Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0802X.Seq
(510 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457272-1|CAG33553.1| 357|Homo sapiens PSPC1 protein. 94 3e-19
BC014184-1|AAH14184.2| 393|Homo sapiens PSPC1 protein protein. 94 3e-19
AL354808-5|CAI41005.1| 248|Homo sapiens paraspeckle component 1... 94 3e-19
AL354808-4|CAI41004.1| 523|Homo sapiens paraspeckle component 1... 94 3e-19
AK001817-1|BAA91924.1| 357|Homo sapiens protein ( Homo sapiens ... 94 3e-19
AF449627-1|AAL59602.1| 393|Homo sapiens paraspeckle protein 1 b... 94 3e-19
AF448795-1|AAL59601.1| 523|Homo sapiens paraspeckle protein 1 a... 94 3e-19
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 93 5e-19
X16850-1|CAA34747.1| 396|Homo sapiens myoblast antigen 24.1D5 p... 93 5e-19
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 93 5e-19
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 93 5e-19
BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein. 93 5e-19
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 93 5e-19
L14599-1|AAC37578.1| 471|Homo sapiens protein ( Human mRNA, com... 89 8e-18
Y11289-1|CAA72157.1| 471|Homo sapiens p54nrb protein. 89 1e-17
U89867-1|AAC51852.1| 471|Homo sapiens nuclear matrix protein 55... 89 1e-17
U02493-1|AAA03427.1| 471|Homo sapiens 54 kDa protein protein. 89 1e-17
CR456761-1|CAG33042.1| 471|Homo sapiens NONO protein. 89 1e-17
BC069639-1|AAH69639.1| 471|Homo sapiens non-POU domain containi... 89 1e-17
BC069616-1|AAH69616.1| 471|Homo sapiens non-POU domain containi... 89 1e-17
BC028299-1|AAH28299.1| 471|Homo sapiens non-POU domain containi... 89 1e-17
BC012141-1|AAH12141.1| 471|Homo sapiens NONO protein protein. 89 1e-17
BC003129-1|AAH03129.1| 471|Homo sapiens NONO protein protein. 89 1e-17
BC002364-1|AAH02364.1| 471|Homo sapiens non-POU domain containi... 89 1e-17
AL834505-1|CAD39162.1| 202|Homo sapiens hypothetical protein pr... 70 4e-12
BC037428-1|AAH37428.1| 606|Homo sapiens RAVER1 protein protein. 43 5e-04
AB075858-1|BAB85564.1| 384|Homo sapiens KIAA1978 protein protein. 43 5e-04
BC022543-1|AAH22543.1| 217|Homo sapiens zinc finger CCHC-type a... 40 0.007
BC010177-1|AAH10177.1| 140|Homo sapiens ZCRB1 protein protein. 40 0.007
BC005099-1|AAH05099.1| 141|Homo sapiens Unknown (protein for IM... 40 0.007
AB062361-1|BAB56132.1| 217|Homo sapiens ZCRB1 protein protein. 40 0.007
BC041956-1|AAH41956.1| 243|Homo sapiens LOC645974 protein protein. 39 0.009
AL662864-2|CAI40931.1| 200|Homo sapiens novel protein similar t... 39 0.009
AL662864-1|CAI40930.1| 200|Homo sapiens novel protein similar t... 39 0.009
BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein... 37 0.047
AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein... 37 0.047
AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein... 37 0.047
AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein pr... 37 0.047
AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein... 37 0.047
Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding pro... 36 0.062
Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for ... 36 0.062
U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein p... 36 0.062
BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein... 36 0.062
BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein... 36 0.062
BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein. 36 0.062
AL109839-2|CAI95632.1| 330|Homo sapiens chromosome 20 open read... 36 0.062
AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open read... 36 0.062
AL008725-5|CAI95663.1| 330|Homo sapiens chromosome 20 open read... 36 0.062
AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open read... 36 0.062
AY547318-1|AAS55633.1| 236|Homo sapiens unknown protein. 36 0.11
AL136305-1|CAC36889.1| 236|Homo sapiens protein ( Human DNA seq... 36 0.11
AK095016-1|BAC04474.1| 211|Homo sapiens protein ( Homo sapiens ... 36 0.11
BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein. 35 0.14
CR457134-1|CAG33415.1| 320|Homo sapiens EIF3S4 protein. 35 0.19
BT006889-1|AAP35535.1| 320|Homo sapiens eukaryotic translation ... 35 0.19
BC008469-1|AAH08469.1| 320|Homo sapiens eukaryotic translation ... 35 0.19
BC000733-1|AAH00733.1| 320|Homo sapiens eukaryotic translation ... 35 0.19
AF094850-1|AAG15419.1| 320|Homo sapiens eukaryotic translation ... 35 0.19
AF092453-1|AAG15396.1| 320|Homo sapiens eukaryotic translation ... 35 0.19
AF020833-1|AAB71866.1| 320|Homo sapiens eukaryotic translation ... 35 0.19
