Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0802X.Seq
(510 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0614 - 22753092-22753349,22754059-22754277,22754712-227549... 46 2e-05
09_01_0079 - 1159963-1160211,1160303-1160509,1160631-1160801,116... 42 4e-04
04_04_0435 - 25170348-25170593,25170989-25171189,25171580-251717... 41 5e-04
10_01_0298 - 3094197-3094307,3095093-3095253,3095462-3095666,309... 41 7e-04
08_02_0162 + 13464698-13464974,13465719-13465837,13465920-134665... 40 9e-04
07_01_0911 - 7664498-7664704,7664790-7664858,7666441-7666569 40 0.002
11_01_0002 + 3386-3541,3619-3717,4114-4182,4275-4459,4662-4677 39 0.002
12_01_0001 + 1777-1935,2002-2109,2492-2560,2652-2836,3040-3055 38 0.004
02_05_1015 + 33512023-33512359,33513550-33514082 38 0.006
02_05_1014 + 33510108-33510471,33510857-33511362 37 0.008
03_02_0555 + 9431451-9431688,9432685-9432803,9432886-9433079,943... 35 0.033
07_03_0305 - 16475127-16476017,16476058-16478067 32 0.31
04_04_1627 - 34867557-34870095,34870159-34870391,34871274-34871276 32 0.31
02_02_0387 - 9606744-9607475 30 0.94
03_06_0337 + 33224333-33224479,33224603-33224663,33224740-332247... 29 1.6
02_05_1206 + 34941293-34941562,34942052-34942153,34942249-349425... 29 1.6
11_01_0189 - 1493618-1493637,1493728-1493795,1494070-1494207,149... 29 2.2
12_01_0190 - 1404374-1404402,1404491-1404558,1404830-1404967,140... 29 2.9
02_01_0422 - 3084940-3087072 29 2.9
09_02_0211 - 5817564-5817578,5817711-5818040,5818095-5818196,581... 28 3.8
06_03_0500 + 21470681-21470952,21471049-21471089,21472322-214724... 28 3.8
03_06_0507 + 34404843-34404968,34405091-34405151,34405260-344052... 28 3.8
02_01_0409 - 2978104-2978642,2979106-2979931,2980112-2982178 28 3.8
02_01_0429 - 3132848-3135043 28 5.0
02_01_0425 - 3102629-3104692,3106505-3108546,3109918-3109989,311... 28 5.0
11_04_0467 + 18039458-18039638,18040136-18040227,18040336-180404... 27 6.6
11_04_0441 + 17781533-17781775,17782007-17782114,17782386-177824... 27 6.6
07_01_0101 - 752935-753223,753311-753408,753674-753764,753844-75... 27 6.6
04_04_0869 - 28883688-28884983 27 6.6
02_02_0658 + 12720873-12720906,12721201-12721664,12723069-127232... 27 6.6
02_02_0419 - 10009686-10012568 27 6.6
01_07_0160 - 41563109-41563468,41563566-41563985,41564082-415642... 27 6.6
11_04_0439 + 17749634-17749858,17750164-17750301,17750770-177509... 27 8.8
04_04_1197 + 31672019-31672325,31672431-31672740,31673334-316783... 27 8.8
02_04_0201 - 20869057-20869361,20869506-20869922,20870184-20870544 27 8.8
>06_03_0614 -
22753092-22753349,22754059-22754277,22754712-22754960,
22755186-22755275,22755379-22755456,22755562-22756337,
22757042-22757384
Length = 670
Score = 45.6 bits (103), Expect = 2e-05
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Frame = +1
Query: 1 AKRELDGKLRNSRTLRVRFXPXNSAVR--------VKNLPPFVSNELLYRSFEIFGKIER 156
A L+ + N + +RV F + +R +KNL P + N+ LY F FG I
Sbjct: 118 AMENLNFTVVNGKPIRVMFSNRDPTLRKSGLANVFIKNLEPNIDNKSLYEMFSSFGTILS 177
