Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0813.Seq
(656 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 176 3e-45
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 103 2e-23
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 101 1e-22
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 99 6e-22
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 72 8e-14
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 64 2e-11
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 57 3e-09
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 43 3e-05
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 38 0.001
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 30 0.26
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 28 1.0
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 1.8
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 27 3.1
SPAC1296.04 |mug65||spore wall assembly protein |Schizosaccharom... 27 3.1
SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces p... 26 4.2
SPBC317.01 |mbx2|pvg4|MADS-box transcription factor Pvg4|Schizos... 25 7.3
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 25 7.3
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 25 7.3
SPAC18B11.06 |||U3 snoRNP-associated protein Lcp5 |Schizosacchar... 25 9.6
SPBC1105.04c |cbp1|abp1|CENP-B homolog|Schizosaccharomyces pombe... 25 9.6
SPAC343.16 |lys2||homoaconitate hydratase Lys2|Schizosaccharomyc... 25 9.6
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 176 bits (428), Expect = 3e-45
Identities = 78/85 (91%), Positives = 82/85 (96%)
Frame = +2
Query: 254 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 433
LKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPK+NREKMTQI+FET
Sbjct: 67 LKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPCLLTEAPLNPKSNREKMTQIIFET 126
Query: 434 FNSPAMYVAIQAVLSLYASGRTTGI 508
FN+PA YVAIQAVLSLYASGRTTGI
Sbjct: 127 FNAPAFYVAIQAVLSLYASGRTTGI 151
Score = 126 bits (304), Expect = 3e-30
Identities = 56/64 (87%), Positives = 62/64 (96%)
Frame = +3
Query: 60 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGYEAQSK 239
++++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH G+MVGMGQKDSYVG EAQSK
Sbjct: 2 EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMVGMGQKDSYVGDEAQSK 61
Query: 240 RGIL 251
RGIL
Sbjct: 62 RGIL 65
Score = 97.5 bits (232), Expect = 1e-21
Identities = 43/49 (87%), Positives = 47/49 (95%)
Frame = +1
Query: 508 LLDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 654
+LDSGDGV+H VPIYEGYALPHAI+RLDLAGRDLTDYLMKIL ERGY+F
Sbjct: 152 VLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILMERGYTF 200
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 103 bits (247), Expect = 2e-23
Identities = 43/85 (50%), Positives = 65/85 (76%)
Frame = +2
Query: 254 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 433
+KYP+E+GII ++++M ++W +TF+ +L++ P +LLTE P+NP ANREKM + MFE
Sbjct: 67 VKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPPMNPVANREKMCETMFER 126
Query: 434 FNSPAMYVAIQAVLSLYASGRTTGI 508
+ +YVAIQAVLSLYA G ++G+
Sbjct: 127 YGFGGVYVAIQAVLSLYAQGLSSGV 151
Score = 64.9 bits (151), Expect = 1e-11
Identities = 27/49 (55%), Positives = 37/49 (75%)
Frame = +1
Query: 508 LLDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 654
++DSGDGV+H VP+YE L H + RLD+AGRD T YL+ +L +GY+F
Sbjct: 152 VVDSGDGVTHIVPVYESVVLNHLVGRLDVAGRDATRYLISLLLRKGYAF 200
Score = 53.2 bits (122), Expect = 3e-08
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Frame = +3
Query: 72 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGYEAQSKRG 245
A +V+DNG+G K G+A D+ PR FPSIVGRP R + + KD VG EA++ R
Sbjct: 4 APIVLDNGTGFVKVGYAKDNFPRFQFPSIVGRPILRAEEKTGNVQIKDVMVGDEAEAVRS 63
Query: 246 IL 251
+L
Sbjct: 64 LL 65
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 101 bits (241), Expect = 1e-22
Identities = 44/79 (55%), Positives = 54/79 (68%)
Frame = +2
Query: 254 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 433
L YPI HG I NWD ME+ W + + LR PE+H LLTE PLNP NRE +IMFE+
Sbjct: 90 LDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFES 149
Query: 434 FNSPAMYVAIQAVLSLYAS 490
FN +Y+A+QAVL+L AS
Sbjct: 150 FNCAGLYIAVQAVLALAAS 168
Score = 51.2 bits (117), Expect = 1e-07
Identities = 22/51 (43%), Positives = 35/51 (68%)
Frame = +1
Query: 490 RSYHRYLLDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 642
RS ++DSGDGV+H +P+ EGY + +I + LAGRD+T ++ +L +R
