Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0805.Seq
(702 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 188 4e-48
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 188 4e-48
SB_56| Best HMM Match : Actin (HMM E-Value=0) 188 4e-48
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 188 4e-48
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 188 4e-48
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 132 3e-31
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 129 2e-30
SB_54| Best HMM Match : Actin (HMM E-Value=0) 107 9e-24
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 99 3e-21
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 4e-21
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 61 7e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 58 5e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 56 2e-08
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 55 6e-08
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 36 0.032
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 33 0.30
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.39
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 32 0.39
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 32 0.39
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.39
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 32 0.39
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.39
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.52
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 32 0.52
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.68
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_58292| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 30 1.6
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 30 1.6
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 1.6
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 30 1.6
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 30 1.6
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 30 1.6
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 1.6
SB_48166| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_36120| Best HMM Match : zf-MIZ (HMM E-Value=3.9) 29 4.8
SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0) 29 4.8
SB_20112| Best HMM Match : EGF (HMM E-Value=0) 29 4.8
SB_15607| Best HMM Match : zf-MIZ (HMM E-Value=3.9) 29 4.8
SB_6983| Best HMM Match : rve (HMM E-Value=0.011) 29 4.8
SB_59500| Best HMM Match : RVT_1 (HMM E-Value=0.015) 29 4.8
SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 29 4.8
SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0) 29 4.8
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 28 6.4
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_10665| Best HMM Match : PT (HMM E-Value=6.2) 28 6.4
SB_4319| Best HMM Match : Na_H_Exchanger (HMM E-Value=0.0059) 28 6.4
SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0) 28 6.4
SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) 28 6.4
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 28 6.4
SB_45111| Best HMM Match : rve (HMM E-Value=1.2e-24) 28 8.4
SB_38236| Best HMM Match : YiaAB (HMM E-Value=3.2) 28 8.4
SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) 28 8.4
SB_23472| Best HMM Match : HIT (HMM E-Value=0.43) 28 8.4
SB_18966| Best HMM Match : RVT_1 (HMM E-Value=0.028) 28 8.4
SB_25064| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_20903| Best HMM Match : Extensin_2 (HMM E-Value=0.3) 28 8.4
SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32) 28 8.4
SB_15668| Best HMM Match : Chorion_3 (HMM E-Value=2.5) 28 8.4
SB_12041| Best HMM Match : PHD (HMM E-Value=0.001) 28 8.4
SB_12008| Best HMM Match : RVT_1 (HMM E-Value=0) 28 8.4
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 188 bits (458), Expect = 4e-48
Identities = 85/90 (94%), Positives = 87/90 (96%)
Frame = +3
Query: 240 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 419
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 420 APLNPKANREKMTQIMFETFNTPAMYVAIQ 509
APLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 109 APLNPKANREKMTQIMFETFNSPAMYVAIQ 138
Score = 132 bits (318), Expect = 3e-31
Identities = 61/64 (95%), Positives = 64/64 (100%)
Frame = +2
Query: 509 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 688
AVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERG
Sbjct: 139 AVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERG 198
Query: 689 YSFT 700
YSFT
Sbjct: 199 YSFT 202
Score = 109 bits (263), Expect = 2e-24
Identities = 50/53 (94%), Positives = 52/53 (98%)
Frame = +1
Query: 97 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 255
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 188 bits (458), Expect = 4e-48
Identities = 85/90 (94%), Positives = 87/90 (96%)