Query: 157 AYVKVDERGKTLGEGVVEFARKPSALSAI 243
+ V D GK+ G G ++F + SA AI
Sbjct: 178 SKVATDFNGKSKGYGFIQFESESSAKDAI 206
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
+KNL +++E L + FE FG++ V +D G++ G G V FA A +AI
Sbjct: 347 LKNLDDDINDEHLRKLFECFGEVASCKVMLDSHGRSKGCGFVSFATVEDANNAI 400
>09_01_0079 -
1159963-1160211,1160303-1160509,1160631-1160801,
1161732-1161869,1162184-1162273,1162354-1162431,
1162510-1163166,1163245-1163363,1164305-1164584
Length = 662
Score = 41.5 bits (93), Expect = 4e-04
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
+KNL + N+ LY +F +FG I V D G++ G G V++ R +A +AI
Sbjct: 132 IKNLDKSIDNKALYDTFCVFGNILSCKVATDASGESKGYGFVQYERDEAAQAAI 185
Score = 29.9 bits (64), Expect = 1.2
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +1
Query: 1 AKRELDGKLRNSRTLRVRFXPX-NSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDE 177
++RE++ K + + L+ N+ + +KNL V ++ L F +G I V D
Sbjct: 298 SEREMELKEKFEKNLQEAADKYQNTNLYLKNLDDSVDDDKLRELFAEYGTITSCKVMRDS 357
Query: 178 RGKTLGEGVVEFARKPSALSAI 243
G + G G V F A A+
Sbjct: 358 NGVSRGSGFVAFKSAEDASRAL 379
>04_04_0435 -
25170348-25170593,25170989-25171189,25171580-25171756,
25172284-25172418,25173131-25173262,25173292-25173369,
25173452-25174108,25174210-25174328,25175897-25176173
Length = 673
Score = 41.1 bits (92), Expect = 5e-04
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAIRNCTKN 261
+KNL + ++ L+ +F FG I V DE G++ G G V++ + +A SAI++
Sbjct: 131 IKNLDKAIDHKTLHDTFSAFGNILSCKVATDEMGQSKGFGFVQYDKGEAAQSAIKSLNGM 190
Query: 262 VSS*HHPYAQSLLKALKNLMNSMDILK--RIFPRNI 363
+ + Y L+ + NS+D K +F +N+
Sbjct: 191 LINDKPVYVGPFLRK-QERENSVDKTKFNNVFVKNL 225
Score = 32.3 bits (70), Expect = 0.23
Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +1
Query: 1 AKRELDGKLRNSRTLRVRFXPXNSA-VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDE 177
++RE++ K R ++++ + +KNL + ++ L F +GKI + D
Sbjct: 297 SEREIELKRRFEQSMKDAADKYQGLNLYMKNLDDSIGDDQLCELFSNYGKITSCKIMRDA 356
Query: 178 RGKTLGEGVVEFARKPSALSAI 243
G + G G V F+ + A A+
Sbjct: 357 NGVSKGSGFVAFSTREEASQAL 378
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
V VKNL + E L + F +G I A + V GK+ G + F A A+
Sbjct: 220 VFVKNLSESTTKEDLVKIFGAYGNITSAVIMVGMDGKSRCFGFINFKSPDDAARAV 275
>10_01_0298 -
3094197-3094307,3095093-3095253,3095462-3095666,
3096349-3096534,3096616-3096756,3096843-3096959,
3097046-3097456
Length = 443
Score = 40.7 bits (91), Expect = 7e-04
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAIRNCT 255
+ VKNLP S E + FEI G++ + + + G G V FA + SAL A++
Sbjct: 289 IYVKNLPENASKEKIKEIFEIHGEVTKVVLPPAKAGNKRDFGFVHFAERSSALKAVKGSE 348
Query: 256 K 258
K
Sbjct: 349 K 349
>08_02_0162 +
13464698-13464974,13465719-13465837,13465920-13466579,
13466686-13466763,13466849-13466938,13467241-13467378,
13467730-13467738
Length = 456
Score = 40.3 bits (90), Expect = 9e-04
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
+KNL + N+ LY +F +FG I V + G++ G G V+F + +A +AI
Sbjct: 131 IKNLDKSIDNKALYDTFSVFGNILSCKVATEMSGESKGYGFVQFELEEAAQNAI 184
