Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0813.Seq
(656 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 185 3e-47
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 185 3e-47
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 184 4e-47
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 184 4e-47
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 184 4e-47
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 184 4e-47
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 184 4e-47
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 184 4e-47
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 184 4e-47
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 184 4e-47
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 181 5e-46
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 140 1e-33
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 140 1e-33
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 138 3e-33
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 138 3e-33
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 131 4e-31
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 107 7e-24
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 99 2e-21
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 84 1e-16
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 37 0.014
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 37 0.014
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.54
U80448-9|AAB37822.2| 577|Caenorhabditis elegans Hypothetical pr... 31 0.72
AL132898-19|CAN99707.1| 258|Caenorhabditis elegans Hypothetical... 31 0.95
AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 30 1.7
AL132949-11|CAB70104.2| 927|Caenorhabditis elegans Hypothetical... 29 2.2
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 29 2.2
Z49069-2|CAA88865.1| 333|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z68113-2|CAA92149.2| 327|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical pr... 29 3.8
U33919-1|AAA96505.1| 327|Caenorhabditis elegans MEC-5 precursor... 29 3.8
U33918-1|AAA96504.1| 327|Caenorhabditis elegans MEC-5 protein. 29 3.8
AC024754-1|AAK71405.1| 394|Caenorhabditis elegans Hypothetical ... 29 3.8
Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical pr... 28 5.1
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 28 5.1
AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily a... 28 5.1
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 28 6.7
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 28 6.7
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 28 6.7
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 28 6.7
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 28 6.7
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 6.7
AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical ... 28 6.7
Z81104-3|CAD89749.1| 660|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z68750-1|CAA92963.1| 284|Caenorhabditis elegans Hypothetical pr... 27 8.9
U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical pr... 27 8.9
AF000196-8|AAL11096.1| 624|Caenorhabditis elegans Hypothetical ... 27 8.9
AF000196-7|AAC24251.2| 706|Caenorhabditis elegans Hypothetical ... 27 8.9
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 185 bits (450), Expect = 3e-47
Identities = 83/85 (97%), Positives = 85/85 (100%)
Frame = +2
Query: 254 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 433
LKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 434 FNSPAMYVAIQAVLSLYASGRTTGI 508
FN+PAMYVAIQAVLSLYASGRTTGI
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGI 152
Score = 140 bits (338), Expect = 1e-33
Identities = 65/66 (98%), Positives = 65/66 (98%)
Frame = +3
Query: 54 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGYEAQ 233
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 234 SKRGIL 251
SKRGIL
Sbjct: 61 SKRGIL 66
Score = 101 bits (243), Expect = 3e-22
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = +1
Query: 508 LLDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 654
+LDSGDGV+H VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 153 VLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 185 bits (450), Expect = 3e-47
Identities = 83/85 (97%), Positives = 85/85 (100%)
Frame = +2
Query: 254 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 433
LKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 434 FNSPAMYVAIQAVLSLYASGRTTGI 508
