + + KLDG+++ + YE G A
Sbjct: 66 RHIVPMGSQHKAADEESFSAWAKK-------NALQAFLVQHKLDGVSLELQYERGHFCCA 118
Query: 63 ATRGDGTTGEDITSNVRTIR 4
TRG+G G+D+T+NVR +R
Sbjct: 119 LTRGNGIVGDDVTANVRGMR 138
>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 1043
Score = 57.6 bits (133), Expect = 3e-07
Identities = 22/54 (40%), Positives = 33/54 (61%)
Frame = +2
Query: 506 TNSPYSESYYNSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPS 667
T + ++E LA +L R DW+NP +T +NRL +H P WR+++ AR PS
Sbjct: 6 TTTAFNELQTRPLATILARNDWQNPAITSVNRLPSHTPLHGWRDADRARRGEPS 59
>UniRef50_A6BE81 Cluster: Putative uncharacterized protein; n=3;
Bacteria|Rep: Putative uncharacterized protein - Dorea
longicatena DSM 13814
Length = 692
Score = 54.8 bits (126), Expect = 2e-06
Identities = 31/79 (39%), Positives = 45/79 (56%)
Frame = -1
Query: 252 SQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVL 73
+++ H P+LSL+ L F K ++V + LKLDGL ++YE+G L
Sbjct: 94 AKVTHPTPLLSLEKTKLISELLDFMK--------GQEVLFM--LKLDGLTTKLIYEDGKL 143
Query: 72 VSAATRGDGTTGEDITSNV 16
+ A+TRGDG GEDIT N+
Sbjct: 144 IQASTRGDGEVGEDITHNI 162
Score = 46.8 bits (106), Expect = 5e-04
Identities = 23/58 (39%), Positives = 36/58 (62%)
Frame = -2
Query: 419 VRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAASAR 246
+ + + Y+ DAP + DAEYDRL +L++LE + I +SPTQ VG P++ A+
Sbjct: 39 LNEYRHAYYNQDAPLVSDAEYDRLFDKLKKLE-EQTGFILSNSPTQTVGYYPVSELAK 95
>UniRef50_Q2Z0V9 Cluster: Putative NAD-dependent DNA ligase; n=1;
Pseudomonas phage EL|Rep: Putative NAD-dependent DNA
ligase - Pseudomonas phage EL
Length = 656
Score = 54.8 bits (126), Expect = 2e-06
Identities = 32/77 (41%), Positives = 42/77 (54%)
Frame = -1
Query: 246 IRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVS 67
+R E PMLSL E F LK + + E KLDGLA+ ++YE G LVS
Sbjct: 78 VRFEEPMLSLKKALSVEEADTF------LLKFPDGTNFFYEEKLDGLALELVYEQGQLVS 131
Query: 66 AATRGDGTTGEDITSNV 16
+TRG G GED+T ++
Sbjct: 132 MSTRGSGLVGEDVTHSI 148
Score = 35.9 bits (79), Expect = 1.0
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = -2
Query: 413 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPEL 306
+H +LY V + EI D YD L +EL EL ++PE+
Sbjct: 19 YHAHLYFVENRNEISDEAYDVLEQELNELYDRYPEI 54
>UniRef50_A6NWP3 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 656
Score = 54.4 bits (125), Expect = 3e-06
Identities = 35/84 (41%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Frame = -1
Query: 246 IRHEVPMLSLD---NVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGV 76
+RH PMLS D +V D +L ++ V ++W KLDGL + + YENG
Sbjct: 71 VRHSRPMLSADKCKSVADIHKYLGGHEAV---------LSW----KLDGLTLVLRYENGK 117
Query: 75 LVSAATRGDGTTGEDITSNVRTIR 4
LV A TRGDG GED+T VR ++
Sbjct: 118 LVQAITRGDGLQGEDVTHTVRIMK 141
Score = 37.9 bits (84), Expect = 0.25
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = -2
Query: 419 VRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPL 261
++ + Y+ DAP + D +YDRL EL LE + I SPTQRV L