Score = 27.5 bits (58), Expect = 6.6
Identities = 30/114 (26%), Positives = 43/114 (37%)
Frame = +1
Query: 25 LRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGV 204
+R V P + V VKNL + + L F FG I V + GK+ G
Sbjct: 203 VRKQERENVSGNPKFNNVYVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGKSRCFGF 262
Query: 205 VEFARKPSALSAIRNCTKNVSS*HHPYAQSLLKALKNLMNSMDILKRIFPRNIQ 366
V F A A+ + Y + +A K M+ LK F +NI+
Sbjct: 263 VNFENPDDAARAVEDLNGKKFDDKEWY---VCRAQKKSEREME-LKEKFEKNIK 312
>07_01_0911 - 7664498-7664704,7664790-7664858,7666441-7666569
Length = 134
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/57 (36%), Positives = 32/57 (56%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAIR 246
+ + NL P V+ + + F G+++R V D+ GK+ G V FARK AL AI+
Sbjct: 28 LHISNLDPGVTVDDVQELFSEIGELKRYSVNYDKDGKSQGTAEVVFARKVDALEAIK 84
>11_01_0002 + 3386-3541,3619-3717,4114-4182,4275-4459,4662-4677
Length = 174
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/57 (33%), Positives = 32/57 (56%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAIR 246
+ + NL VSNE + F G ++R + D+ G++ G V F+RK AL+A++
Sbjct: 70 LHISNLDYAVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEVVFSRKSDALAAVK 126
>12_01_0001 + 1777-1935,2002-2109,2492-2560,2652-2836,3040-3055
Length = 178
Score = 38.3 bits (85), Expect = 0.004
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAIR 246
+ NL VSNE + F G ++R + D G++ G V F+RK AL+A++
Sbjct: 76 ISNLDYAVSNEDIKELFSEVGDVKRYSINYDRSGRSKGTAEVVFSRKSDALAAVK 130
>02_05_1015 + 33512023-33512359,33513550-33514082
Length = 289
Score = 37.5 bits (83), Expect = 0.006
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 70 SAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDER-GKTLGEGVVEFARKPSALSAI 243
++VRV NL L F FG + R YV VD++ G + G G V F + A AI
Sbjct: 208 NSVRVTNLSEDTREPDLLELFRTFGPVSRVYVAVDQKTGASRGFGFVNFVHREDAEKAI 266
>02_05_1014 + 33510108-33510471,33510857-33511362
Length = 289
Score = 37.1 bits (82), Expect = 0.008
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 37 RTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDER-GKTLGEGVVEF 213
R +R ++VRV NL E L F FG + RAYV +D R G++ G G + F
Sbjct: 197 RESEMRRRNDENSVRVTNLSEDTREEDLRELFGSFGPLTRAYVALDHRTGESRGFGFLSF 256
Query: 214 ARKPSALSAI 243
+ A AI
Sbjct: 257 VYREDAERAI 266
>03_02_0555 +
9431451-9431688,9432685-9432803,9432886-9433079,
9433174-9433430,9433544-9433650,9433715-9433888,
9434359-9434490,9434776-9434955,9435062-9435265
Length = 534
Score = 35.1 bits (77), Expect = 0.033
Identities = 21/60 (35%), Positives = 30/60 (50%)
Frame = +1
Query: 70 SAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAIRN 249
S V +KN+ V ++ L F FG I A + DE+G + G G V + A A+RN
Sbjct: 307 SNVYIKNINDEVGDDALRERFNEFGNITSAKIMRDEKGISKGFGFVCYNTPEEAKCAMRN 366
>07_03_0305 - 16475127-16476017,16476058-16478067
Length = 966
Score = 31.9 bits (69), Expect = 0.31
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +1
Query: 274 HHPYAQSLLKALKNLMNSMDILKRIFPRNIQNLRKLVSLD 393
H P S+L ALKNL S + L + P NI L+ + SLD