FN+PAMYVAIQAVLSLYASGRTTGI
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGI 152
Score = 138 bits (334), Expect = 3e-33
Identities = 63/66 (95%), Positives = 65/66 (98%)
Frame = +3
Query: 54 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGYEAQ 233
MCDDDVAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 234 SKRGIL 251
SKRGIL
Sbjct: 61 SKRGIL 66
Score = 101 bits (243), Expect = 3e-22
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = +1
Query: 508 LLDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 654
+LDSGDGV+H VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 153 VLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 184 bits (449), Expect = 4e-47
Identities = 82/85 (96%), Positives = 85/85 (100%)
Frame = +2
Query: 254 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 433
LKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 434 FNSPAMYVAIQAVLSLYASGRTTGI 508
FN+PAMYVAIQAVLSLYASGRTTG+
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGV 152
Score = 138 bits (334), Expect = 3e-33
Identities = 64/66 (96%), Positives = 65/66 (98%)
Frame = +3
Query: 54 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGYEAQ 233
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 234 SKRGIL 251
SKRGIL
Sbjct: 61 SKRGIL 66
Score = 101 bits (243), Expect = 3e-22
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = +1
Query: 508 LLDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 654
+LDSGDGV+H VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 153 VLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 184 bits (449), Expect = 4e-47
Identities = 82/85 (96%), Positives = 85/85 (100%)
Frame = +2
Query: 254 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 433
LKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 434 FNSPAMYVAIQAVLSLYASGRTTGI 508
FN+PAMYVAIQAVLSLYASGRTTG+
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGV 152
Score = 138 bits (334), Expect = 3e-33
Identities = 64/66 (96%), Positives = 65/66 (98%)
Frame = +3
Query: 54 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGYEAQ 233
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 234 SKRGIL 251
SKRGIL
Sbjct: 61 SKRGIL 66
Score = 101 bits (243), Expect = 3e-22
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = +1
Query: 508 LLDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 654
+LDSGDGV+H VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 153 VLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 184 bits (449), Expect = 4e-47
Identities = 82/85 (96%), Positives = 85/85 (100%)
Frame = +2
Query: 254 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 433
LKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 434 FNSPAMYVAIQAVLSLYASGRTTGI 508
FN+PAMYVAIQAVLSLYASGRTTG+
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGV 152
Score = 138 bits (334), Expect = 3e-33
Identities = 64/66 (96%), Positives = 65/66 (98%)
Frame = +3
Query: 54 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGYEAQ 233
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 234 SKRGIL 251
SKRGIL
Sbjct: 61 SKRGIL 66
Score = 101 bits (243), Expect = 3e-22
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = +1
Query: 508 LLDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 654
+LDSGDGV+H VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 153 VLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 184 bits (449), Expect = 4e-47
Identities = 82/85 (96%), Positives = 85/85 (100%)
Frame = +2
Query: 254 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 433
LKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 434 FNSPAMYVAIQAVLSLYASGRTTGI 508
FN+PAMYVAIQAVLSLYASGRTTG+
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGV 152
Score = 138 bits (334), Expect = 3e-33
Identities = 64/66 (96%), Positives = 65/66 (98%)
Frame = +3
Query: 54 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGYEAQ 233
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 234 SKRGIL 251
SKRGIL
Sbjct: 61 SKRGIL 66
Score = 101 bits (243), Expect = 3e-22
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = +1
Query: 508 LLDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 654
+LDSGDGV+H VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 153 VLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 184 bits (449), Expect = 4e-47
Identities = 82/85 (96%), Positives = 85/85 (100%)
Frame = +2
Query: 254 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 433
LKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 434 FNSPAMYVAIQAVLSLYASGRTTGI 508
FN+PAMYVAIQAVLSLYASGRTTG+
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGV 152
Score = 138 bits (334), Expect = 3e-33
Identities = 64/66 (96%), Positives = 65/66 (98%)
Frame = +3
Query: 54 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGYEAQ 233
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 234 SKRGIL 251
SKRGIL
Sbjct: 61 SKRGIL 66
Score = 101 bits (243), Expect = 3e-22
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = +1
Query: 508 LLDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 654
+LDSGDGV+H VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 153 VLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 184 bits (449), Expect = 4e-47
Identities = 82/85 (96%), Positives = 85/85 (100%)
Frame = +2
Query: 254 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 433
LKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 24 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 83
Query: 434 FNSPAMYVAIQAVLSLYASGRTTGI 508
FN+PAMYVAIQAVLSLYASGRTTG+
Sbjct: 84 FNTPAMYVAIQAVLSLYASGRTTGV 108
Score = 101 bits (243), Expect = 3e-22
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = +1
Query: 508 LLDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 654
+LDSGDGV+H VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 109 VLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 157
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = +3
Query: 186 MVGMGQKDSYVGYEAQSKRGIL 251
MVGMGQKDSYVG EAQSKRGIL
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGIL 22
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 184 bits (449), Expect = 4e-47
Identities = 82/85 (96%), Positives = 85/85 (100%)
Frame = +2
Query: 254 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 433
LKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 54 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 113
Query: 434 FNSPAMYVAIQAVLSLYASGRTTGI 508
FN+PAMYVAIQAVLSLYASGRTTG+
Sbjct: 114 FNTPAMYVAIQAVLSLYASGRTTGV 138
Score = 101 bits (243), Expect = 3e-22
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = +1
Query: 508 LLDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 654
+LDSGDGV+H VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 139 VLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 187
Score = 99.5 bits (237), Expect = 2e-21
Identities = 46/48 (95%), Positives = 47/48 (97%)
Frame = +3
Query: 108 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGYEAQSKRGIL 251
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG EAQSKRGIL
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 52
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 184 bits (449), Expect = 4e-47
Identities = 82/85 (96%), Positives = 85/85 (100%)
Frame = +2
Query: 254 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 433
LKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 434 FNSPAMYVAIQAVLSLYASGRTTGI 508
FN+PAMYVAIQAVLSLYASGRTTG+
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGV 152
Score = 138 bits (334), Expect = 3e-33
Identities = 64/66 (96%), Positives = 65/66 (98%)
Frame = +3
Query: 54 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGYEAQ 233
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 234 SKRGIL 251
SKRGIL
Sbjct: 61 SKRGIL 66
Score = 101 bits (243), Expect = 3e-22
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = +1
Query: 508 LLDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 654
+LDSGDGV+H VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 153 VLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 181 bits (440), Expect = 5e-46
Identities = 80/85 (94%), Positives = 84/85 (98%)
Frame = +2
Query: 254 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 433
LKYPIEHGI+TNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQIMFET
Sbjct: 67 LKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQIMFET 126
Query: 434 FNSPAMYVAIQAVLSLYASGRTTGI 508
FN+PAMYV IQAVLSLYASGRTTGI
Sbjct: 127 FNTPAMYVNIQAVLSLYASGRTTGI 151
Score = 129 bits (311), Expect = 2e-30
Identities = 59/64 (92%), Positives = 63/64 (98%)
Frame = +3
Query: 60 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGYEAQSK 239
++++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG EAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 240 RGIL 251
RGIL
Sbjct: 62 RGIL 65
Score = 96.3 bits (229), Expect = 2e-20
Identities = 42/49 (85%), Positives = 47/49 (95%)