Sbjct: 14 IKEADEAYYKYDAPIMADLDYDRLYDELAALE-RETGTILSSSPTQRVSGEVL 65
>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
pneumoniae
Length = 1034
Score = 54.4 bits (125), Expect = 3e-06
Identities = 26/56 (46%), Positives = 31/56 (55%)
Frame = +2
Query: 512 SPYSESYYNSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 679
S S+ VL R DW N +T LNRL AHP FASWR+ AR + PS + R
Sbjct: 4 SDTGRSHTPDFHAVLAREDWHNQTITHLNRLPAHPVFASWRDELAARDNLPSSRRR 59
>UniRef50_A7AXK5 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus gnavus ATCC 29149|Rep: Putative
uncharacterized protein - Ruminococcus gnavus ATCC 29149
Length = 663
Score = 53.2 bits (122), Expect = 6e-06
Identities = 33/79 (41%), Positives = 40/79 (50%)
Frame = -1
Query: 249 QIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLV 70
+++H PMLSLD K V D +K LK+DGL + YENG LV
Sbjct: 83 KVKHSHPMLSLDKT----------KSVDDLVKFAGDKDCILSLKMDGLTCLLTYENGELV 132
Query: 69 SAATRGDGTTGEDITSNVR 13
A TRGDG GE IT N +
Sbjct: 133 QAETRGDGEIGELITHNAK 151
Score = 36.7 bits (81), Expect = 0.58
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = -2
Query: 377 EIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 273
++ DAEYDRL EL ELE + + T +SPTQ VG
Sbjct: 41 DVSDAEYDRLFDELSELENETGVVYT-NSPTQSVG 74
>UniRef50_Q73MH0 Cluster: DNA ligase, NAD-dependent; n=1; Treponema
denticola|Rep: DNA ligase, NAD-dependent - Treponema
denticola
Length = 645
Score = 52.8 bits (121), Expect = 8e-06
Identities = 29/81 (35%), Positives = 44/81 (54%)
Frame = -1
Query: 258 GFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENG 79
GF++ H +PM S + D SF A+ ++ + + + K+DG ++ + YE G
Sbjct: 60 GFAKSEHIIPMGSQEKAADPPSFEAWALKMPFK-------EYIVQYKMDGASLELQYEEG 112
Query: 78 VLVSAATRGDGTTGEDITSNV 16
V A TRGDG G+DIT NV
Sbjct: 113 HFVRAVTRGDGKIGDDITENV 133
>UniRef50_Q332J4 Cluster: Putative NAD-dependent DNA ligase; n=1;
Clostridium phage c-st|Rep: Putative NAD-dependent DNA
ligase - Clostridium botulinum C bacteriophage
Length = 649
Score = 52.8 bits (121), Expect = 8e-06
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = -1
Query: 120 KLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIR 4
K DGL ++YENG L+ +TRG+GT GEDIT NV+T +
Sbjct: 104 KGDGLTCELIYENGELIQGSTRGNGTIGEDITHNVKTFK 142
>UniRef50_A5Z9H7 Cluster: Putative uncharacterized protein; n=2;
Clostridiales|Rep: Putative uncharacterized protein -
Eubacterium ventriosum ATCC 27560
Length = 655
Score = 52.4 bits (120), Expect = 1e-05
Identities = 33/80 (41%), Positives = 44/80 (55%)
Frame = -1
Query: 243 RHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSA 64
+H PMLSLD + + F DR ++W K+DGL V + YENG LV A
Sbjct: 72 QHNSPMLSLDKTKEVGALADF---AGDR---KCLLSW----KMDGLTVVLTYENGELVKA 121
Query: 63 ATRGDGTTGEDITSNVRTIR 4
TRG+G GE IT+N +T +
Sbjct: 122 VTRGNGLVGEVITNNAKTFK 141
>UniRef50_Q6QGH1 Cluster: NAD-dependent DNA ligase, subunit A; n=2;