Sbjct: 788 HIPEDISMLTALKNLNLSWNHLSGVIPTNIGALQSIESLD 827
>04_04_1627 - 34867557-34870095,34870159-34870391,34871274-34871276
Length = 924
Score = 31.9 bits (69), Expect = 0.31
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDE-RGKTLGEGVVEFARKPSALSAI 243
V +LP +V+NE L F G+I +A V V+ G + G G V+FA SA A+
Sbjct: 704 VSHLPSYVNNERLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVAL 758
Score = 29.5 bits (63), Expect = 1.6
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 70 SAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVD-ERGKTLGEGVVEFARKPSALSAI 243
S + V N+P + + L F FGKI A V D + G G ++F SA AI
Sbjct: 417 SNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAI 475
Score = 28.7 bits (61), Expect = 2.9
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +1
Query: 67 NSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDE--RGKTLGEGVVEFARKPSALSA 240
N+ + V NLP V + L F FG+I R+ V VD+ G + G G V+++ A A
Sbjct: 208 NTNLYVGNLPASVGSHKLIELFLPFGQIVRSRV-VDDCFTGLSQGYGFVKYSDPRCASEA 266
Query: 241 IR 246
I+
Sbjct: 267 IK 268
>02_02_0387 - 9606744-9607475
Length = 243
Score = 30.3 bits (65), Expect = 0.94
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +1
Query: 88 NLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAIRNC 252
+L P V L + GK+ +A V D+RG++ G G V A + A+ C
Sbjct: 144 DLSPQVDRLRLREMYSEHGKVVQARVVYDKRGRSRGFGFVTMATQEGFYRALGRC 198
>03_06_0337 +
33224333-33224479,33224603-33224663,33224740-33224776,
33225237-33225367,33225447-33225590,33225686-33225776,
33225973-33226106,33226234-33226373,33227328-33227426,
33227520-33227602,33227690-33227744,33227826-33227937,
33228274-33228766,33228881-33229094,33229203-33229273,
33229733-33229901,33229991-33230120,33230556-33230968,
33231059-33231262
Length = 975
Score = 29.5 bits (63), Expect = 1.6
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGK-TLGEGVVEFARKPSALSAI 243
+ NLP +SNE + F FGK+E + + + K G G ++F+ +A +A+
Sbjct: 542 ISNLPFDLSNEEVTERFSAFGKVESFFPVLHKLTKRPRGTGFLKFSTPEAADAAV 596
>02_05_1206 +
34941293-34941562,34942052-34942153,34942249-34942521,
34942863-34942913
Length = 231
Score = 29.5 bits (63), Expect = 1.6
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 12/84 (14%)
Frame = +1
Query: 7 RELDGKLRNSRTLRVRF-----------XPXNSAVRVKNLPPFVSNELLYRSFEIFGKIE 153
+ LDG L + RT+RV F + V NL V++E+L F+ G +
Sbjct: 119 KNLDGSLYSGRTMRVNFADKPKPKLPLYPETEHKLFVGNLSWTVTSEMLTEMFQKCGNVV 178
Query: 154 RAYVKVD-ERGKTLGEGVVEFARK 222
A V D E G++ G G V ++ K
Sbjct: 179 GARVLYDGETGRSRGYGFVCYSTK 202
>11_01_0189 -
1493618-1493637,1493728-1493795,1494070-1494207,
1494647-1494698,1494803-1494902,1495606-1495681,
1495757-1495844,1496248-1496342,1496506-1496605,
1496765-1496879,1497077-1497241,1497362-1497547
Length = 400
Score = 29.1 bits (62), Expect = 2.2
Identities = 17/53 (32%), Positives = 22/53 (41%)
Frame = +3
Query: 252 HEKCFFLTSSLRPVIVESFEEPDEFDGYPEKNLPKKHPEFTKARELGPRFSEL 410
H+ C S V V FEEPD + Y L H + KA E P ++
Sbjct: 134 HKHCLAFVSGKNQVTVHDFEEPDNKESY---ILTSDHQKDVKAVEWRPNSGKM 183
