Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0815.Seq
(726 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical p... 34 0.12
Z81523-2|CAB04248.1| 928|Caenorhabditis elegans Hypothetical pr... 31 0.63
Z81523-1|CAB04241.1| 944|Caenorhabditis elegans Hypothetical pr... 31 0.63
AY204173-1|AAO39177.1| 369|Caenorhabditis elegans nuclear recep... 31 0.63
AF043694-1|AAC24283.1| 412|Caenorhabditis elegans Nuclear hormo... 31 0.63
AC006795-4|AAK84612.2| 430|Caenorhabditis elegans Hypothetical ... 31 0.84
AF038606-5|AAB92024.2| 352|Caenorhabditis elegans Hypothetical ... 31 1.1
U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated p... 30 1.9
D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine recep... 30 1.9
Z82285-9|CAB05303.1| 513|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z82264-13|CAB05168.1| 513|Caenorhabditis elegans Hypothetical p... 29 3.4
AL132952-25|CAB63388.1| 513|Caenorhabditis elegans Hypothetical... 29 3.4
AL132846-9|CAB63368.1| 513|Caenorhabditis elegans Hypothetical ... 29 3.4
Z80216-9|CAH10778.1| 403|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z80216-8|CAB02284.2| 261|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical p... 28 5.9
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z81458-3|CAB03823.2| 487|Caenorhabditis elegans Hypothetical pr... 28 7.8
AL031635-4|CAA21043.2| 269|Caenorhabditis elegans Hypothetical ... 28 7.8
AF251126-1|AAF71273.1| 487|Caenorhabditis elegans UDP-GlcNAc:a-... 28 7.8
>U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical
protein R11G1.1 protein.
Length = 1656
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -2
Query: 392 VMDAPEIPDAEYDRLMRELRELETK-HPELITPDSPTQR 279
V+ +PEIPD R M L +LE+K P+ P +PT++
Sbjct: 1424 VVSSPEIPDVSLQRSMENLHKLESKVKPQPPYPQTPTKK 1462
>Z81523-2|CAB04248.1| 928|Caenorhabditis elegans Hypothetical
protein F32H2.1b protein.
Length = 928
Score = 31.5 bits (68), Expect = 0.63
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = +2
Query: 488 DKRGPGTNSPYSESYYNSLAVVLQRRDWENPGVTQLNRLAAHPPFASW 631
D +G T +YN L + W N V +L L P F SW
Sbjct: 226 DFKGSRTEWAVKSKWYNELNPKWNKEHWSNEEVEKLKYLRESPKFVSW 273
>Z81523-1|CAB04241.1| 944|Caenorhabditis elegans Hypothetical
protein F32H2.1a protein.
Length = 944
Score = 31.5 bits (68), Expect = 0.63
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = +2
Query: 488 DKRGPGTNSPYSESYYNSLAVVLQRRDWENPGVTQLNRLAAHPPFASW 631
D +G T +YN L + W N V +L L P F SW
Sbjct: 226 DFKGSRTEWAVKSKWYNELNPKWNKEHWSNEEVEKLKYLRESPKFVSW 273
>AY204173-1|AAO39177.1| 369|Caenorhabditis elegans nuclear receptor
NHR-64 protein.
Length = 369
Score = 31.5 bits (68), Expect = 0.63
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = -1
Query: 402 SLSCDGCAGNSRR*IRQADARTARAGNQTSRTDYA*FAYSTCRRC 268
++SCDGC G RR IR+ + R G + + D A ++CR+C
Sbjct: 41 AMSCDGCKGFFRRTIRKRHSYVCRFG-EKCQVDKA--KRNSCRKC 82
>AF043694-1|AAC24283.1| 412|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 64, isoform a protein.