Enterobacteria phage T5|Rep: NAD-dependent DNA ligase,
subunit A - Bacteriophage T5
Length = 323
Score = 52.0 bits (119), Expect = 1e-05
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = -1
Query: 120 KLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTI 7
KLDG A+S+LY NG V A TRG+G G D+TSNVR +
Sbjct: 78 KLDGCAISLLYINGEFVQALTRGNGILGNDVTSNVRLL 115
>UniRef50_Q97FQ5 Cluster: NAD-dependent DNA ligase; n=14;
Clostridiaceae|Rep: NAD-dependent DNA ligase -
Clostridium acetobutylicum
Length = 669
Score = 51.6 bits (118), Expect = 2e-05
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Frame = -1
Query: 255 FSQIRHEVPMLSLDNVFDEESFLAFNKR----VQDRLKNNE----KVTWCCELKLDGLAV 100
F + H+ + SLD E + ++ R V + N+E ++ + K DGL +
Sbjct: 72 FQKYTHKSRLWSLDKAQSFEEIIDWHNRNKKAVAEYNSNHEDKLPELKYVLTKKFDGLTI 131
Query: 99 SILY-ENGVLVSAATRGDGTTGEDITSNVRTIRA 1
+ Y E+GV++ AATRG G GEDITS +TI++
Sbjct: 132 NCTYDESGVMIKAATRGTGVIGEDITSQAKTIKS 165
Score = 46.0 bits (104), Expect = 0.001
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = -2
Query: 422 DVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAASARY 243
++ + Y Y+V+D P + D EYD+ EL ELE K + P SPT RVG L +Y
Sbjct: 17 ELNKYSYSYYVLDNPIVADKEYDKRYDELVELEEK-TGITYPYSPTNRVGDVILKQFQKY 75
Query: 242 AMK 234
K
Sbjct: 76 THK 78
>UniRef50_Q1FIG6 Cluster: DNA ligase, NAD-dependent; n=6;
Clostridiales|Rep: DNA ligase, NAD-dependent -
Clostridium phytofermentans ISDg
Length = 653
Score = 51.6 bits (118), Expect = 2e-05
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = -1
Query: 243 RHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKV-TWCCELKLDGLAVSILYENGVLVS 67
RHE MLSLD + + + D L N E + +W K+DGL + + Y NG LV
Sbjct: 73 RHESAMLSLDKTKEVPALI-------DWLGNKEGILSW----KMDGLTIVLTYRNGELVK 121
Query: 66 AATRGDGTTGEDITSNVRTIR 4
A TRG+G GE +T+N + +
Sbjct: 122 AVTRGNGEVGEVVTNNAKVFK 142
>UniRef50_Q1VH26 Cluster: NAD-dependent DNA ligase; n=1;
Psychroflexus torquis ATCC 700755|Rep: NAD-dependent DNA
ligase - Psychroflexus torquis ATCC 700755
Length = 107
Score = 50.8 bits (116), Expect = 3e-05
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = -2
Query: 428 ANDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPEL 306
A + HH +LY+ + PEI DA +DRL EL+EL+ HP+L
Sbjct: 19 AEQIAHHSHLYYNLAQPEISDAAFDRLWAELKELDANHPQL 59
>UniRef50_A4VRF3 Cluster: DNA ligase, NAD-dependent, putative; n=12;
Pseudomonadaceae|Rep: DNA ligase, NAD-dependent,
putative - Pseudomonas stutzeri (strain A1501)
Length = 597
Score = 50.8 bits (116), Expect = 3e-05
Identities = 32/88 (36%), Positives = 48/88 (54%)
Frame = -1
Query: 264 AGGFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYE 85
AGG +RH V L + DE++ + R +D W + K+DG+AV+++Y
Sbjct: 130 AGG--PLRHPVRQTGLVKLADEQAVATWIARRRD--------LWI-QPKIDGVAVTLVYR 178
Query: 84 NGVLVSAATRGDGTTGEDITSNVRTIRA 1
+G L A +RGDG TG D T+N R + A
Sbjct: 179 HGALQQAISRGDGLTGHDWTANARRLAA 206
>UniRef50_UPI00015C63D1 Cluster: hypothetical protein CKO_05104;