>12_01_0190 -
1404374-1404402,1404491-1404558,1404830-1404967,
1405414-1405465,1405570-1405669,1406938-1407088,
1407212-1407311,1407471-1407585,1407786-1407950,
1408050-1408105,1408199-1408256
Length = 343
Score = 28.7 bits (61), Expect = 2.9
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = +3
Query: 252 HEKCFFLTSSLRPVIVESFEEPDEFDGYPEKNLPKKHPEFTKARELGP 395
H+ C S V V FEEPD + Y L H + KA E P
Sbjct: 110 HKHCLAFVSGKNQVTVHDFEEPDNKESY---ILTSDHQKDVKAVEWRP 154
>02_01_0422 - 3084940-3087072
Length = 710
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 298 LKALKNLMNSMDILKRIFPRNIQNLRKLVSLD 393
LKAL +L S + L R P++I NL+ L+ LD
Sbjct: 568 LKALVSLNLSFNNLNREIPQSISNLKNLMVLD 599
>09_02_0211 -
5817564-5817578,5817711-5818040,5818095-5818196,
5818616-5818915
Length = 248
Score = 28.3 bits (60), Expect = 3.8
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDE-RGKTLGEGVVEFARKPSALSAIRN 249
V N+P V+N+ L F G +ERA V D+ G++ G V + A +AI +
Sbjct: 74 VGNIPRTVTNDELAAMFADHGTVERAEVMFDKYTGRSRRFGFVTMSTPEEANAAIES 130
>06_03_0500 +
21470681-21470952,21471049-21471089,21472322-21472485,
21472577-21472679,21472806-21472975,21473766-21474239
Length = 407
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +1
Query: 61 PXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDE-RGKTLGEGVVEF 213
P + V +PP ++ + L F +GK+ + +D G++ G G V F
Sbjct: 177 PKTRKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHGTGRSRGFGFVTF 228
>03_06_0507 +
34404843-34404968,34405091-34405151,34405260-34405296,
34405365-34405386,34405861-34405957,34406037-34406180,
34407034-34407173,34408205-34408255,34408347-34408429,
34408515-34408590,34408646-34408760,34409080-34409575,
34409682-34409895,34410000-34410070,34410527-34410695,
34410787-34410916,34411330-34411742,34411839-34412039
Length = 881
Score = 28.3 bits (60), Expect = 3.8
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 88 NLPPFVSNELLYRSFEIFGKIERAYVKVDERGK-TLGEGVVEFARKPSALSAI 243
NLP +SNE + F FGK+E + + + K G G ++F+ +A +A+
Sbjct: 451 NLPFDLSNEEVTERFSAFGKVESFFPVLHKLTKRPRGTGFLKFSTAEAADAAV 503
>02_01_0409 - 2978104-2978642,2979106-2979931,2980112-2982178
Length = 1143
Score = 28.3 bits (60), Expect = 3.8
Identities = 22/59 (37%), Positives = 28/59 (47%)
Frame = +1
Query: 217 RKPSALSAIRNCTKNVSS*HHPYAQSLLKALKNLMNSMDILKRIFPRNIQNLRKLVSLD 393
RK SA + N N + P LKAL L S + L P++I NLR L+ LD
Sbjct: 552 RKASAFPKVLNLGNNEFTGLIPQEIGQLKALLLLNLSFNKLYGDIPQSICNLRDLLMLD 610
>02_01_0429 - 3132848-3135043
Length = 731
Score = 27.9 bits (59), Expect = 5.0
Identities = 24/71 (33%), Positives = 35/71 (49%)
Frame = +1
Query: 247 NCTKNVSS*HHPYAQSLLKALKNLMNSMDILKRIFPRNIQNLRKLVSLDHVSQS*IVSNM 426
N KN + P S LKAL L S + P+ I NL KLV LD +S + + +
Sbjct: 561 NIAKNGFTGAIPPEISQLKALDMLNLSFNSFSGETPQAICNLTKLVMLD-LSNNNLTGTI 619
Query: 427 NMELDGSNCMN 459
+EL+ N ++
Sbjct: 620 PLELNKLNFLS 630
>02_01_0425 - 3102629-3104692,3106505-3108546,3109918-3109989,
3110157-3111444
Length = 1821
Score = 27.9 bits (59), Expect = 5.0