Frame = +1
Query: 508 LLDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 654
+LD+GDGV+H VPIYEGYALPHAI RLDLAGRDLTDY+MKILTERGY+F
Sbjct: 152 VLDTGDGVTHTVPIYEGYALPHAIQRLDLAGRDLTDYMMKILTERGYTF 200
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 140 bits (338), Expect = 1e-33
Identities = 65/66 (98%), Positives = 65/66 (98%)
Frame = +3
Query: 54 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGYEAQ 233
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 234 SKRGIL 251
SKRGIL
Sbjct: 61 SKRGIL 66
Score = 46.8 bits (106), Expect = 1e-05
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +2
Query: 254 LKYPIEHGIITNWDDMEKI 310
LKYPIEHGI+TNWDDMEKI
Sbjct: 68 LKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 140 bits (338), Expect = 1e-33
Identities = 65/66 (98%), Positives = 65/66 (98%)
Frame = +3
Query: 54 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGYEAQ 233
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 234 SKRGIL 251
SKRGIL
Sbjct: 61 SKRGIL 66
Score = 41.1 bits (92), Expect = 7e-04
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 254 LKYPIEHGIITNWDDM 301
LKYPIEHGI+TNWDDM
Sbjct: 68 LKYPIEHGIVTNWDDM 83
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 138 bits (334), Expect = 3e-33
Identities = 64/66 (96%), Positives = 65/66 (98%)
Frame = +3
Query: 54 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGYEAQ 233
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 234 SKRGIL 251
SKRGIL
Sbjct: 61 SKRGIL 66
Score = 46.8 bits (106), Expect = 1e-05
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +2
Query: 254 LKYPIEHGIITNWDDMEKI 310
LKYPIEHGI+TNWDDMEKI
Sbjct: 68 LKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 138 bits (334), Expect = 3e-33
Identities = 64/66 (96%), Positives = 65/66 (98%)
Frame = +3
Query: 54 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGYEAQ 233
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 234 SKRGIL 251
SKRGIL
Sbjct: 61 SKRGIL 66
Score = 46.8 bits (106), Expect = 1e-05
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +2
Query: 254 LKYPIEHGIITNWDDMEKI 310
LKYPIEHGI+TNWDDMEKI
Sbjct: 68 LKYPIEHGIVTNWDDMEKI 86
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 131 bits (317), Expect = 4e-31
Identities = 55/86 (63%), Positives = 72/86 (83%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 LKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 430
++YP+EHGI+ NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+ +I FE
Sbjct: 70 IEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFE 129
Query: 431 TFNSPAMYVAIQAVLSLYASGRTTGI 508
TFN PA+Y+ +QAVLSLYA+GRTTG+
Sbjct: 130 TFNVPALYIQMQAVLSLYATGRTTGV 155
Score = 70.5 bits (165), Expect = 1e-12
Identities = 30/49 (61%), Positives = 39/49 (79%)
Frame = +1
Query: 508 LLDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 654
+LDSGDGV+H VPI +G+A+ HAI R+DLAGRD+T+YL +L GY F
Sbjct: 156 VLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRDVTEYLRVLLRREGYEF 204
Score = 63.7 bits (148), Expect = 1e-10
Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 3/66 (4%)
Frame = +3
Query: 60 DDDVAA---LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGYEA 230
D DV A +V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A
Sbjct: 2 DYDVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKA 61
Query: 231 QSKRGI 248
+S RG+
Sbjct: 62 ESNRGL 67
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 107 bits (257), Expect = 7e-24
Identities = 51/110 (46%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
Frame = +2
Query: 182 RDGRYGPERLLRGXRGPEQERYPHLKYPIEHGIITNWDDMEKIWHHTFYNE-LRVAPEEH 358
R G + L+ G + + + YP+++GI+ NWDDM +W HTF E L + P+E
Sbjct: 46 RVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKEC 105
Query: 359 PVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGI 508
+LLTE PLNP +NREKM Q+MFE + ++YVA+QAVL+LYA G TG+
Sbjct: 106 KLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQAVLTLYAQGLLTGV 155
Score = 73.7 bits (173), Expect = 1e-13
Identities = 30/49 (61%), Positives = 41/49 (83%)
Frame = +1
Query: 508 LLDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 654
++DSGDGV+H P+YEG+AL H RLD+AGRD+T YL+K+L +RGY+F
Sbjct: 156 VVDSGDGVTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQRGYNF 204
Score = 48.0 bits (109), Expect = 6e-06
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Frame = +3
Query: 78 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGYEAQSKRGIL 251