n=1; Citrobacter koseri ATCC BAA-895|Rep: hypothetical
protein CKO_05104 - Citrobacter koseri ATCC BAA-895
Length = 576
Score = 48.0 bits (109), Expect = 2e-04
Identities = 27/63 (42%), Positives = 40/63 (63%)
Frame = -1
Query: 189 LAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRT 10
LA + VQ ++ + W + K+DG+AV+++Y +G LVSA +RG+G GED T VR
Sbjct: 119 LADKQAVQQWMRKRSDL-WV-QPKVDGVAVTLVYRDGRLVSAISRGNGLKGEDWTQKVRL 176
Query: 9 IRA 1
I A
Sbjct: 177 IPA 179
>UniRef50_A3JLD8 Cluster: Putative uncharacterized protein; n=1;
Marinobacter sp. ELB17|Rep: Putative uncharacterized
protein - Marinobacter sp. ELB17
Length = 490
Score = 47.6 bits (108), Expect = 3e-04
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Frame = -1
Query: 258 GFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKN---NEKVTWCCELKLDGLAVSILY 88
G ++RH++PMLS + V + A+ +RV+ +N V KLDG+A +
Sbjct: 72 GAGKVRHQIPMLSTEKVKTDSELSAWVRRVESAAQNIGIRTPVLLSVTAKLDGMAGRL-- 129
Query: 87 ENGVLVSAATRGDGTTGEDIT 25
++GVL A+RGDG TG +IT
Sbjct: 130 KDGVL---ASRGDGLTGNNIT 147
>UniRef50_A6GI82 Cluster: DNA ligase, NAD-dependent; n=1;
Plesiocystis pacifica SIR-1|Rep: DNA ligase,
NAD-dependent - Plesiocystis pacifica SIR-1
Length = 706
Score = 47.2 bits (107), Expect = 4e-04
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = -1
Query: 246 IRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYE-NGVLV 70
+RH MLSLD + E ++ ++ + + K+DG+A S+ Y+ G L
Sbjct: 107 VRHTRAMLSLDKCYGPEDLYSWTEKFEGEV--------LVMPKMDGVACSLRYDAEGKLF 158
Query: 69 SAATRGDGTTGEDITSNV 16
AATRG+G+ GEDIT NV
Sbjct: 159 LAATRGNGSEGEDITVNV 176
Score = 42.7 bits (96), Expect = 0.009
Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Frame = -2
Query: 500 APACRGFLALMVRYGINRTTTDRTANDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELET 321
AP G + G+ D A +R + Y + AP IPD YDRL+ LR L+
Sbjct: 12 APDVSGLDTAAIEAGLPSFDADTLAALIRRTNHEYWNLHAPTIPDPVYDRLVEGLRRLDP 71
Query: 320 KHPEL-----ITPDSP 288
HP L TP+ P
Sbjct: 72 AHPVLDELGEATPEGP 87
>UniRef50_P81650 Cluster: Beta-galactosidase; n=26;
Gammaproteobacteria|Rep: Beta-galactosidase -
Pseudoalteromonas haloplanktis (Alteromonas
haloplanktis)
Length = 1039
Score = 46.0 bits (104), Expect = 0.001
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +2
Query: 539 SLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQ 673
SL ++ RRDWENP Q+N++ AH P ++ E+AR + SQ+
Sbjct: 3 SLQHIINRRDWENPITVQVNQVKAHSPLNGFKTIEDARENTQSQK 47
>UniRef50_A6FGB3 Cluster: DNA ligase, NAD-dependent, putative; n=1;
Moritella sp. PE36|Rep: DNA ligase, NAD-dependent,
putative - Moritella sp. PE36
Length = 413
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/71 (35%), Positives = 41/71 (57%)
Frame = -1
Query: 240 HEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSAA 61
H MLSL++V + + F + QD+ + K DG+A+ ++YE G+LV A+
Sbjct: 119 HRQQMLSLNSVRERTAVDKFYQLHQDQ-------QLLIQPKFDGMAIELVYEKGMLVGAS 171
