Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0807.Seq
         (740 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    24   1.5  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   2.6  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   3.4  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    23   3.4  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    23   3.4  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    22   4.5  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    22   6.0  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    22   6.0  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +1

Query: 490 LAAHPPSPAGVIAKRPAPIALPNSCA 567
           L+  P  P GV  KR  P AL  +CA
Sbjct: 48  LSKGPCPPQGVDLKRVLPEALQTNCA 73


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 14/40 (35%), Positives = 16/40 (40%)
 Frame = -3

Query: 339 VTNPGLCEEAMIIYLHGFDSNSPGNHEKAYNCSLLTRMYA 220
           V  P LC+      L    S   GNH+  YNC    R  A
Sbjct: 81  VLAPVLCKRQQYCQLM---SKLLGNHQLVYNCHTFGRFLA 117


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 60  RMSQRKPIRSAQYPPKPTPQISGRSSTFSCNILSTS 167
           RM Q+K ++    PP+P   IS   ST + N  S++
Sbjct: 305 RMKQKKRMKEGLIPPEP---ISASLSTSNSNSPSST 337


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 60  RMSQRKPIRSAQYPPKPTPQISGRSSTFSCNILSTS 167
           RM Q+K ++    PP+P   IS   ST + N  S++
Sbjct: 94  RMKQKKRMKEGLIPPEP---ISASLSTSNSNSPSST 126


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 60  RMSQRKPIRSAQYPPKPTPQISGRSSTFSCNILSTS 167
           RM Q+K ++    PP+P   IS   ST + N  S++
Sbjct: 94  RMKQKKRMKEGLIPPEP---ISASLSTSNSNSPSST 126


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 508 SPAGVIAKRPAPIALPNSCA 567
           +P G   KR  P AL N CA
Sbjct: 54  TPEGEELKRDIPEALQNECA 73


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 508 SPAGVIAKRPAPIALPNSCA 567
           +P+G   K+  P AL N CA
Sbjct: 52  TPSGEELKKDIPDALKNECA 71


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -3

Query: 330 PGLCEEAMIIYLHGFDSNSPGNHEKAYNCSL 238
           PG+ E   +I L  +D + PG    A N  L
Sbjct: 190 PGMSENVDVINLMTYDFHIPGGGIAAENSPL 220


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,993
Number of Sequences: 336
Number of extensions: 3843
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)