Frame = +3
Query: 240 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 419
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 107
Query: 420 APLNPKANREKMTQIMFETFNTPAMYVAIQ 509
APLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 108 APLNPKANREKMTQIMFETFNSPAMYVAIQ 137
Score = 132 bits (320), Expect = 2e-31
Identities = 62/64 (96%), Positives = 64/64 (100%)
Frame = +2
Query: 509 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 688
AVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG
Sbjct: 138 AVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 197
Query: 689 YSFT 700
YSFT
Sbjct: 198 YSFT 201
Score = 107 bits (256), Expect = 1e-23
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +1
Query: 103 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 255
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 52
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 188 bits (458), Expect = 4e-48
Identities = 85/90 (94%), Positives = 87/90 (96%)
Frame = +3
Query: 240 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 419
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 107
Query: 420 APLNPKANREKMTQIMFETFNTPAMYVAIQ 509
APLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 108 APLNPKANREKMTQIMFETFNSPAMYVAIQ 137
Score = 132 bits (320), Expect = 2e-31
Identities = 62/64 (96%), Positives = 64/64 (100%)
Frame = +2
Query: 509 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 688
AVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG
Sbjct: 138 AVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 197
Query: 689 YSFT 700
YSFT
Sbjct: 198 YSFT 201
Score = 108 bits (259), Expect = 5e-24
Identities = 49/51 (96%), Positives = 51/51 (100%)
Frame = +1
Query: 103 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 255
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 52
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 188 bits (458), Expect = 4e-48
Identities = 85/90 (94%), Positives = 87/90 (96%)
Frame = +3
Query: 240 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 419
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 420 APLNPKANREKMTQIMFETFNTPAMYVAIQ 509
APLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 109 APLNPKANREKMTQIMFETFNSPAMYVAIQ 138
Score = 132 bits (320), Expect = 2e-31
Identities = 62/64 (96%), Positives = 64/64 (100%)
Frame = +2
Query: 509 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 688
AVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG
Sbjct: 139 AVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 198
Query: 689 YSFT 700
YSFT
Sbjct: 199 YSFT 202
Score = 114 bits (274), Expect = 7e-26
Identities = 51/53 (96%), Positives = 53/53 (100%)
Frame = +1
Query: 97 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 255
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 188 bits (458), Expect = 4e-48
Identities = 85/90 (94%), Positives = 87/90 (96%)
Frame = +3
Query: 240 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 419
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 420 APLNPKANREKMTQIMFETFNTPAMYVAIQ 509
APLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 109 APLNPKANREKMTQIMFETFNSPAMYVAIQ 138
Score = 109 bits (263), Expect = 2e-24
Identities = 48/53 (90%), Positives = 52/53 (98%)
Frame = +1
Query: 97 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 255
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
Score = 64.1 bits (149), Expect = 1e-10
Identities = 31/35 (88%), Positives = 33/35 (94%), Gaps = 2/35 (5%)
Frame = +2
Query: 509 AVLSLYASGRTTGIVLDSGDGVSHTVPIYE--GYA 607
AVLSLYASGRTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 139 AVLSLYASGRTTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 132 bits (318), Expect = 3e-31
Identities = 61/64 (95%), Positives = 64/64 (100%)
Frame = +2
Query: 509 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 688
AVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERG
Sbjct: 101 AVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERG 160
Query: 689 YSFT 700
YSFT
Sbjct: 161 YSFT 164
Score = 108 bits (259), Expect = 5e-24
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +1
Query: 103 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 255
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 52
Score = 80.2 bits (189), Expect = 1e-15
Identities = 36/43 (83%), Positives = 37/43 (86%)
Frame = +3
Query: 240 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 368
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +3
Query: 441 NREKMTQIMFETFNTPAMYVAIQ 509
N + M +IMFETFN+PAMYVAIQ
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQ 100
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 129 bits (311), Expect = 2e-30
Identities = 59/64 (92%), Positives = 62/64 (96%)