Sbjct: 177 RSLTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDR 227
Score = 42.3 bits (95), Expect = 6e-05
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Frame = +3
Query: 78 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKDSYV 218
+++DNG+G K G+AG+DAP VFP+++ R G G + K SY+
Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPTVIA-TRSAGASSGPAVSSKPSYM 55
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 98.7 bits (235), Expect = 6e-22
Identities = 45/86 (52%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 LKYPIEHGIITNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 430
++ PIE GII NW DME+IW + + ++ L PEEHP+LLTE PL N+EK+ + +E
Sbjct: 71 IQRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEHPLLLTEPPLANIRNKEKIAEYFYE 130
Query: 431 TFNSPAMYVAIQAVLSLYASGRTTGI 508
T N PA+ ++Q VL+LYAS RTTGI
Sbjct: 131 TLNVPALSFSLQPVLALYASARTTGI 156
Score = 75.4 bits (177), Expect = 7e-15
Identities = 34/62 (54%), Positives = 44/62 (70%)
Frame = +3
Query: 66 DVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGYEAQSKRG 245
D + +DNGSG KAGFAGDD P+ +FP+ VGR +H+ VM QKD +VG EAQ+ RG
Sbjct: 8 DNQPICIDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHERVMPSSIQKDMFVGSEAQNLRG 67
Query: 246 IL 251
+L
Sbjct: 68 LL 69
Score = 56.8 bits (131), Expect = 3e-09
Identities = 22/47 (46%), Positives = 37/47 (78%)
Frame = +1
Query: 508 LLDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGY 648
+L+ GDG++H+VPIY+G+++P AI + ++ GRD+TDYL L + G+
Sbjct: 157 VLECGDGLTHSVPIYDGFSIPSAIQQEEIGGRDVTDYLQLQLRKSGH 203
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 71.7 bits (168), Expect = 8e-14
Identities = 39/108 (36%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Frame = +2
Query: 185 DGR--YGPERLLRGXRGPEQERYPHLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEH 358
DGR +G E + + G E +K I +G + NWD +W + +L+ P EH
Sbjct: 46 DGRRLFGEEYIYKSNPGME------IKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEH 99
Query: 359 PVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT 502
P+L+TE NP NR K + MFE+ PA Y+A Q + +ASG+ T
Sbjct: 100 PILITEPFDNPPENRVKTLETMFESLRCPATYLAKQETCAAFASGKGT 147
Score = 40.7 bits (91), Expect = 2e-04
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +3
Query: 63 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 164
D+V+A+V+D GS + GF+G+D P+ V PS G
Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCG 42
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 64.1 bits (149), Expect = 2e-11
Identities = 28/74 (37%), Positives = 45/74 (60%)
Frame = +2
Query: 263 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 442
P E +I+NWD ME++ +TF +L + EHP+ +TE NP R MT+++FE +N+
Sbjct: 86 PFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICMTEPLANPTYVRSTMTELLFELYNA 144
Query: 443 PAMYVAIQAVLSLY 484
P++ I + S Y
Sbjct: 145 PSVAYGIDGLFSFY 158
Score = 37.1 bits (82), Expect = 0.002
Identities = 20/55 (36%), Positives = 33/55 (60%)
Frame = +3
Query: 9 ESIPASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 173
E + + PT + F+ +D+ LV+DNGS +AG+ G+ P+ VF ++V R R
Sbjct: 8 EPVFSGPTPS---FQNVSNDIP-LVIDNGSWQLRAGWGGEKDPKLVFDNLVSRYR 58
Score = 28.3 bits (60), Expect = 1.0
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +1
Query: 508 LLDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 654
+L+ G+ SH +P+ G + R+ G + YL+K+ + SF
Sbjct: 169 VLNLGNAASHVIPVLNGERILSEAKRISWGGSQSSSYLLKLFQIKYPSF 217
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 56.8 bits (131), Expect = 3e-09
Identities = 24/79 (30%), Positives = 46/79 (58%)
Frame = +2
Query: 272 HGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAM 451
+GII +W+ W +L+V P E+ +++TE NP++ R+++ + FE + PA
Sbjct: 74 NGIIQDWESTLYTWERGLKEKLQVNPTEYAMMITEPSWNPQSVRQQIMEAAFEQLHVPAF 133
Query: 452 YVAIQAVLSLYASGRTTGI 508
Y+ QAV +A+ ++T +
Sbjct: 134 YLTKQAVCVAFANSKSTAL 152
Score = 34.3 bits (75), Expect = 0.016
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +3
Query: 63 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 164
+++ +LV+D GS + G+AG+++P + PS G
Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPSYYG 41
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 43.2 bits (97), Expect = 3e-05
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Frame = +2
Query: 248 PHLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEE----HPVLLTEAPLNPKANREKMT 415
P+ PI+ G + +W+ ++ W H Y+ L P + +PV L +RE T
Sbjct: 108 PNEIQPIQRGRVVDWEALKAFWKH-LYSLLLKDPNDTTFRYPVCLVIPTYWSLYDRELAT 166