U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding pro... 34 0.25
U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding... 34 0.25
DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein. 34 0.25
BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein. 34 0.25
BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein. 34 0.25
BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein... 34 0.25
BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein... 34 0.25
AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein... 34 0.25
AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein... 34 0.25
AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein... 34 0.25
AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein... 34 0.25
AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein... 34 0.25
AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein... 34 0.25
AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein... 34 0.25
AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific poly(A)... 34 0.25
U96074-1|AAC78728.1| 320|Homo sapiens translation initiation fa... 33 0.77
BC132973-1|AAI32974.1| 1023|Homo sapiens peroxisome proliferator... 33 0.77
BC132971-1|AAI32972.1| 1023|Homo sapiens peroxisome proliferator... 33 0.77
BC026956-1|AAH26956.1| 741|Homo sapiens PPARGC1B protein protein. 33 0.77
AY188950-1|AAO40025.1| 996|Homo sapiens peroxisome proliferator... 33 0.77
AY188949-1|AAO40024.1| 1002|Homo sapiens peroxisome proliferator... 33 0.77
AY188948-1|AAO40023.1| 1017|Homo sapiens peroxisome proliferator... 33 0.77
AY188947-1|AAO40022.1| 1023|Homo sapiens peroxisome proliferator... 33 0.77
AK095391-1|BAC04541.1| 1023|Homo sapiens protein ( Homo sapiens ... 33 0.77
AF468497-1|AAL78634.1| 984|Homo sapiens PGC-1-related estrogen ... 33 0.77
AF468496-1|AAL78633.1| 1023|Homo sapiens PGC-1-related estrogen ... 33 0.77
AB046799-1|BAB13405.1| 704|Homo sapiens KIAA1579 protein protein. 33 0.77
D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding pro... 32 1.0
BC118568-1|AAI18569.1| 252|Homo sapiens PABPC4 protein protein. 32 1.0
BC106908-1|AAI06909.1| 281|Homo sapiens PABPC4 protein protein. 32 1.0
AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protei... 32 1.0
AK222917-1|BAD96637.1| 371|Homo sapiens PABPC4 protein variant ... 32 1.0
Z95327-4|CAI42681.1| 225|Homo sapiens cleavage stimulation fact... 31 1.8
BC028239-1|AAH28239.1| 616|Homo sapiens cleavage stimulation fa... 31 3.1
AY130299-1|AAN05429.1| 616|Homo sapiens tCstF-64 protein. 31 3.1
Z95327-3|CAI42680.1| 577|Homo sapiens cleavage stimulation fact... 30 4.1
Z83819-6|CAB06072.2| 577|Homo sapiens cleavage stimulation fact... 30 4.1
U78525-1|AAC99479.1| 814|Homo sapiens eukaryotic translation in... 30 4.1
U62583-1|AAB42010.1| 873|Homo sapiens Prt1 homolog protein. 30 4.1
M85085-1|AAA35724.1| 577|Homo sapiens cleavage stimulation fact... 30 4.1
DQ351905-1|ABC73063.1| 595|Homo sapiens heterogeneous nuclear r... 30 4.1
BX640912-1|CAE45953.1| 613|Homo sapiens hypothetical protein pr... 30 4.1
BT009778-1|AAP88780.1| 577|Homo sapiens cleavage stimulation fa... 30 4.1
BC110865-1|AAI10866.1| 814|Homo sapiens eukaryotic translation ... 30 4.1
BC110389-1|AAI10390.1| 607|Homo sapiens HNRPR protein protein. 30 4.1
BC033135-1|AAH33135.1| 559|Homo sapiens Similar to cleavage sti... 30 4.1
BC017712-1|AAH17712.1| 577|Homo sapiens cleavage stimulation fa... 30 4.1
BC009986-1|AAH09986.1| 622|Homo sapiens Unknown (protein for IM... 30 4.1
BC001449-1|AAH01449.1| 636|Homo sapiens HNRPR protein protein. 30 4.1
BC001173-1|AAH01173.1| 814|Homo sapiens EIF3S9 protein protein. 30 4.1
AL109936-4|CAI19027.1| 636|Homo sapiens heterogeneous nuclear r... 30 4.1
AL109936-3|CAI19026.1| 633|Homo sapiens heterogeneous nuclear r... 30 4.1
AF000364-1|AAC39540.1| 633|Homo sapiens heterogeneous nuclear r... 30 4.1
AC004971-1|AAP21880.1| 385|Homo sapiens unknown protein. 30 4.1
M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein. 29 9.4
BC006516-1|AAH06516.3| 482|Homo sapiens NCL protein protein. 29 9.4
BC006494-1|AAH06494.3| 482|Homo sapiens NCL protein protein. 29 9.4
BC002343-1|AAH02343.3| 482|Homo sapiens NCL protein protein. 29 9.4
AK127608-1|BAC87055.1| 603|Homo sapiens protein ( Homo sapiens ... 29 9.4
AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens ... 29 9.4
AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein. 29 9.4
>CR457272-1|CAG33553.1| 357|Homo sapiens PSPC1 protein.