Identities = 24/71 (33%), Positives = 35/71 (49%)
Frame = +1
Query: 247 NCTKNVSS*HHPYAQSLLKALKNLMNSMDILKRIFPRNIQNLRKLVSLDHVSQS*IVSNM 426
N KN + P S LKAL L S + P+ I NL KLV LD +S + + +
Sbjct: 984 NIAKNGFTGAIPPEISQLKALDMLNLSFNSFSGETPQAICNLTKLVMLD-LSNNNLTGTI 1042
Query: 427 NMELDGSNCMN 459
+EL+ N ++
Sbjct: 1043 PLELNKLNFLS 1053
>11_04_0467 + 18039458-18039638,18040136-18040227,18040336-18040452,
18041228-18041313,18041385-18041643,18041761-18041957,
18042181-18042213,18043371-18043862,18044236-18044299,
18045478-18045618,18045726-18045803,18047077-18047166,
18047260-18047352,18047430-18047489,18047567-18047635,
18047737-18047823,18048337-18048379,18048517-18048587,
18049050-18049143,18050335-18050447,18050909-18050998,
18051075-18051155,18052211-18052291,18052369-18052464,
18052543-18052599,18052693-18052737,18052807-18052872,
18052961-18052999
Length = 1004
Score = 27.5 bits (58), Expect = 6.6
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -1
Query: 414 YLTLRNVVQAHELS*ILDVSWEDSFQDI 331
YL ++ ++ E+S D +WEDSF+ +
Sbjct: 929 YLVIQGIMDYWEMSQRSDSTWEDSFEQV 956
>11_04_0441 +
17781533-17781775,17782007-17782114,17782386-17782471,
17782546-17782807,17782921-17783120,17783770-17784012,
17784118-17784394,17784625-17784759,17784880-17784960,
17785311-17785406,17785661-17785756,17785834-17785890,
17785967-17786035,17786154-17786240,17786534-17786635,
17786730-17786819,17786900-17786980,17787573-17787653,
17787761-17787856,17787937-17787993,17788093-17788137,
17788218-17788346
Length = 906
Score = 27.5 bits (58), Expect = 6.6
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -1
Query: 429 IHVRNYLTLRNVVQAHELS*ILDVSWEDSF 340
IH+ Y +R V+ E+ + D +W+D+F
Sbjct: 818 IHLPKYYVIRGVMDYREMLHMKDSTWDDAF 847
>07_01_0101 -
752935-753223,753311-753408,753674-753764,753844-753882,
754019-754110,754535-754634,754742-754828,754949-755250,
756036-756242,756319-756405,756978-757058,757257-757365,
758037-758093,758188-758258,758414-758521,758874-758974,
759111-759177,759434-759535,759618-759662,759916-760511,
761956-762065,762165-762280
Length = 984
Score = 27.5 bits (58), Expect = 6.6
Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 5/41 (12%)
Frame = +1
Query: 274 HHPYAQSLLKALKNLMNSMDIL-----KRIFPRNIQNLRKL 381
++PY QS+L+A KN+M + + + IF +I+ L+K+
Sbjct: 743 YYPYYQSVLEAAKNIMLDLKYVNNAEDRAIFLTDIEKLKKI 783
>04_04_0869 - 28883688-28884983
Length = 431
Score = 27.5 bits (58), Expect = 6.6
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 264 FFLTSSLRPVIVESFEEPDEFDGYPEKNLPKKHPEFTK 377
F L +SL V S D DGYPE +L + TK
Sbjct: 10 FLLAASLAVAAVSSHNITDILDGYPEYSLYNSYLSQTK 47
>02_02_0658 +
12720873-12720906,12721201-12721664,12723069-12723227,
12723308-12723424,12723570-12723721,12724594-12724685,
12724787-12725464,12725551-12725803,12725804-12725888,
12725969-12726037,12726489-12726668,12726989-12726994,
12727526-12727624
Length = 795
Score = 27.5 bits (58), Expect = 6.6
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +1