+VVDNG+G K G+AG + P +FPS+VGRP R + + KD VG E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 99.1 bits (236), Expect = 2e-21
Identities = 43/79 (54%), Positives = 55/79 (69%)
Frame = +2
Query: 254 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 433
+KYPI HGI+ +WD ME+ W + LR PE+H LLTE PLN NRE +IMFE+
Sbjct: 81 VKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAEIMFES 140
Query: 434 FNSPAMYVAIQAVLSLYAS 490
FN P +Y+A+QAVL+L AS
Sbjct: 141 FNVPGLYIAVQAVLALTAS 159
Score = 51.2 bits (117), Expect = 6e-07
Identities = 20/54 (37%), Positives = 36/54 (66%)
Frame = +1
Query: 490 RSYHRYLLDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 651
RS ++DSGDGV+H +P+ +GY + I + +AGRD+T ++ +L +R ++
Sbjct: 168 RSLTGLVIDSGDGVTHCIPVADGYVIGSCIKHIPIAGRDITYFIQSLLRDREHT 221
Score = 35.5 bits (78), Expect = 0.033
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 54 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 161
M + A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 83.8 bits (198), Expect = 1e-16
Identities = 38/81 (46%), Positives = 54/81 (66%)
Frame = +2
Query: 266 IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 445
++ G+I +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 446 AMYVAIQAVLSLYASGRTTGI 508
A Y++ VLS +A GRT G+
Sbjct: 154 AYYLSKNVVLSCFAQGRTHGL 174
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/48 (31%), Positives = 32/48 (66%)
Frame = +1
Query: 499 HRYLLDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 642
H ++DSG + VP+++GYA+ HA+++ + G +T+ L ++L ++
Sbjct: 172 HGLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGDLITEQLAQMLDQQ 219
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 63 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 161
D+V+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 36.7 bits (81), Expect = 0.014
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +2
Query: 263 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 436
PIE G + NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 36.7 bits (81), Expect = 0.014
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +2
Query: 263 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 436
PIE G + NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 33.5 bits (73), Expect = 0.13
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +3
Query: 432 PSTPPPCTLPSRPCSRCTPPVVPPVSARLRRWCLPQRTHLRRLRSAPRHPPS 587
P PPP +P P R PP PP++ + P+ R+ PR PPS
Sbjct: 138 PPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPS 189
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 31.5 bits (68), Expect = 0.54
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 85 STMAPACARPVSPATTRPAPSSRP 156
+T AP PATTRPAP+S+P
Sbjct: 317 ATRAPPATTRAPPATTRPAPASQP 340
>U80448-9|AAB37822.2| 577|Caenorhabditis elegans Hypothetical
protein F59A3.8 protein.
Length = 577
Score = 31.1 bits (67), Expect = 0.72
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +3
Query: 435 STPPPCTLPSRPCSRCTPPVVPPVSARLRRWCLPQRTHLRRLRSAPRHPPSGLGWSRLDR 614
+ PP LP+ P V PP +R ++ + +L++ S PR PP G + +
Sbjct: 39 TAPPEKKLPTIPGKLPKRSVEPPEESRDQKPA-GNKPNLKKSPSNPRIPPGGSHPRKKPK 97
Query: 615 LPHEDP 632
+P+ DP
Sbjct: 98 VPNRDP 103
>AL132898-19|CAN99707.1| 258|Caenorhabditis elegans Hypothetical
protein Y59A8B.26 protein.
Length = 258
Score = 30.7 bits (66), Expect = 0.95
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = -2
Query: 502 GGTTGGVQREHGLDGNVHG---GGVEGLKHDLGHLLPVGLGVEGGFGEQHGVLLGGDT 338
GG TGG+ G+ G G G + GL +G L G GG G G+ LGG T
Sbjct: 129 GGATGGLGGLSGILGGATGGATGALGGLTGTVGGLTNALEGATGGLGGLSGI-LGGAT 185
>AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical
protein T08D2.8 protein.
Length = 388
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +1
Query: 76 RL*STMAPACARPVSPATTRPAPSSRPSWVALATRA 183
RL S +AP A P S A TR APS + VA RA
Sbjct: 231 RLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 266
>AL132949-11|CAB70104.2| 927|Caenorhabditis elegans Hypothetical
protein Y53F4B.13 protein.
Length = 927
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +2
Query: 437 NSPAMYVAIQAVLSLYASGRTTGICSTPEMVSPTTYPSTKVTLCPTPSSVWTW 595
N+ ++ V + A S+Y+S + IC + CP PSS+W+W
Sbjct: 821 NAGSIPVELWAEKSIYSSFWDSVICLNKDKKKLMEAMEHTKGKCPIPSSIWSW 873
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -2
Query: 199 PIPTITPWWRGRPTMDGKTARGASSPAKPALHMPEPL 89
P T TP RGRP + ++ P P P+PL
Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372
>Z49069-2|CAA88865.1| 333|Caenorhabditis elegans Hypothetical
protein K12D12.3 protein.