Length = 357
Score = 93.9 bits (223), Expect = 3e-19
Identities = 45/84 (53%), Positives = 57/84 (67%)
Frame = +1
Query: 1 AKRELDGKLRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDER 180
AK ELDG + SR LR+RF +A+ VKNL P VSNELL ++F FG +E+A V VD+R
Sbjct: 97 AKAELDGTILKSRPLRIRFATHGAALTVKNLSPVVSNELLEQAFSQFGPVEKAVVVVDDR 156
Query: 181 GKTLGEGVVEFARKPSALSAIRNC 252
G+ G+G VEFA KP A A+ C
Sbjct: 157 GRATGKGFVEFAAKPPARKALERC 180
Score = 70.1 bits (164), Expect = 4e-12
Identities = 34/69 (49%), Positives = 47/69 (68%)
Frame = +3
Query: 264 FFLTSSLRPVIVESFEEPDEFDGYPEKNLPKKHPEFTKARELGPRFSELNSFEHEYGTRW 443
F LT++ RPVIVE E+ D+ DG PEK L +K ++ K RE PRF++ +FE EY +RW
Sbjct: 185 FLLTTTPRPVIVEPMEQFDDEDGLPEK-LMQKTQQYHKEREQPPRFAQPGTFEFEYASRW 243
Query: 444 KQLHELHRQ 470
K L E+ +Q
Sbjct: 244 KALDEMEKQ 252
>BC014184-1|AAH14184.2| 393|Homo sapiens PSPC1 protein protein.
Length = 393
Score = 93.9 bits (223), Expect = 3e-19
Identities = 45/84 (53%), Positives = 57/84 (67%)
Frame = +1
Query: 1 AKRELDGKLRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDER 180
AK ELDG + SR LR+RF +A+ VKNL P VSNELL ++F FG +E+A V VD+R
Sbjct: 133 AKAELDGTILKSRPLRIRFATHGAALTVKNLSPVVSNELLEQAFSQFGPVEKAVVVVDDR 192
Query: 181 GKTLGEGVVEFARKPSALSAIRNC 252
G+ G+G VEFA KP A A+ C
Sbjct: 193 GRATGKGFVEFAAKPPARKALERC 216
Score = 70.1 bits (164), Expect = 4e-12
Identities = 34/69 (49%), Positives = 47/69 (68%)
Frame = +3
Query: 264 FFLTSSLRPVIVESFEEPDEFDGYPEKNLPKKHPEFTKARELGPRFSELNSFEHEYGTRW 443
F LT++ RPVIVE E+ D+ DG PEK L +K ++ K RE PRF++ +FE EY +RW
Sbjct: 221 FLLTTTPRPVIVEPMEQFDDEDGLPEK-LMQKTQQYHKEREQPPRFAQPGTFEFEYASRW 279
Query: 444 KQLHELHRQ 470
K L E+ +Q
Sbjct: 280 KALDEMEKQ 288
>AL354808-5|CAI41005.1| 248|Homo sapiens paraspeckle component 1
protein.