Frame = +2
Query: 509 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 688
AVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLAGRDLTDYLMK++TERG
Sbjct: 17 AVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKLMTERG 76
Query: 689 YSFT 700
YSFT
Sbjct: 77 YSFT 80
Score = 31.9 bits (69), Expect = 0.52
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 462 IMFETFNTPAMYVAIQ 509
IMFE FN+PA+YVAIQ
Sbjct: 1 IMFEAFNSPAVYVAIQ 16
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 107 bits (257), Expect = 9e-24
Identities = 47/63 (74%), Positives = 55/63 (87%)
Frame = +2
Query: 509 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 688
AV++LYASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +++TERG
Sbjct: 2183 AVMALYASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERG 2242
Query: 689 YSF 697
YSF
Sbjct: 2243 YSF 2245
Score = 82.2 bits (194), Expect = 4e-16
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = +3
Query: 348 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 509
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+Q
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQ 2182
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 121 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 222
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 99.1 bits (236), Expect = 3e-21
Identities = 42/63 (66%), Positives = 56/63 (88%)
Frame = +2
Query: 509 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 688
AVLSLYA+GRTTG+VLD+GDGVSH+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G
Sbjct: 164 AVLSLYATGRTTGVVLDAGDGVSHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEG 223
Query: 689 YSF 697
+ F
Sbjct: 224 HCF 226
Score = 63.3 bits (147), Expect = 2e-10
Identities = 24/38 (63%), Positives = 33/38 (86%)
Frame = +3
Query: 396 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 509
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++Q
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQ 163
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 98.7 bits (235), Expect = 4e-21
Identities = 45/98 (45%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Frame = +3
Query: 219 SGRDGRYGTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPE 395
S + G + L VGDEA R +L + YP+++GIV NWDDM+ +W +TF +++ + P
Sbjct: 44 SQKVGDIEVKDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPR 103
Query: 396 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 509
VLLTE PLNP NREKM ++MFE + +Y+AIQ
Sbjct: 104 NTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAIQ 141
Score = 95.1 bits (226), Expect = 5e-20
Identities = 40/63 (63%), Positives = 52/63 (82%)
Frame = +2
Query: 509 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 688
AVL+LYA G TG+V+DSGDGV+H P+YEG+ALPH RLD+AGRD+T YL+K++ RG
Sbjct: 142 AVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGRDITKYLIKLMLLRG 201
Query: 689 YSF 697
Y+F
Sbjct: 202 YAF 204
Score = 44.4 bits (100), Expect = 9e-05
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +1
Query: 115 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 213
+ +V DNG+G K G+AG + P +FPS+VGRP
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRP 39
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 61.3 bits (142), Expect = 7e-10
Identities = 24/65 (36%), Positives = 42/65 (64%)
Frame = +3
Query: 306 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 485
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 486 PAMYV 500
PA ++
Sbjct: 63 PAFFL 67
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/58 (39%), Positives = 38/58 (65%)
Frame = +2
Query: 509 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 682
+VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T ++ E
Sbjct: 71 SVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQCRQMFEE 128
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1
Query: 106 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 222
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 58.4 bits (135), Expect = 5e-09
Identities = 23/48 (47%), Positives = 35/48 (72%)
Frame = +2
Query: 542 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 685
TG V+DSGDGV+H +P+ EGY + I + +AGRD+T ++ ++L ER
Sbjct: 62 TGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITFFVQQLLRER 109
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 56.4 bits (130), Expect = 2e-08
Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = +2
Query: 515 LSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL-TERGY 691
LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L +RG+
Sbjct: 770 LSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQRGH 829
Query: 692 SFT 700
+FT
Sbjct: 830 NFT 832
Score = 51.2 bits (117), Expect = 8e-07
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +1