Query: 60 TRGDGTTGEDI 28
+RGDG G+D+
Sbjct: 172 SRGDGKQGKDL 182
>UniRef50_A0ITI0 Cluster: NAD-dependent DNA ligase precursor; n=3;
Enterobacteriaceae|Rep: NAD-dependent DNA ligase
precursor - Serratia proteamaculans 568
Length = 469
Score = 42.3 bits (95), Expect = 0.012
Identities = 18/40 (45%), Positives = 29/40 (72%)
Frame = -1
Query: 120 KLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRA 1
K+DG+A++++Y +G LV+A +RG+G GE+ VR I A
Sbjct: 130 KVDGVAITLIYRDGELVAAISRGNGLKGENWLEKVRAIPA 169
>UniRef50_Q7N9N4 Cluster: Similar to putative DNA ligase-like
protein YicF of Escherichia coli; n=1; Photorhabdus
luminescens subsp. laumondii|Rep: Similar to putative
DNA ligase-like protein YicF of Escherichia coli -
Photorhabdus luminescens subsp. laumondii
Length = 580
Score = 41.1 bits (92), Expect = 0.027
Identities = 18/38 (47%), Positives = 28/38 (73%)
Frame = -1
Query: 120 KLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTI 7
K+DG+AV+++Y+NG LVS +RG+G G + T+ R I
Sbjct: 135 KIDGVAVTLVYQNGKLVSLISRGNGAEGVNWTAKSRYI 172
>UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia
spumigena CCY 9414|Rep: Beta-D-galactosidase - Nodularia
spumigena CCY 9414
Length = 72
Score = 41.1 bits (92), Expect = 0.027
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +2
Query: 629 WRNSEEARTDRPSQQLRT 682
WRNSEEARTDRPSQQLR+
Sbjct: 47 WRNSEEARTDRPSQQLRS 64
>UniRef50_P25772 Cluster: Uncharacterized DNA ligase-like protein
yicF; n=33; cellular organisms|Rep: Uncharacterized DNA
ligase-like protein yicF - Escherichia coli (strain K12)
Length = 560
Score = 41.1 bits (92), Expect = 0.027
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = -1
Query: 120 KLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRA 1
K+DG+AV+++Y +G L A +RG+G GED T V I A
Sbjct: 124 KVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISA 163
>UniRef50_A0TI12 Cluster: Putative uncharacterized protein; n=1;
Burkholderia ambifaria MC40-6|Rep: Putative
uncharacterized protein - Burkholderia ambifaria MC40-6
Length = 1016
Score = 40.7 bits (91), Expect = 0.036
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +3
Query: 270 SAYTLSRRIRRNQFWMFGFQLAQFAHQPVVFSVGNFRRIHHMIKI 404
+A L RI R++ M GF+L Q A Q +VF +G R + H+I +
Sbjct: 387 AADALRWRIGRHEVGMIGFELLQLAEQSIVFGIGQIRLVEHVIGV 431
>UniRef50_Q1QXD7 Cluster: DNA ligase (NAD+) precursor; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DNA ligase
(NAD+) precursor - Chromohalobacter salexigens (strain
DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 629
Score = 39.9 bits (89), Expect = 0.063
Identities = 15/30 (50%), Positives = 25/30 (83%)
Frame = -1
Query: 120 KLDGLAVSILYENGVLVSAATRGDGTTGED 31
K+DG+AV+++Y +G L +A +RGDG +G+D
Sbjct: 151 KVDGVAVTLVYRHGRLAAAISRGDGVSGQD 180
>UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8;
Bacteria|Rep: 50S ribosomal protein L5 - Moritella sp.
PE36
Length = 45
Score = 39.9 bits (89), Expect = 0.063
Identities = 22/29 (75%), Positives = 23/29 (79%)
Frame = -3
Query: 700 FAIRHSGAQLLGRAIGAGLFAITPAGERG 614
FAI+ AQLLGRAIGAGLFAITP E G
Sbjct: 12 FAIQ--AAQLLGRAIGAGLFAITPEFELG 38
>UniRef50_Q15XN9 Cluster: Glycoside hydrolase family 2, TIM barrel
precursor; n=1; Pseudoalteromonas atlantica T6c|Rep:
Glycoside hydrolase family 2, TIM barrel precursor -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 1079
Score = 37.1 bits (82), Expect = 0.44
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 527 SYYNSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEART-DRPSQQLRT 682
S+ S V + DWENP V Q+NRL A S+ E+A T DR +++
Sbjct: 20 SFTGSAKTVQVKNDWENPDVIQINRLPARATSYSFDTPEQALTRDRNQSTIQS 72
>UniRef50_A7FCR5 Cluster: DNA ligase, NAD-dependent; n=14;
Yersinia|Rep: DNA ligase, NAD-dependent - Yersinia
pseudotuberculosis IP 31758
Length = 567
Score = 36.3 bits (80), Expect = 0.77
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -1
Query: 120 KLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRA 1
K+DG+AV+++Y G LV +RG+G G++ T I A
Sbjct: 132 KVDGVAVTLVYHGGKLVQLLSRGNGVKGQNWTEKAPFISA 171
>UniRef50_Q00W40 Cluster: COG0272: NAD-dependent DNA ligase; n=2;
Ostreococcus|Rep: COG0272: NAD-dependent DNA ligase -
Ostreococcus tauri
Length = 808
Score = 36.3 bits (80), Expect = 0.77
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = -2
Query: 449 RTTTDRTANDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGA 270
R +R ++ HH+ Y+ I D+EYD L +E HP + RVGA
Sbjct: 71 RRELERLNEELAHHDRSYYNDGEGVISDSEYDSLRARYLAIERLHPSAARALGASARVGA 130
Query: 269 AP 264
P
Sbjct: 131 TP 132
>UniRef50_Q49078 Cluster: DNA ligase; n=5; Mollicutes|Rep: DNA
ligase - Mycoplasma capricolum
Length = 42
Score = 35.9 bits (79), Expect = 1.0
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = -1
Query: 63 ATRGDGTTGEDITSNVRTIRA 1
ATRG+G GED+T+NVRTI++
Sbjct: 1 ATRGNGVIGEDVTTNVRTIKS 21
>UniRef50_A6DPT5 Cluster: NAD-dependent DNA ligase; n=1;
Lentisphaera araneosa HTCC2155|Rep: NAD-dependent DNA
ligase - Lentisphaera araneosa HTCC2155
Length = 647
Score = 35.9 bits (79), Expect = 1.0
Identities = 21/75 (28%), Positives = 37/75 (49%)
Frame = -1
Query: 252 SQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVL 73
+++ VPM SL+ + + ++K L C K DGL++ + + +G+
Sbjct: 53 NKVELAVPMGSLNKIKTQAEVFDWSKSKSIPLDTEI----CVTPKYDGLSLLVYFVDGIY 108
Query: 72 VSAATRGDGTTGEDI 28
A TRGDG G+D+
Sbjct: 109 KGAYTRGDGMFGQDV 123
>UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus
lactis|Rep: Beta-galactosidase - Lactococcus lactis
subsp. lactis (Streptococcus lactis)
Length = 998
Score = 35.9 bits (79), Expect = 1.0
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +2
Query: 551 VLQRRDWENPGVTQLNRLAAHPP 619
VL+R+DWENP V+ NRL H P
Sbjct: 9 VLERKDWENPVVSNWNRLPMHTP 31
>UniRef50_A0UVE2 Cluster: Glycoside hydrolase family 2, TIM barrel;
n=1; Clostridium cellulolyticum H10|Rep: Glycoside
hydrolase family 2, TIM barrel - Clostridium
cellulolyticum H10
Length = 1033