Length = 248
Score = 93.9 bits (223), Expect = 3e-19
Identities = 45/84 (53%), Positives = 57/84 (67%)
Frame = +1
Query: 1 AKRELDGKLRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDER 180
AK ELDG + SR LR+RF +A+ VKNL P VSNELL ++F FG +E+A V VD+R
Sbjct: 133 AKAELDGTILKSRPLRIRFATHGAALTVKNLSPVVSNELLEQAFSQFGPVEKAVVVVDDR 192
Query: 181 GKTLGEGVVEFARKPSALSAIRNC 252
G+ G+G VEFA KP A A+ C
Sbjct: 193 GRATGKGFVEFAAKPPARKALERC 216
Score = 35.5 bits (78), Expect = 0.11
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +3
Query: 264 FFLTSSLRPVIVESFEEPDEFDGYPEK 344
F LT++ RPVIVE E+ D+ DG PEK
Sbjct: 221 FLLTTTPRPVIVEPMEQFDDEDGLPEK 247
>AL354808-4|CAI41004.1| 523|Homo sapiens paraspeckle component 1
protein.
Length = 523
Score = 93.9 bits (223), Expect = 3e-19
Identities = 45/84 (53%), Positives = 57/84 (67%)
Frame = +1
Query: 1 AKRELDGKLRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDER 180
AK ELDG + SR LR+RF +A+ VKNL P VSNELL ++F FG +E+A V VD+R
Sbjct: 133 AKAELDGTILKSRPLRIRFATHGAALTVKNLSPVVSNELLEQAFSQFGPVEKAVVVVDDR 192
Query: 181 GKTLGEGVVEFARKPSALSAIRNC 252
G+ G+G VEFA KP A A+ C
Sbjct: 193 GRATGKGFVEFAAKPPARKALERC 216
Score = 70.1 bits (164), Expect = 4e-12
Identities = 34/69 (49%), Positives = 47/69 (68%)
Frame = +3
Query: 264 FFLTSSLRPVIVESFEEPDEFDGYPEKNLPKKHPEFTKARELGPRFSELNSFEHEYGTRW 443
F LT++ RPVIVE E+ D+ DG PEK L +K ++ K RE PRF++ +FE EY +RW
Sbjct: 221 FLLTTTPRPVIVEPMEQFDDEDGLPEK-LMQKTQQYHKEREQPPRFAQPGTFEFEYASRW 279
Query: 444 KQLHELHRQ 470
K L E+ +Q
Sbjct: 280 KALDEMEKQ 288
>AK001817-1|BAA91924.1| 357|Homo sapiens protein ( Homo sapiens
cDNA FLJ10955 fis, clone PLACE1000406, moderately
similar to PTB-ASSOCIATED SPLICING FACTOR. ).
Length = 357
Score = 93.9 bits (223), Expect = 3e-19
Identities = 45/84 (53%), Positives = 57/84 (67%)
Frame = +1
Query: 1 AKRELDGKLRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDER 180
AK ELDG + SR LR+RF +A+ VKNL P VSNELL ++F FG +E+A V VD+R
Sbjct: 97 AKAELDGTILKSRPLRIRFATHGAALTVKNLSPVVSNELLEQAFSQFGPVEKAVVVVDDR 156
Query: 181 GKTLGEGVVEFARKPSALSAIRNC 252
G+ G+G VEFA KP A A+ C
Sbjct: 157 GRATGKGFVEFAAKPPARKALERC 180
Score = 70.1 bits (164), Expect = 4e-12
Identities = 34/69 (49%), Positives = 47/69 (68%)
Frame = +3
Query: 264 FFLTSSLRPVIVESFEEPDEFDGYPEKNLPKKHPEFTKARELGPRFSELNSFEHEYGTRW 443
F LT++ RPVIVE E+ D+ DG PEK L +K ++ K RE PRF++ +FE EY +RW
Sbjct: 185 FLLTTTPRPVIVEPMEQFDDEDGLPEK-LMQKTQQYHKEREQPPRFAQPGTFEFEYASRW 243
Query: 444 KQLHELHRQ 470
K L E+ +Q
Sbjct: 244 KALDEMEKQ 252
>AF449627-1|AAL59602.1| 393|Homo sapiens paraspeckle protein 1 beta
isoform protein.