Length = 412
Score = 31.5 bits (68), Expect = 0.63
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = -1
Query: 402 SLSCDGCAGNSRR*IRQADARTARAGNQTSRTDYA*FAYSTCRRC 268
++SCDGC G RR IR+ + R G + + D A ++CR+C
Sbjct: 84 AMSCDGCKGFFRRTIRKRHSYVCRFG-EKCQVDKA--KRNSCRKC 125
>AC006795-4|AAK84612.2| 430|Caenorhabditis elegans Hypothetical
protein Y50D4B.4 protein.
Length = 430
Score = 31.1 bits (67), Expect = 0.84
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = -1
Query: 219 LDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTT 40
L+ V D F +R + K N K W +L +DGL+V + + + G GT
Sbjct: 301 LERVEDYTENTVFLRRKNPKEKGNIK--WALDLNIDGLSVETVVIKIIGIDEIDNGGGTA 358
Query: 39 ---GEDITSNV 16
G D+TS V
Sbjct: 359 IACGHDLTSIV 369
>AF038606-5|AAB92024.2| 352|Caenorhabditis elegans Hypothetical
protein C04C3.3 protein.
Length = 352
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -2
Query: 365 AEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAASARYAMKYQCCHWITF 207
A+YD + + L KH + D+P +G A +A A +A C ++TF
Sbjct: 53 AQYDGAYKISKGLWKKHGDKRVVDTPITEMGFAGIAVGAAFAGLRPICEFMTF 105
>U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated
protein 68 protein.
Length = 5079
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/64 (21%), Positives = 31/64 (48%)
Frame = -2
Query: 392 VMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAASARYAMKYQCCHWI 213
V+ A P +D+ +R R+ +K + + ++ T +G ++ + Y +Y C WI
Sbjct: 4761 VVSAKSFPMMYWDKFVR--RKTRSKFKDQVDEETLTSILGEEKMSTDSSYDYRYSCWLWI 4818
Query: 212 TFLM 201
++
Sbjct: 4819 GVIL 4822
>D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine receptor
protein.
Length = 5071
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/64 (21%), Positives = 31/64 (48%)
Frame = -2
Query: 392 VMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAASARYAMKYQCCHWI 213
V+ A P +D+ +R R+ +K + + ++ T +G ++ + Y +Y C WI
Sbjct: 4753 VVSAKSFPMMYWDKFVR--RKTRSKFKDQVDEETLTSILGEEKMSTDSSYDYRYSCWLWI 4810
Query: 212 TFLM 201
++
Sbjct: 4811 GVIL 4814
>Z82285-9|CAB05303.1| 513|Caenorhabditis elegans Hypothetical
protein T28F3.9 protein.
Length = 513
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 506 TNSPYSESYYNSLAVVLQRRDWENPGVTQLNRLAAH 613
TN +E YY + V+ +D +NPG LN +H
Sbjct: 470 TNIKMNEKYYEEMVTVIYHKDHKNPGY-HLNCTPSH 504
>Z82264-13|CAB05168.1| 513|Caenorhabditis elegans Hypothetical
protein T28F3.9 protein.
Length = 513
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 506 TNSPYSESYYNSLAVVLQRRDWENPGVTQLNRLAAH 613
TN +E YY + V+ +D +NPG LN +H
Sbjct: 470 TNIKMNEKYYEEMVTVIYHKDHKNPGY-HLNCTPSH 504
>AL132952-25|CAB63388.1| 513|Caenorhabditis elegans Hypothetical
protein Y51H4A.25a protein.
Length = 513
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 506 TNSPYSESYYNSLAVVLQRRDWENPGVTQLNRLAAH 613
TN +E YY + V+ +D +NPG LN +H
Sbjct: 470 TNIKLNEKYYEEMVTVIYHKDHKNPGY-HLNCTPSH 504
>AL132846-9|CAB63368.1| 513|Caenorhabditis elegans Hypothetical
protein Y51H4A.25a protein.
Length = 513
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 506 TNSPYSESYYNSLAVVLQRRDWENPGVTQLNRLAAH 613
TN +E YY + V+ +D +NPG LN +H
Sbjct: 470 TNIKLNEKYYEEMVTVIYHKDHKNPGY-HLNCTPSH 504
>Z80216-9|CAH10778.1| 403|Caenorhabditis elegans Hypothetical
protein F10G8.9b protein.
Length = 403
Score = 28.3 bits (60), Expect = 5.9
Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Frame = -1
Query: 384 CAGNSRR*IRQADARTARAGN-QTSRTDYA*FAYSTCRRCAAGGFSQIRHEVPMLSLDNV 208
C GNS R IR D+R A AG + + A + R A G I V
Sbjct: 160 CIGNSFRSIRYGDSRRALAGAVECALNPIALAGFDRMRALARGDQPNISRPFDKKRAGFV 219
Query: 207 FDEESFLAFNKRVQD 163
E L F +R++D
Sbjct: 220 MSEGVGLVFMERLED 234
>Z80216-8|CAB02284.2| 261|Caenorhabditis elegans Hypothetical
protein F10G8.9a protein.
Length = 261
Score = 28.3 bits (60), Expect = 5.9
Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Frame = -1
Query: 384 CAGNSRR*IRQADARTARAGN-QTSRTDYA*FAYSTCRRCAAGGFSQIRHEVPMLSLDNV 208
C GNS R IR D+R A AG + + A + R A G I V
Sbjct: 18 CIGNSFRSIRYGDSRRALAGAVECALNPIALAGFDRMRALARGDQPNISRPFDKKRAGFV 77
Query: 207 FDEESFLAFNKRVQD 163
E L F +R++D
Sbjct: 78 MSEGVGLVFMERLED 92
>Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical
protein C36B1.9 protein.
Length = 674
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = +3
Query: 480 KPPTSGGPVPIRPIVS 527
+PPTSG PVP+RP+V+
Sbjct: 272 RPPTSG-PVPVRPLVA 286
>Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical
protein K08E7.5c protein.
Length = 896
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +2
Query: 497 GPGTNSPYSESYYNSLAVVLQRRD---WENPGVTQLNRLAAHPPFASWRNSEEARTDRPS 667
GPGT S YSE S A + D +E P + + +P +SW + + A PS
Sbjct: 332 GPGTESGYSEPKALSTASQKTKPDDKPYEIPRSIEPSNSKPYPSDSSWSDHDNAPGSEPS 391
>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical
protein K08E7.5a protein.
Length = 1221
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +2
Query: 497 GPGTNSPYSESYYNSLAVVLQRRD---WENPGVTQLNRLAAHPPFASWRNSEEARTDRPS 667
GPGT S YSE S A + D +E P + + +P +SW + + A PS
Sbjct: 657 GPGTESGYSEPKALSTASQKTKPDDKPYEIPRSIEPSNSKPYPSDSSWSDHDNAPGSEPS 716
>Z81458-3|CAB03823.2| 487|Caenorhabditis elegans Hypothetical
protein C03E10.4 protein.
Length = 487
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -1
Query: 267 AAGGFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKN 151
A G ++R VP+LS + V+ + NK V D LKN
Sbjct: 29 APGEDQRLRDGVPVLSQNPVWSVNDWNGLNKEVVDLLKN 67
>AL031635-4|CAA21043.2| 269|Caenorhabditis elegans Hypothetical
protein Y47D3B.6 protein.
Length = 269
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +3
Query: 612 IPLSPAGVIAKRPAPIALPNS-CAP 683
IP++PA V+A R P ALP S C P
Sbjct: 145 IPVAPAPVVAGRLIPQALPGSPCEP 169
>AF251126-1|AAF71273.1| 487|Caenorhabditis elegans
UDP-GlcNAc:a-6-D-mannoside
b1,2-N-acetylglucosaminyltransferase II protein.
Length = 487
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -1
Query: 267 AAGGFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKN 151
A G ++R VP+LS + V+ + NK V D LKN
Sbjct: 29 APGEDQRLRDGVPVLSQNPVWSVNDWNGLNKEVVDLLKN 67
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,351,723
Number of Sequences: 27780
Number of extensions: 374207
Number of successful extensions: 1202
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1202
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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