Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0802X.Seq
         (510 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U61151-1|AAB41306.1|   45|Tribolium castaneum TATH1 protein.           22   2.8  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   2.8  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   3.7  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   3.7  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   6.4  

>U61151-1|AAB41306.1|   45|Tribolium castaneum TATH1 protein.
          Length = 45

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -2

Query: 191 RVFPLSSTFT*ALSIFPNISNERYNSSFET 102
           R+  L+  F     + P++ N+R  S FET
Sbjct: 9   RMNSLNDAFDRLRDVVPSLGNDRKLSKFET 38


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -3

Query: 283 RDDVKKKHFSCSYELQIRHLVCV 215
           R+D+++ +F  S+ L I  +VC+
Sbjct: 312 RNDLERLYFYWSFALLITRIVCL 334


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -1

Query: 69  IVWXKPYSQGSTVPQFSIQFTFC 1
           IV+   ++QG T P F++ + +C
Sbjct: 140 IVFILFFAQGLTSPIFNLVYVYC 162


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = +3

Query: 354 KKHPEFTKARELGPRFSELNSFEHEYGTRWKQLHE 458
           K+ P+    RE  P F++  +   +YG+ W   H+
Sbjct: 207 KERPDSIYQREYSPTFTQQQTQYSQYGS-WFLPHQ 240


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -2

Query: 326 EFIRFFKAFNNDW 288
           E+  F+K+  NDW
Sbjct: 297 EYGEFYKSLTNDW 309


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,733
Number of Sequences: 336
Number of extensions: 2064
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12154132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)