Length = 393
Score = 93.9 bits (223), Expect = 3e-19
Identities = 45/84 (53%), Positives = 57/84 (67%)
Frame = +1
Query: 1 AKRELDGKLRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDER 180
AK ELDG + SR LR+RF +A+ VKNL P VSNELL ++F FG +E+A V VD+R
Sbjct: 133 AKAELDGTILKSRPLRIRFATHGAALTVKNLSPVVSNELLEQAFSQFGPVEKAVVVVDDR 192
Query: 181 GKTLGEGVVEFARKPSALSAIRNC 252
G+ G+G VEFA KP A A+ C
Sbjct: 193 GRATGKGFVEFAAKPPARKALERC 216
Score = 70.1 bits (164), Expect = 4e-12
Identities = 34/69 (49%), Positives = 47/69 (68%)
Frame = +3
Query: 264 FFLTSSLRPVIVESFEEPDEFDGYPEKNLPKKHPEFTKARELGPRFSELNSFEHEYGTRW 443
F LT++ RPVIVE E+ D+ DG PEK L +K ++ K RE PRF++ +FE EY +RW
Sbjct: 221 FLLTTTPRPVIVEPMEQFDDEDGLPEK-LMQKTQQYHKEREQPPRFAQPGTFEFEYASRW 279
Query: 444 KQLHELHRQ 470
K L E+ +Q
Sbjct: 280 KALDEMEKQ 288
>AF448795-1|AAL59601.1| 523|Homo sapiens paraspeckle protein 1
alpha isoform protein.
Length = 523
Score = 93.9 bits (223), Expect = 3e-19
Identities = 45/84 (53%), Positives = 57/84 (67%)
Frame = +1
Query: 1 AKRELDGKLRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDER 180
AK ELDG + SR LR+RF +A+ VKNL P VSNELL ++F FG +E+A V VD+R
Sbjct: 133 AKAELDGTILKSRPLRIRFATHGAALTVKNLSPVVSNELLEQAFSQFGPVEKAVVVVDDR 192
Query: 181 GKTLGEGVVEFARKPSALSAIRNC 252
G+ G+G VEFA KP A A+ C
Sbjct: 193 GRATGKGFVEFAAKPPARKALERC 216
Score = 70.1 bits (164), Expect = 4e-12
Identities = 34/69 (49%), Positives = 47/69 (68%)
Frame = +3
Query: 264 FFLTSSLRPVIVESFEEPDEFDGYPEKNLPKKHPEFTKARELGPRFSELNSFEHEYGTRW 443
F LT++ RPVIVE E+ D+ DG PEK L +K ++ K RE PRF++ +FE EY +RW
Sbjct: 221 FLLTTTPRPVIVEPMEQFDDEDGLPEK-LMQKTQQYHKEREQPPRFAQPGTFEFEYASRW 279
Query: 444 KQLHELHRQ 470
K L E+ +Q
Sbjct: 280 KALDEMEKQ 288
>X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing
factor protein.
Length = 707
Score = 93.1 bits (221), Expect = 5e-19
Identities = 46/88 (52%), Positives = 59/88 (67%)
Frame = +1
Query: 1 AKRELDGKLRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDER 180
AK ELD R LRVRF +A+ V+NL P+VSNELL +F FG IERA V VD+R
Sbjct: 348 AKAELDDTPMRGRQLRVRFATHAAALSVRNLSPYVSNELLEEAFSQFGPIERAVVIVDDR 407
Query: 181 GKTLGEGVVEFARKPSALSAIRNCTKNV 264
G++ G+G+VEFA KP+A A C++ V
Sbjct: 408 GRSTGKGIVEFASKPAARKAFERCSEGV 435
Score = 76.2 bits (179), Expect = 6e-14
Identities = 36/72 (50%), Positives = 49/72 (68%)
Frame = +3
Query: 255 EKCFFLTSSLRPVIVESFEEPDEFDGYPEKNLPKKHPEFTKARELGPRFSELNSFEHEYG 434
E F LT++ RPVIVE E+ D+ DG PEK L +K+P + K RE PRF++ +FE+EY
Sbjct: 433 EGVFLLTTTPRPVIVEPLEQLDDEDGLPEK-LAQKNPMYQKERETPPRFAQHGTFEYEYS 491
Query: 435 TRWKQLHELHRQ 470
RWK L E+ +Q
Sbjct: 492 QRWKSLDEMEKQ 503
>X16850-1|CAA34747.1| 396|Homo sapiens myoblast antigen 24.1D5
protein.