Query: 91 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 237
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 54.8 bits (126), Expect = 6e-08
Identities = 29/66 (43%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +3
Query: 222 GRDGRYGTEGL--YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 395
GR + G E L ++GDEA K T K+PI H IV +WD ME+ W + LR PE
Sbjct: 273 GRSAK-GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPE 330
Query: 396 EHPVLL 413
+H LL
Sbjct: 331 DHYFLL 336
Score = 32.3 bits (70), Expect = 0.39
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 542 TGIVLDSGDGVSHTVPI 592
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -1
Query: 219 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 103
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +3
Query: 222 GRDGRYGTEGLYVGDEAQSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-- 392
GR G + GL VG++ S I L+ P + +VT+++ E++ H F + P
Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGG 164
Query: 393 EEHPVLLTEAPLNPKANRE 449
HPV++TE NP R+
Sbjct: 165 VNHPVIMTEPVCNPNYCRQ 183
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 35.9 bits (79), Expect = 0.032
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +3
Query: 252 LYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNE 377
L++GD+ + + L Y P + G + NWD ++IW +TF E
Sbjct: 272 LFIGDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 109 EVAALVVDNGSGMCKAGFAGDDAPRAV 189
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 32.7 bits (71), Expect = 0.30
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -1
Query: 285 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 142
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 213 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 32.3 bits (70), Expect = 0.39
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -1
Query: 285 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 142
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 408 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 32.3 bits (70), Expect = 0.39
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -1
Query: 285 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 142
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 271 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 32.3 bits (70), Expect = 0.39
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -1
Query: 285 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 142
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 249 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 32.3 bits (70), Expect = 0.39
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -1
Query: 285 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 142
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 32.3 bits (70), Expect = 0.39
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -1
Query: 285 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 142
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 32.3 bits (70), Expect = 0.39
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -1
Query: 285 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 142
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 125 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 31.9 bits (69), Expect = 0.52
Identities = 17/65 (26%), Positives = 25/65 (38%)
Frame = +3
Query: 420 APLNPKANREKMTQIMFETFNTPAMYVAIQPCSRCTRPVVPPVSCWTPATVSPTPCPSTK 599
A P A + + +NTP ++ P P +PP + TP+ P P PS
Sbjct: 888 ASYQPSAPSSMPAPVPLQPYNTPMPPISSTPYQ--APPTLPPTTLTTPSWSQPVPVPSMY 945
Query: 600 DTHSP 614
P
Sbjct: 946 QPQPP 950
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 31.9 bits (69), Expect = 0.52
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -1
Query: 285 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 142
L C ++ ++LSH + H M D +HG RS SCET L T
Sbjct: 173 LTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 194 GNTARGASSPAKPALHIPEPLSTT 123
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 194 GNTARGASSPAKPALHIPEPLSTT 123
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 31.1 bits (67), Expect = 0.90
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Frame = +3
Query: 522 CTRPVVPPVSCWTPATVSPTPC-----PSTKDTHSP 614
CT+ +P +TP T TPC PST+ +H+P
Sbjct: 859 CTKRYIPSAKRYTPCTERYTPCTKRYTPSTEPSHAP 894
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +3
Query: 456 TQIMFETFNTPAMYVAIQPCSRCTRPVVPPVSCWTPATVSPTPCPS--TKDTHSPTP 620
+Q+ E +N P+ + + CT +P +TP T TP T T TP
Sbjct: 611 SQVNSERYNAPSQSPCTERYTPCTERYIPCTERYTPCTERYTPSTERYTPSTERYTP 667
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 31.1 bits (67), Expect = 0.90
Identities = 21/74 (28%), Positives = 26/74 (35%)
Frame = +3
Query: 402 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQPCSRCTRPVVPPVSCWTPATVSPT 581
P T P P T +T TP P P P + TP T +PT
Sbjct: 29 PTPTTHTPTKPSPTTPTSTAPT-QTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPT 87
Query: 582 PCPSTKDTHSPTPS 623
TK T + TP+
Sbjct: 88 TSTLTKPTPATTPT 101
>SB_58292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 30.7 bits (66), Expect = 1.2
Identities = 26/85 (30%), Positives = 34/85 (40%), Gaps = 5/85 (5%)
Frame = +3
Query: 402 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQPCSRCTRPVV---PPVSCWTPATV 572
P L+T PL +T NTP + P T P+V PP+ TP V
Sbjct: 34 PSLVTTTPLLVTTTPSLVTTTPLLVTNTPPLDTTTLPLVTITPPLVITAPPLVTTTPPLV 93
Query: 573 SPTP--CPSTKDTHSPTPSCVWT*P 641
+ TP +T + TP V T P
Sbjct: 94 TTTPLLVTTTPFLVTTTPPLVTTTP 118
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 510 PCSRCTRPVVPPVSCWTPATVSPTP-CPSTKDTHSPTPS 623
P +R P+ PP C + V PTP S+K + SP+PS
Sbjct: 325 PTTRTFSPISPPAGC-AASPVPPTPPAISSKRSFSPSPS 362
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -1
Query: 285 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 142
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 242 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 288
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 194 GNTARGASSPAKPALHIPEPLSTT 123
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 30.3 bits (65), Expect = 1.6
Identities = 27/93 (29%), Positives = 32/93 (34%), Gaps = 5/93 (5%)
Frame = +3
Query: 360 HTFYNELRVAP--EEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQPCSRCTRP 533
HT N AP HP L P+A +T M + P S T P
Sbjct: 276 HTISNPAMAAPWVTPHPATLPVTLFTPQA--APVTPPMGAQLPETEQPQMVAPSSTVTPP 333
Query: 534 VV---PPVSCWTPATVSPTPCPSTKDTHSPTPS 623
V PP S P PTP + +P PS
Sbjct: 334 VTEPAPPSSVVAPPPAVPTPATAPPPVVAPPPS 366
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -1
Query: 285 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 142
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -1
Query: 285 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 142
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 1641 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -1
Query: 285 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 142
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 669 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 715
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -1
Query: 285 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 142
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 224 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 270
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -1
Query: 285 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 142
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 1079 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1125
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -1
Query: 285 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 142
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 22 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 68
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -1
Query: 285 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 142
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_48166| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
Frame = +3
Query: 447 EKMTQIMFETFNTPAMYVAIQPCSR----CTRPVVPP-VSCWTPATVSPTPC 587
+K T + F TP++ P S T P VPP V+ P T +P PC
Sbjct: 188 DKQTDVCHLIFPTPSLGTQAPPPSTGGVTLTTPTVPPRVASTEPTTFTPKPC 239
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 29.9 bits (64), Expect = 2.1
Identities = 23/58 (39%), Positives = 26/58 (44%)
Frame = +1
Query: 526 RVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDPHRARLLVH 699
R RS R R+ RRR RR R+P H S SRSR R P R+R H
Sbjct: 221 RSRSRSRSRSPRRRRRSRSPRRRRRSRSPSPHHRSHRSRSR-SRSPRRRHSRSRSPTH 277
>SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1584
Score = 29.5 bits (63), Expect = 2.8
Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 11/77 (14%)
Frame = +3
Query: 414 TEAPLNPKANR---EKMTQIMFETFNTPAMYVAIQPCSRCTRPVVPPVSCWTPATV---- 572
TEA +PKAN+ +K + + + A PC+ P PPV PA +
Sbjct: 1336 TEAGKHPKANKVGKDKHNKGTKKCYGACAPPPMADPCATMAAPCAPPVMMAAPAPMLAPM 1395
Query: 573 ---SPTPC-PSTKDTHS 611
P PC P THS
Sbjct: 1396 LAPMPAPCAPPECHTHS 1412
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +3
Query: 510 PCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 623
P + TRP VP +T PTP P T P P+
Sbjct: 927 PPIQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIPA 964
>SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1065
Score = 29.1 bits (62), Expect = 3.6
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +3
Query: 381 RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQPCSRCTRPVVPPVSCWT 560
++A + +P + E N K + +K+ Q M +T + + R + W
Sbjct: 866 KIASKHNPEMTEEMRANLKEHLDKINQRMNDTMTL------LYNMPKIMRKFAFELPNWA 919