Length = 333
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = -2
Query: 520 RSRADTGGTTGGVQREHGLDGNVHGGGVEGLKHDLGHLLPVGLGVEGG 377
R R D+G + GG G+ H G HD G P G GG
Sbjct: 69 RGRRDSGYSEGGYAASGNTGGSYHPGAAPA--HDFGAQAPAGPAPTGG 114
>Z68113-2|CAA92149.2| 327|Caenorhabditis elegans Hypothetical
protein E03G2.3 protein.
Length = 327
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 487 GVQREHGLDGNVHGGGVEGLKHDLGHLLPVGL-GVEGGFG 371
G + E G+ G G+ G+K D+G L P G+ G +G G
Sbjct: 76 GDRSEDGMSGRDGMQGIPGVKGDMGPLGPTGMKGDKGSMG 115
>Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical
protein B0393.4 protein.
Length = 803
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +3
Query: 432 PSTPPPCTLPSRPCSRCTPPVVPPVSARLRRWCLPQRTHLRRLRS 566
PS PP T P+ P P V PP R+ Q THL +R+
Sbjct: 191 PSEPPLLTTPTTPIEDPEPYVTPPPLQRVP--YKAQLTHLANIRA 233
>U33919-1|AAA96505.1| 327|Caenorhabditis elegans MEC-5 precursor
protein.
Length = 327
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 487 GVQREHGLDGNVHGGGVEGLKHDLGHLLPVGL-GVEGGFG 371
G + E G+ G G+ G+K D+G L P G+ G +G G
Sbjct: 76 GDRSEDGMSGRDGMQGIPGVKGDMGPLGPTGMKGDKGSMG 115
>U33918-1|AAA96504.1| 327|Caenorhabditis elegans MEC-5 protein.
Length = 327
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 487 GVQREHGLDGNVHGGGVEGLKHDLGHLLPVGL-GVEGGFG 371
G + E G+ G G+ G+K D+G L P G+ G +G G
Sbjct: 76 GDRSEDGMSGRDGMQGIPGVKGDMGPLGPTGMKGDKGSMG 115
>AC024754-1|AAK71405.1| 394|Caenorhabditis elegans Hypothetical
protein Y32G9B.1 protein.
Length = 394
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +3
Query: 432 PSTPPPCTLPSRPCSRCTPPVVPPVSARL 518
P TPPP T P+ P P PP A L
Sbjct: 90 PPTPPPSTFPTLPPLTFGTPSTPPPPATL 118
>Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical
protein T23F6.1 protein.
Length = 160
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +3
Query: 432 PSTPPPCTLPSRPCSRCTPP--VVPPVSARLRRWCLPQRTH 548
PS PPPC+ + C +C +VP + + C P T+
Sbjct: 80 PSAPPPCSCGTPGCMQCVQQTVLVPVTTTTCCKCCQPVCTN 120
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +2
Query: 332 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGI 508
EL+V P ++ VLL+ P ++ QI E + + Q L LYA TTG+
Sbjct: 266 ELKVEPWKYKVLLSIPQNIPTVLIGELLQICLEDIKFQSAGITRQPSLILYAYDVTTGV 324
>AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily
assigned gene nameprotein 168 protein.
Length = 1347
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = +3
Query: 486 PPVVPPVSARLRRW-CLPQRTH-LRRLRSAPRHPPSGLGWSRLDRLPHEDPHREG 644
PP P + R +RW L R++ APR P + LDR D REG
Sbjct: 905 PPTAPEPALRRQRWGSLKSRSYDYAGEGRAPRERPHHPNYVSLDRRDDRDRDREG 959
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +3
Query: 432 PSTPPPCTLPSRPCSRCTPPVVPPVSARL---RRWCLPQRTHLRRLRSAPRHPPS 587
P P C P P + C PP PP + L ++ +P+ + + +A PPS
Sbjct: 104 PVPAPCCPPPPAPAAPCCPPPPPPTPSPLVCCKQAPVPENPCCQIVAAAMPPPPS 158
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 27.9 bits (59), Expect = 6.7
Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = -2
Query: 511 ADTGGTTGGVQREHGLDGNVHGGGVEGLKHDLGHLLPVGLGV-EGGFGEQHG 359
A GGT GG G G GGG G + G G G GG+G Q G
Sbjct: 47 ASAGGTGGGRGGGRGGSGGGRGGGSGGGRGGSGGAGAGGSGSGSGGWGGQDG 98
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -3
Query: 249 GYLSCSGPRXPRRSLSGPYRPSRPGGEG 166
GY GP P + GP P PG EG
Sbjct: 387 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 414
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -3
Query: 249 GYLSCSGPRXPRRSLSGPYRPSRPGGEG 166
GY GP P + GP P PG EG
Sbjct: 386 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 413
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -3
Query: 249 GYLSCSGPRXPRRSLSGPYRPSRPGGEG 166
GY GP P + GP P PG EG
Sbjct: 386 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 413
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -3
Query: 249 GYLSCSGPRXPRRSLSGPYRPSRPGGEG 166
GY GP P + GP P PG EG
Sbjct: 387 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 414
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -3
Query: 249 GYLSCSGPRXPRRSLSGPYRPSRPGGEG 166
GY GP P + GP P PG EG
Sbjct: 423 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 450
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 108 KAGFAGDDAPRAVFPSIVGRPRHQG 182
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical
protein F54A3.1 protein.
Length = 425
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +1
Query: 85 STMAPACARPVSPATTRPAPSSRPSWVALATRA 183
S +AP A P S A TR APS + VA RA
Sbjct: 238 SAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 270
>Z81104-3|CAD89749.1| 660|Caenorhabditis elegans Hypothetical
protein M199.5 protein.
Length = 660
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = -2
Query: 505 TGGTTGGVQREHGLDGNVHGGGVEGLKHDLGHLLPVGLGVEGGFGEQ 365
TG GV +G DG G G K D G G+GV+G G Q
Sbjct: 71 TGTGKDGVPGTNGKDGTPGDKGDTGDKGDKGDTGAPGVGVKGDPGAQ 117
>Z68750-1|CAA92963.1| 284|Caenorhabditis elegans Hypothetical
protein K01A6.4 protein.
Length = 284
Score = 27.5 bits (58), Expect = 8.9
Identities = 19/57 (33%), Positives = 22/57 (38%)
Frame = -2
Query: 517 SRADTGGTTGGVQREHGLDGNVHGGGVEGLKHDLGHLLPVGLGVEGGFGEQHGVLLG 347
S+ GG GG + G G GG G G G +GGFG Q G G
Sbjct: 49 SQQGFGGMQGGFGGQSGFGGGSSQGGFGGFGQQGGF----GGNSQGGFGGQQGGFSG 101
>U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical
protein F48C1.8 protein.
Length = 343
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -2
Query: 502 GGTTGGVQREHGLDGNVHGGG 440
GG GG HG G+ HGGG
Sbjct: 190 GGGGGGGHHHHGGGGHYHGGG 210
>AF000196-8|AAL11096.1| 624|Caenorhabditis elegans Hypothetical
protein B0041.2b protein.
Length = 624
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -2
Query: 502 GGTTGGVQREHGLDGNVHGG-GVEGLKHD 419
GG+ GG +HG GN +GG GV D
Sbjct: 145 GGSQGGPHEQHGPGGNQNGGFGVSSSSMD 173
>AF000196-7|AAC24251.2| 706|Caenorhabditis elegans Hypothetical
protein B0041.2a protein.
Length = 706
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -2
Query: 502 GGTTGGVQREHGLDGNVHGG-GVEGLKHD 419
GG+ GG +HG GN +GG GV D
Sbjct: 227 GGSQGGPHEQHGPGGNQNGGFGVSSSSMD 255
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,596,377
Number of Sequences: 27780
Number of extensions: 368496
Number of successful extensions: 2104
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 1640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2090
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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