Score = 35.5 bits (78), Expect = 1.3
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +2
Query: 563 RDWENPGVTQLNRLAAHPPFASWRNSEEA 649
R+WEN +TQ+NR H P+ ++ + E+A
Sbjct: 3 REWENQYITQINRYPMHSPYGAYESVEQA 31
>UniRef50_A1ZW82 Cluster: Putative uncharacterized protein; n=1;
Microscilla marina ATCC 23134|Rep: Putative
uncharacterized protein - Microscilla marina ATCC 23134
Length = 980
Score = 35.1 bits (77), Expect = 1.8
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = -2
Query: 527 THYRANWYRAPACRGFLAL-MVRYGINRTTTDRTANDVRHHEYLYHVMDAPEIPDA 363
+++RA + R R L M++ I R+ T+R H EYL H++D+ ++P+A
Sbjct: 838 SNFRALFSRVSVLRHEADLNMLKDAIERSYTEREKPPATHREYLIHLIDSGQLPEA 893
>UniRef50_Q9JN59 Cluster: Beta-galactosidase; n=16; Vibrio
cholerae|Rep: Beta-galactosidase - Vibrio cholerae
Length = 56
Score = 34.3 bits (75), Expect = 3.1
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 551 VLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTD 658
+L +DW+NP + + + H P S+R +EAR D
Sbjct: 7 ILLSQDWQNPHIVKWHCRTPHVPLHSYRTEQEARLD 42
>UniRef50_UPI0000F1EDC6 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 195
Score = 33.9 bits (74), Expect = 4.1
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +2
Query: 539 SLAVVLQRRDWENP 580
SLAVVLQRRDWENP
Sbjct: 178 SLAVVLQRRDWENP 191
>UniRef50_Q60PF9 Cluster: Putative uncharacterized protein CBG22267;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG22267 - Caenorhabditis
briggsae
Length = 530
Score = 33.9 bits (74), Expect = 4.1
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -2
Query: 410 HEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 273
HEYLY ++D I + YD+ R+ +++ + ++ T SP G
Sbjct: 73 HEYLYRILDTGHIQELAYDKRSRQWKDMIIGNIDIGTDSSPAFPTG 118
>UniRef50_Q21948 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 1656
Score = 33.9 bits (74), Expect = 4.1
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -2
Query: 392 VMDAPEIPDAEYDRLMRELRELETK-HPELITPDSPTQR 279
V+ +PEIPD R M L +LE+K P+ P +PT++
Sbjct: 1424 VVSSPEIPDVSLQRSMENLHKLESKVKPQPPYPQTPTKK 1462
>UniRef50_Q755S7 Cluster: AER441Cp; n=2; Saccharomycetaceae|Rep:
AER441Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 818
Score = 33.9 bits (74), Expect = 4.1
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Frame = -2
Query: 572 PSHDVVKRRPVNCNTTHYRANWYRAPACRGFLALMVRYGINRTTTDRTANDV--RHHEYL 399
PS ++ R + TT +++ + L++R +NRTT+ AN+ R H L
Sbjct: 230 PSQKLIIREDSDSTTTVANLSYHTPETVEDVMDLVIRGNVNRTTSPTDANETSSRSHAVL 289
Query: 398 -YHVMDAPEIPDAEYDRLMREL 336
HV+ + D + D++ L
Sbjct: 290 QVHVVQSSRTVDLKEDKMYATL 311
>UniRef50_Q3F000 Cluster: NAD-dependent DNA ligase; n=1; Bacillus
thuringiensis serovar israelensis ATCC 35646|Rep:
NAD-dependent DNA ligase - Bacillus thuringiensis
serovar israelensis ATCC 35646
Length = 468
Score = 33.1 bits (72), Expect = 7.2
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -1
Query: 150 NEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTI 7
+E VT LK +G + I Y +G VSA +R + G+D+T V +
Sbjct: 99 DEPVTLHGSLKENGWGIRIAYMDGEYVSATSRARASAGKDLTRQVGVV 146
>UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09076 protein - Schistosoma
japonicum (Blood fluke)
Length = 109
Score = 33.1 bits (72), Expect = 7.2
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +2
Query: 545 AVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQ 670
A L+RR+ +NPG QLN L A P F +++A +R S+
Sbjct: 57 AAFLKRREGKNPGCPQLNPLEALPLFPGGEKTKKAPPNRLSK 98
>UniRef50_A5KA00 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 1943
Score = 33.1 bits (72), Expect = 7.2
Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = -2
Query: 464 RYGINRTT--TDRTANDVRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDS 291
+Y I+R D + D++ + ++Y ++ E+ D ++ L +++T+H +T
Sbjct: 768 KYNIHRYLFRNDVSKKDLKENYFIYKNIECSEMGRKHNDLYLKFLEDIQTQH--YVTGSG 825
Query: 290 PTQRVGAAPLAASA 249
+R GA P +A+A
Sbjct: 826 GNKRAGAGPSSANA 839
>UniRef50_A5YT37 Cluster: Probable cell surface glycoprotein; n=1;
uncultured haloarchaeon|Rep: Probable cell surface
glycoprotein - uncultured haloarchaeon
Length = 3077
Score = 33.1 bits (72), Expect = 7.2
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +2
Query: 482 TPDKRGP-GTNSPYSESYYNSLAVVLQRRDWENPGVTQLNRLAA---HPPFASWRNSEEA 649
TPD P GTN +S+ NS V R + G Q+NR A+ PPF+ + E A
Sbjct: 1377 TPDAVAPDGTNISFSDVSVNSTRVESIRINNTGDGALQINRSASSDPSPPFSLFTAGESA 1436
Query: 650 RTD 658
D
Sbjct: 1437 NAD 1439
>UniRef50_A6G4K3 Cluster: Putative uncharacterized protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Putative
uncharacterized protein - Plesiocystis pacifica SIR-1
Length = 531
Score = 32.7 bits (71), Expect = 9.5
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 564 VTGKTLALPNLIALQHIPLSPAGVIAKRPAPIAL 665
V+G L LP+L+ PL P G++A++ PIAL
Sbjct: 64 VSGPNLQLPHLVDELATPLPPTGLLARKMDPIAL 97
>UniRef50_A5VLF5 Cluster: Restriction modification system DNA
specificity domain; n=2; Lactobacillus|Rep: Restriction
modification system DNA specificity domain -
Lactobacillus reuteri F275
Length = 372
Score = 32.7 bits (71), Expect = 9.5
Identities = 11/36 (30%), Positives = 24/36 (66%)
Frame = -2
Query: 413 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPEL 306
+++YLY+ + A IP+ Y+R + L+++ +P+L
Sbjct: 92 NYKYLYYALKAAHIPNTGYNRHFKWLKQINMNYPDL 127
>UniRef50_Q0TZB9 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 785
Score = 32.7 bits (71), Expect = 9.5
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 428 QFCQLLFD*FHIAPSMLKTPDKRGPGTNSPYSESYYNSLAVVLQR 562
QFC+L H L D+R P ++ PY+ +Y+ LA +QR
Sbjct: 285 QFCELSIQLLHATVEQLSEQDQRLP-SDRPYTNNYFLDLAEQIQR 328
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 773,051,514
Number of Sequences: 1657284
Number of extensions: 16250068
Number of successful extensions: 49106
Number of sequences better than 10.0: 155
Number of HSP's better than 10.0 without gapping: 47088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49017
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 59090914597
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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