Query: 561 PATVSPTPCPSTKDTHSP-TPSCV 629
P PT P+ K T +P TPS V
Sbjct: 920 PKIPLPTEPPTEKMTEAPTTPSAV 943
>SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 650
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
Frame = +3
Query: 483 TPAMYVAIQPCSRCTRPVVPPV-SCWTPATVS-PTPCPS---TKDTHSPTPS 623
TP+ Y QP T P PP S + P S P PS T ++ PTPS
Sbjct: 189 TPSSYPPTQPSYPPTAPSYPPTPSSYPPIAASYPPTAPSYNPTAPSYPPTPS 240
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 522 CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 623
C+RP PPV+ T +T S T +T T + TP+
Sbjct: 620 CSRPTTPPVTT-TKSTTSSTTKGTTASTTTSTPT 652
>SB_36120| Best HMM Match : zf-MIZ (HMM E-Value=3.9)
Length = 209
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -1
Query: 285 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 115
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 93 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 151
Query: 114 NFFVAHLE 91
V L+
Sbjct: 152 QVDVLLLD 159
>SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 522
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -1
Query: 285 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 115
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 93 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 151
Query: 114 NFFVAHLE 91
V L+
Sbjct: 152 QVDVLLLD 159
>SB_20112| Best HMM Match : EGF (HMM E-Value=0)
Length = 2112
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +3
Query: 393 EEHPVLLTEAPLNPKANREKMTQIMF-ETFNTPAMYVAIQPCSRCTRPVVPPVSCWTPAT 569
EEH ++ T N ++ + MF E +TP + S + P P+S TP+
Sbjct: 2034 EEHVMMETTLHHNNQSMCVPVESGMFREKHHTPPSAHSYGTSSYDSSPQKLPISYLTPSP 2093
Query: 570 VSPTPCPSTKDTHSPTPSC 626
SP S+ +HS +C
Sbjct: 2094 ESPKDWSSSPSSHSDWSNC 2112
>SB_15607| Best HMM Match : zf-MIZ (HMM E-Value=3.9)
Length = 221
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -1
Query: 285 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 115
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 126 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 184
Query: 114 NFFVAHLE 91
V L+
Sbjct: 185 QVDVLLLD 192
>SB_6983| Best HMM Match : rve (HMM E-Value=0.011)
Length = 251
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +3
Query: 525 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 629
T VVPP+ P V P+P + + SPTPSC+
Sbjct: 207 TPAVVPPI----PTLVVPSPL-TQPEVESPTPSCI 236
>SB_59500| Best HMM Match : RVT_1 (HMM E-Value=0.015)
Length = 224
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -1
Query: 285 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 115
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 43 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 101
Query: 114 NFFVAHLE 91
V L+
Sbjct: 102 QVDVLLLD 109
>SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1676
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -1
Query: 285 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 115
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 715 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 773
Query: 114 NFFVAHLE 91
V L+
Sbjct: 774 QVDVLLLD 781
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/51 (33%), Positives = 20/51 (39%)
Frame = +3
Query: 474 TFNTPAMYVAIQPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSC 626
T NT + A C R T VPPVS +P PC P +C
Sbjct: 629 TDNTRTRFKAFGECGRTT---VPPVSTSSPTPTPQDPCTGFNCDTPPYSTC 676
>SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1176
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -1
Query: 285 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 115
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 799 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 857
Query: 114 NFFVAHLE 91
V L+
Sbjct: 858 QVDVLLLD 865
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +3
Query: 522 CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*P 641
CT P ++ P T + T P TK P PS + T P
Sbjct: 150 CTGTPEPTITSKPPVTETTTTKPETKPPKPPAPSTIPTPP 189
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 194 GNTARGASSPAKPALHIPEPLSTT 123
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 194 GNTARGASSPAKPALHIPEPLSTT 123
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_10665| Best HMM Match : PT (HMM E-Value=6.2)
Length = 215
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +1
Query: 577 PHRAHLRRIRTPPR-HPASGLSRSRPHRLPHEDPH 678
PHR H+ RTP R H + PH P +PH
Sbjct: 161 PHRPHMDPTRTPHRPHMDPTRTSHGPHTDPTRNPH 195
>SB_4319| Best HMM Match : Na_H_Exchanger (HMM E-Value=0.0059)
Length = 410
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -3
Query: 514 HGWMATYMAGVLNVSNMIWVIFSLLALGLRGASVS 410
+GW A + + ++W+ F L GL GA VS
Sbjct: 347 YGWGKQGKAPIAQATALLWMFFEPLLFGLVGAEVS 381
>SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 885
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = -1
Query: 267 HLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 151
H++ + ++SH +HH ++ + +HG R + SCE+ L
Sbjct: 470 HIITKNIVSHLEHHDILY-----KFQHGFRKLRSCESQL 503
>SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)
Length = 665
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +3
Query: 414 TEAP---LNPKANREKMTQIMFETFNTPAMYVAIQPCSRCTRPVVPPVSCWTPATVSPTP 584
T+AP L PK T + ET + PA+ +A + + V P + TV+P
Sbjct: 515 TDAPATTLAPKTTIAPETTVAQETTDAPAITMAPETSAAPETTVAPETNAAPETTVAPEI 574
Query: 585 CPSTKDTHSP 614
+T+ T +P
Sbjct: 575 TAATEITAAP 584
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/50 (28%), Positives = 19/50 (38%)
Frame = +3
Query: 474 TFNTPAMYVAIQPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 623
T T A P + T P P + TP T + TP +P P+
Sbjct: 123 TAPTTAATTPTTPTTAPTTPTTPTTAATTPTTAATTPAAGAAAAAAPPPA 172
>SB_45111| Best HMM Match : rve (HMM E-Value=1.2e-24)
Length = 1575
Score = 27.9 bits (59), Expect = 8.4
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = -3
Query: 610 ECVSFVDGHGVGDTVAGVQHDTGGTTGRVQREHGWMATYMAGVLNVSNMIWVIFSLLALG 431
+CVSF D +T GVQ GG G V+R+ +VS+ V++ L
Sbjct: 69 DCVSFEDPFTGVETPLGVQQGGGGGGGGVKRKR--------DPEDVSDKDDVVYELRQTS 120
Query: 430 LRGASVSRTGCS 395
+ ++ RT CS
Sbjct: 121 TKRSTKMRTNCS 132
>SB_38236| Best HMM Match : YiaAB (HMM E-Value=3.2)
Length = 177
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -3
Query: 514 HGWMATYMAGVLNVSNMIWVIFSLLALGLRGASVS 410
HGW A V ++W F L GL GA V+
Sbjct: 44 HGWGDDEKAAVSRAMAVLWEFFQPLLFGLIGAEVT 78
>SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)
Length = 439
Score = 27.9 bits (59), Expect = 8.4
Identities = 21/73 (28%), Positives = 27/73 (36%)
Frame = +3
Query: 402 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQPCSRCTRPVVPPVSCWTPATVSPT 581
PVL A P A + TQ + P ++ + P PPV P TV P
Sbjct: 22 PVLTEAATTQPPAPPPEPTQAPVADTDPPTNPPSVVEVTTTQAPPPPPVVTEAPTTV-PP 80
Query: 582 PCPSTKDTHSPTP 620
P + T P P
Sbjct: 81 PVVTDAPTTVPPP 93
>SB_23472| Best HMM Match : HIT (HMM E-Value=0.43)
Length = 168
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 267 HLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 142
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 44 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 80
>SB_18966| Best HMM Match : RVT_1 (HMM E-Value=0.028)
Length = 252
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 267 HLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 142
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 89 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 125
>SB_25064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1134
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 267 HLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 142
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 673 HIIFHDIMNHIDTHNILV-----KFQHGFRRFFSCETQLITT 709
>SB_20903| Best HMM Match : Extensin_2 (HMM E-Value=0.3)
Length = 713
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +3
Query: 507 QPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 620
+PC T P PP + W+P + P P D PTP
Sbjct: 235 EPCFTKTEPPAPPSNYWSP-PMQPMQQP---DQEQPTP 268
>SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32)
Length = 698
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 267 HLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 142
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 292 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 328
>SB_15668| Best HMM Match : Chorion_3 (HMM E-Value=2.5)
Length = 276
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +3
Query: 507 QPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 620
+PC T P PP + W+P + P P D PTP
Sbjct: 169 EPCFTKTEPPAPPSNYWSP-PMQPMQQP---DQEQPTP 202
>SB_12041| Best HMM Match : PHD (HMM E-Value=0.001)
Length = 560
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 267 HLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 142
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 503 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 539
>SB_12008| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 979
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 267 HLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 142
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 129 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 165
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,375,965
Number of Sequences: 59808
Number of extensions: 597713
Number of successful extensions: 2345
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 1887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2311
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1841633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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