Query: 88 NLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAIRNCTKN 261
NL P VSNE L + F FG++ ++ E +EF +A SA+R+ K+
Sbjct: 236 NLEPAVSNEELLQIFGAFGEVR----EIRETPHKRHHRFIEFYDVRAAESALRSLNKS 289
>02_02_0419 - 10009686-10012568
Length = 960
Score = 27.5 bits (58), Expect = 6.6
Identities = 18/38 (47%), Positives = 20/38 (52%)
Frame = +1
Query: 280 PYAQSLLKALKNLMNSMDILKRIFPRNIQNLRKLVSLD 393
P S L L NL SM+ L PR I L+KL SLD
Sbjct: 771 PDELSSLTGLVNLNLSMNRLTGTIPRKIGALQKLESLD 808
>01_07_0160 -
41563109-41563468,41563566-41563985,41564082-41564263,
41564362-41564542,41565066-41565084,41565185-41565445,
41566140-41566253,41566264-41566331,41566890-41567018,
41567141-41567245,41567317-41567456,41567519-41567687,
41567824-41567900,41568133-41568187,41568660-41568705,
41568806-41568894,41568996-41569061,41569360-41569425,
41569817-41569906,41570009-41570026
Length = 884
Score = 27.5 bits (58), Expect = 6.6
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 67 NSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVD-ERGKTLGEGVVEFA 216
N + V LP + E L F FG+I AY+ D +R G G V FA
Sbjct: 238 NKKIFVGRLPQEANTEDLRHYFGKFGRIVDAYIPKDPKRSGHRGFGFVTFA 288
>11_04_0439 + 17749634-17749858,17750164-17750301,17750770-17750943,
17751099-17751184,17751264-17751525,17751616-17751815,
17753631-17754086,17754198-17754474,17754694-17754828,
17754946-17755026,17756305-17756400,17756676-17756771,
17756844-17756900,17756975-17757043,17757158-17757237,
17758185-17758329,17758422-17758511,17758914-17758994,
17759103-17759198,17759279-17759335,17759417-17759461,
17759547-17759612,17760304-17760350,17762771-17762865,
17763375-17763393,17763438-17763498,17763637-17763660
Length = 1085
Score = 27.1 bits (57), Expect = 8.8
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -1
Query: 429 IHVRNYLTLRNVVQAHELS*ILDVSWEDSF 340
IH+ Y +R ++ E+ + D +W+D+F
Sbjct: 936 IHLPKYYVIRGIMDYREMLNMKDSTWDDAF 965
>04_04_1197 + 31672019-31672325,31672431-31672740,31673334-31678335,
31678677-31678715
Length = 1885
Score = 27.1 bits (57), Expect = 8.8
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +1
Query: 166 KVDERGKTLGEGVVEFARKPSALSAIRNCTKN--VSS*HHPYAQSLLKALKNLMNSMDIL 339
KVD G T E +V +R P +S + + N S+ SL K N ++S+ L
Sbjct: 1329 KVDFAGFTSLEELV-ISRCPKLVSFLAHNDGNDEQSNGRWLLPLSLGKLEINYVDSLKTL 1387
Query: 340 KRIFPRNIQNLRKLVSLDHVS 402
+ FP N+ L+KLV L + S
Sbjct: 1388 QLCFPGNLTRLKKLVVLGNQS 1408
>02_04_0201 - 20869057-20869361,20869506-20869922,20870184-20870544
Length = 360
Score = 27.1 bits (57), Expect = 8.8
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +1
Query: 232 LSAIRNCTKNVSS*HHPYAQSLLKALKNLMNSMDILKRIFPRNIQNLRKLVSL 390
LS + C +S H P L LK L ++L P N++NL KL L
Sbjct: 176 LSLLDLCHNQLSE-HIPQELGYLVNLKGLRLCDNMLSSSIPNNLENLTKLTVL 227
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,368,322
Number of Sequences: 37544
Number of extensions: 197970
Number of successful extensions: 543
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1095026320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -