Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0815.Seq
         (726 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058317-1|AAL13546.1|  599|Drosophila melanogaster GH08073p pro...    30   2.8  
AY051795-1|AAK93219.1|  541|Drosophila melanogaster LD31064p pro...    30   2.8  
AL033125-6|CAA21829.1|  510|Drosophila melanogaster EG:EG0007.7 ...    30   2.8  
AE014298-602|AAF45923.3|  541|Drosophila melanogaster CG6121-PA ...    30   2.8  
AE014296-3545|AAF51731.1|  599|Drosophila melanogaster CG7199-PA...    30   2.8  
AE014296-2194|AAN11859.1| 1257|Drosophila melanogaster CG11006-P...    29   4.9  
AE014296-2193|AAN11858.1| 1294|Drosophila melanogaster CG11006-P...    29   4.9  
AE014296-2192|AAN11860.2| 1272|Drosophila melanogaster CG11006-P...    29   4.9  
AL138972-3|CAB72286.1| 2447|Drosophila melanogaster EG:BACR25B3....    29   6.4  
AJ487018-1|CAD31650.1| 4223|Drosophila melanogaster perlecan pro...    29   6.4  
AE014298-409|AAN09080.1| 3215|Drosophila melanogaster CG33950-PB...    29   6.4  
AE014298-408|AAN09079.1| 4223|Drosophila melanogaster CG33950-PD...    29   6.4  
AE014298-407|AAF45786.3| 4179|Drosophila melanogaster CG33950-PA...    29   6.4  
AE014298-406|AAN09078.1| 4228|Drosophila melanogaster CG33950-PE...    29   6.4  
AE014298-405|AAN09077.1| 4117|Drosophila melanogaster CG33950-PC...    29   6.4  
AE014298-404|AAF45787.2| 4629|Drosophila melanogaster CG33950-PF...    29   6.4  
AE013599-2500|AAF57841.1|  817|Drosophila melanogaster CG18432-P...    29   6.4  

>AY058317-1|AAL13546.1|  599|Drosophila melanogaster GH08073p
           protein.
          Length = 599

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
 Frame = -1

Query: 402 SLSCDGCAGNSRR*IRQADARTARAGNQTSRTDYA*FAYSTCR--RCAAGGFSQIRHE 235
           ++SC+GC G  +R IR+      R       T +       CR  +C A G   ++HE
Sbjct: 66  AISCEGCKGFFKRSIRKQLGYQCRGAMNCEVTKHHRNRCQFCRLQKCLASGMRTVQHE 123


>AY051795-1|AAK93219.1|  541|Drosophila melanogaster LD31064p
           protein.
          Length = 541

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +3

Query: 588 PNLIALQHIPLSPAGVIAKRPAPIALPNSCAP 683
           P   AL  IP +P G     P P  +PNS AP
Sbjct: 119 PGSGALAAIPQTPTGASGSVPPPAGIPNSVAP 150


>AL033125-6|CAA21829.1|  510|Drosophila melanogaster EG:EG0007.7
           protein.
          Length = 510

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +3

Query: 588 PNLIALQHIPLSPAGVIAKRPAPIALPNSCAP 683
           P   AL  IP +P G     P P  +PNS AP
Sbjct: 87  PGSGALAAIPQTPTGASGSVPPPAGIPNSVAP 118


>AE014298-602|AAF45923.3|  541|Drosophila melanogaster CG6121-PA
           protein.
          Length = 541

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +3

Query: 588 PNLIALQHIPLSPAGVIAKRPAPIALPNSCAP 683
           P   AL  IP +P G     P P  +PNS AP
Sbjct: 119 PGSGALAAIPQTPTGASGSVPPPAGIPNSVAP 150


>AE014296-3545|AAF51731.1|  599|Drosophila melanogaster CG7199-PA,
           isoform A protein.
          Length = 599

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
 Frame = -1

Query: 402 SLSCDGCAGNSRR*IRQADARTARAGNQTSRTDYA*FAYSTCR--RCAAGGFSQIRHE 235
           ++SC+GC G  +R IR+      R       T +       CR  +C A G   ++HE
Sbjct: 66  AISCEGCKGFFKRSIRKQLGYQCRGAMNCEVTKHHRNRCQFCRLQKCLASGMRTVQHE 123


>AE014296-2194|AAN11859.1| 1257|Drosophila melanogaster CG11006-PB,
           isoform B protein.
          Length = 1257

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +3

Query: 567 TGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNSCA 680
           TG   A  +L++  H PL   GVI K   P  LP+S A
Sbjct: 26  TGSLSASASLVSHSHPPLQLRGVINKYSLPSHLPSSAA 63


>AE014296-2193|AAN11858.1| 1294|Drosophila melanogaster CG11006-PC,
           isoform C protein.
          Length = 1294

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +3

Query: 567 TGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNSCA 680
           TG   A  +L++  H PL   GVI K   P  LP+S A
Sbjct: 63  TGSLSASASLVSHSHPPLQLRGVINKYSLPSHLPSSAA 100


>AE014296-2192|AAN11860.2| 1272|Drosophila melanogaster CG11006-PD,
           isoform D protein.
          Length = 1272

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +3

Query: 567 TGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNSCA 680
           TG   A  +L++  H PL   GVI K   P  LP+S A
Sbjct: 41  TGSLSASASLVSHSHPPLQLRGVINKYSLPSHLPSSAA 78


>AL138972-3|CAB72286.1| 2447|Drosophila melanogaster EG:BACR25B3.1
           protein.
          Length = 2447

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = +3

Query: 609 HIPLSPAGVIAKRPAPIALPNSCAP-EWRMAN 701
           H P     VI  +  P  +P SC P EW+ AN
Sbjct: 743 HYPTQNVNVIRPKLGPNPIPKSCRPHEWQCAN 774


>AJ487018-1|CAD31650.1| 4223|Drosophila melanogaster perlecan
           protein.
          Length = 4223

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = +3

Query: 609 HIPLSPAGVIAKRPAPIALPNSCAP-EWRMAN 701
           H P     VI  +  P  +P SC P EW+ AN
Sbjct: 734 HYPTQNVNVIRPKLGPNPIPKSCRPHEWQCAN 765


>AE014298-409|AAN09080.1| 3215|Drosophila melanogaster CG33950-PB,
           isoform B protein.
          Length = 3215

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = +3

Query: 609 HIPLSPAGVIAKRPAPIALPNSCAP-EWRMAN 701
           H P     VI  +  P  +P SC P EW+ AN
Sbjct: 734 HYPTQNVNVIRPKLGPNPIPKSCRPHEWQCAN 765


>AE014298-408|AAN09079.1| 4223|Drosophila melanogaster CG33950-PD,
           isoform D protein.
          Length = 4223

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = +3

Query: 609 HIPLSPAGVIAKRPAPIALPNSCAP-EWRMAN 701
           H P     VI  +  P  +P SC P EW+ AN
Sbjct: 734 HYPTQNVNVIRPKLGPNPIPKSCRPHEWQCAN 765


>AE014298-407|AAF45786.3| 4179|Drosophila melanogaster CG33950-PA,
           isoform A protein.
          Length = 4179

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = +3

Query: 609 HIPLSPAGVIAKRPAPIALPNSCAP-EWRMAN 701
           H P     VI  +  P  +P SC P EW+ AN
Sbjct: 734 HYPTQNVNVIRPKLGPNPIPKSCRPHEWQCAN 765


>AE014298-406|AAN09078.1| 4228|Drosophila melanogaster CG33950-PE,
           isoform E protein.
          Length = 4228

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = +3

Query: 609 HIPLSPAGVIAKRPAPIALPNSCAP-EWRMAN 701
           H P     VI  +  P  +P SC P EW+ AN
Sbjct: 734 HYPTQNVNVIRPKLGPNPIPKSCRPHEWQCAN 765


>AE014298-405|AAN09077.1| 4117|Drosophila melanogaster CG33950-PC,
           isoform C protein.
          Length = 4117

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = +3

Query: 609 HIPLSPAGVIAKRPAPIALPNSCAP-EWRMAN 701
           H P     VI  +  P  +P SC P EW+ AN
Sbjct: 734 HYPTQNVNVIRPKLGPNPIPKSCRPHEWQCAN 765


>AE014298-404|AAF45787.2| 4629|Drosophila melanogaster CG33950-PF,
            isoform F protein.
          Length = 4629

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = +3

Query: 609  HIPLSPAGVIAKRPAPIALPNSCAP-EWRMAN 701
            H P     VI  +  P  +P SC P EW+ AN
Sbjct: 1140 HYPTQNVNVIRPKLGPNPIPKSCRPHEWQCAN 1171


>AE013599-2500|AAF57841.1|  817|Drosophila melanogaster CG18432-PA
           protein.
          Length = 817

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
 Frame = -2

Query: 395 HVMDAPEIPDAEYDRLM-RELRELETKHPELITPDSPTQRVGAAPLAASARYAMKYQCCH 219
           H+ D   +PDA    L+ + L  L     EL+TP  P+ R+  + L +      + Q C 
Sbjct: 565 HLDDVQRLPDALRQTLLPQSLPALPQASKELVTPRPPSGRIKKSQLPSLIFAEQQLQFCG 624

Query: 218 WITFLMKKAFLL 183
               L  + F L
Sbjct: 625 LDVLLDNRRFQL 636


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,789,903
Number of Sequences: 53049
Number of extensions: 767332
Number of successful extensions: 2230
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2230
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)