Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0809.Seq
         (727 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK128451-1|BAC87447.1|  368|Homo sapiens protein ( Homo sapiens ...    31   5.6  
AY101765-1|AAM50084.1| 1885|Homo sapiens C3 and PZP-like alpha-2...    30   7.3  
AB033109-1|BAA86597.1| 1884|Homo sapiens KIAA1283 protein protein.     30   7.3  

>AK128451-1|BAC87447.1|  368|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46594 fis, clone THYMU3045692. ).
          Length = 368

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
 Frame = -1

Query: 625 YIKVHFHIHQLLHP*VMSCYLSFLPNVVHHPQFP-YHFC-D*AI*EYWGSFNHPSNLSFI 452
           Y ++H  IH   HP    C   F+   +H    P  H C   +I  Y  +F HPS  + I
Sbjct: 203 YARMHPSIHSSFHPSTYPCIHPFIYACMHPSIHPSMHACMHPSIHPYMHAFIHPSVNASI 262

Query: 451 YHC 443
           + C
Sbjct: 263 HPC 265


>AY101765-1|AAM50084.1| 1885|Homo sapiens C3 and PZP-like
            alpha-2-macroglobulin domain containing 8 protein.
          Length = 1885

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +2

Query: 302  SFIEFKDFWISWHSGKFQYGLCP 370
            S+ EF+ FWISW  G  Q G  P
Sbjct: 1031 SWDEFRTFWISWRGGLIQVGHGP 1053


>AB033109-1|BAA86597.1| 1884|Homo sapiens KIAA1283 protein protein.
          Length = 1884

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +2

Query: 302  SFIEFKDFWISWHSGKFQYGLCP 370
            S+ EF+ FWISW  G  Q G  P
Sbjct: 1030 SWDEFRTFWISWRGGLIQVGHGP 1052


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,399,900
Number of Sequences: 237096
Number of extensions: 2412106
Number of successful extensions: 3157
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3157
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)