Query: 416 QIMFETFNSPAMYVAIQAVLSLYASGRTTGI 508
Q FE P +A + ++ LYA G G+
Sbjct: 167 QFFFEECQVPGFTIAYEPLMGLYAIGILHGL 197
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 38.3 bits (85), Expect = 0.001
Identities = 15/48 (31%), Positives = 31/48 (64%)
Frame = +1
Query: 508 LLDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 651
++DSG +H +P+ + A+ R+D+ G+ LT+YL ++++ R Y+
Sbjct: 160 VIDSGYSFTHIIPVIDFSVQEQAVKRVDVGGKLLTNYLKEVISYRKYN 207
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 30.3 bits (65), Expect = 0.26
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Frame = +2
Query: 323 FYNELRVAPEEHPVLLTE--APLNPKANREKMTQIMFETFNSPAM---YVAIQ 466
+Y L E+HP+LLT+ A L P+ + ++ +I ++ N+P + VAIQ
Sbjct: 1399 YYRALNFYLEQHPMLLTDLLAALTPRIDHPRVIRIFEKSENTPLILNFMVAIQ 1451
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 28.3 bits (60), Expect = 1.0
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 123 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGYEAQSKRG 245
G+ PRA F ++ P H G+++ M KD G E S +G
Sbjct: 502 GNQNPRATFVPLLCLPEHGGMVISM--KDWIGGEEFMSPKG 540
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.5 bits (58), Expect = 1.8
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Frame = +3
Query: 426 LRPSTPPPCT-----LPSRPCSRCTPPVVPPVSARLRRWCLPQRTHLRRLRSAPRHPPS 587
L P PPP + +P P R PP PP SA P + R + + P PP+
Sbjct: 336 LPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPA 394
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 26.6 bits (56), Expect = 3.1
Identities = 18/50 (36%), Positives = 20/50 (40%)
Frame = +3
Query: 432 PSTPPPCTLPSRPCSRCTPPVVPPVSARLRRWCLPQRTHLRRLRSAPRHP 581
PS+P T P TP V P S RLR P L +RS P
Sbjct: 399 PSSPTFSTRSFSPTPDVTPLVTPAHSPRLRPMDDPSCVQLPSIRSLSLRP 448
>SPAC1296.04 |mug65||spore wall assembly protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 26.6 bits (56), Expect = 3.1
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +2
Query: 548 STKVTLCPTPSSVWTW 595
STK CP PS W W
Sbjct: 52 STKTATCPDPSWEWAW 67
>SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 226
Score = 26.2 bits (55), Expect = 4.2
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +2
Query: 365 LLTEAPLNPKANREKMTQIMFETFN 439
+L APL+ + +KM +++FET+N
Sbjct: 181 VLETAPLHAEEVSKKMKELLFETYN 205
>SPBC317.01 |mbx2|pvg4|MADS-box transcription factor
Pvg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 372
Score = 25.4 bits (53), Expect = 7.3
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = +3
Query: 495 VPPVSARLRRWCLPQRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPH 635
V + +++ +C P+ +RS P PP+ R PH PH
Sbjct: 136 VQDYNPQVQSYCRPEPLSSNHVRSCPPFPPTQHHHPH-TRPPHHPPH 181
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 25.4 bits (53), Expect = 7.3
Identities = 9/36 (25%), Positives = 21/36 (58%)
Frame = +1
Query: 547 IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 654
+ EG +P++ ++++ G D+T MK+L + +
Sbjct: 308 VEEGVVVPNSRIKINYGGDDITLLFMKLLMRSHFPY 343
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 25.4 bits (53), Expect = 7.3
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 441 PPPCTLPSRPCSRCTPPVVPPVSA 512
PPP +P + T PV PV+A
Sbjct: 366 PPPPVMPQPAAAAVTTPVAAPVAA 389
>SPAC18B11.06 |||U3 snoRNP-associated protein Lcp5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 327
Score = 25.0 bits (52), Expect = 9.6
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 549 LRRLRSAPRHPPSGLGWSRLDRLPHED 629
L++ + +H G WS LDR H+D
Sbjct: 254 LKKSKRVKKHDYGGEDWSLLDRKFHDD 280
>SPBC1105.04c |cbp1|abp1|CENP-B homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 25.0 bits (52), Expect = 9.6
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = -2
Query: 286 GDDTVLDGVLQVRIPLLLWASXPT*ESFWPIPTITPWW 173
GDD L G R +LW P + P+P + W
Sbjct: 94 GDDATLSGETIKRAAAILWHKIPEYQD-QPVPNFSNGW 130
>SPAC343.16 |lys2||homoaconitate hydratase Lys2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 721
Score = 25.0 bits (52), Expect = 9.6
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +1
Query: 517 SGDGVSHNVPIYEGYALP 570
+G G+ H + + +GYA+P
Sbjct: 157 AGRGIGHQIMVEQGYAMP 174
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,731,177
Number of Sequences: 5004
Number of extensions: 59321
Number of successful extensions: 266
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 264
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 297805304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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