Length = 396
Score = 93.1 bits (221), Expect = 5e-19
Identities = 46/88 (52%), Positives = 59/88 (67%)
Frame = +1
Query: 1 AKRELDGKLRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDER 180
AK ELD R LRVRF +A+ V+NL P+VSNELL +F FG IERA V VD+R
Sbjct: 37 AKAELDDTPMRGRQLRVRFATHAAALSVRNLSPYVSNELLEEAFSQFGPIERAVVIVDDR 96
Query: 181 GKTLGEGVVEFARKPSALSAIRNCTKNV 264
G++ G+G+VEFA KP+A A C++ V
Sbjct: 97 GRSTGKGIVEFASKPAARKAFERCSEGV 124
Score = 76.2 bits (179), Expect = 6e-14
Identities = 36/72 (50%), Positives = 49/72 (68%)
Frame = +3
Query: 255 EKCFFLTSSLRPVIVESFEEPDEFDGYPEKNLPKKHPEFTKARELGPRFSELNSFEHEYG 434
E F LT++ RPVIVE E+ D+ DG PEK L +K+P + K RE PRF++ +FE+EY
Sbjct: 122 EGVFLLTTTPRPVIVEPLEQLDDEDGLPEK-LAQKNPMYQKERETPPRFAQHGTFEYEYS 180
Query: 435 TRWKQLHELHRQ 470
RWK L E+ +Q
Sbjct: 181 QRWKSLDEMEKQ 192
>BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 93.1 bits (221), Expect = 5e-19
Identities = 46/88 (52%), Positives = 59/88 (67%)
Frame = +1
Query: 1 AKRELDGKLRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDER 180
AK ELD R LRVRF +A+ V+NL P+VSNELL +F FG IERA V VD+R
Sbjct: 348 AKAELDDTPMRGRQLRVRFATHAAALSVRNLSPYVSNELLEEAFSQFGPIERAVVIVDDR 407
Query: 181 GKTLGEGVVEFARKPSALSAIRNCTKNV 264
G++ G+G+VEFA KP+A A C++ V
Sbjct: 408 GRSTGKGIVEFASKPAARKAFERCSEGV 435
Score = 72.9 bits (171), Expect = 6e-13
Identities = 35/72 (48%), Positives = 48/72 (66%)
Frame = +3
Query: 255 EKCFFLTSSLRPVIVESFEEPDEFDGYPEKNLPKKHPEFTKARELGPRFSELNSFEHEYG 434
E F LT++ RPVIVE E+ D+ DG PEK L +K+P + K RE RF++ +FE+EY
Sbjct: 433 EGVFLLTTTPRPVIVEPLEQLDDEDGLPEK-LAQKNPMYQKERETPTRFAQHGTFEYEYS 491
Query: 435 TRWKQLHELHRQ 470
RWK L E+ +Q
Sbjct: 492 QRWKSLDEMEKQ 503
>BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein.
Length = 525
Score = 93.1 bits (221), Expect = 5e-19
Identities = 46/88 (52%), Positives = 59/88 (67%)
Frame = +1
Query: 1 AKRELDGKLRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDER 180
AK ELD R LRVRF +A+ V+NL P+VSNELL +F FG IERA V VD+R
Sbjct: 348 AKAELDDTPMRGRQLRVRFATHAAALSVRNLSPYVSNELLEEAFSQFGPIERAVVIVDDR 407
Query: 181 GKTLGEGVVEFARKPSALSAIRNCTKNV 264
G++ G+G+VEFA KP+A A C++ V
Sbjct: 408 GRSTGKGIVEFASKPAARKAFERCSEGV 435
Score = 76.2 bits (179), Expect = 6e-14
Identities = 36/72 (50%), Positives = 49/72 (68%)
Frame = +3
Query: 255 EKCFFLTSSLRPVIVESFEEPDEFDGYPEKNLPKKHPEFTKARELGPRFSELNSFEHEYG 434
E F LT++ RPVIVE E+ D+ DG PEK L +K+P + K RE PRF++ +FE+EY
Sbjct: 433 EGVFLLTTTPRPVIVEPLEQLDDEDGLPEK-LAQKNPMYQKERETPPRFAQHGTFEYEYS 491
Query: 435 TRWKQLHELHRQ 470
RWK L E+ +Q
Sbjct: 492 QRWKSLDEMEKQ 503
>BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein.
Length = 634
Score = 93.1 bits (221), Expect = 5e-19
Identities = 46/88 (52%), Positives = 59/88 (67%)
Frame = +1
Query: 1 AKRELDGKLRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDER 180
AK ELD R LRVRF +A+ V+NL P+VSNELL +F FG IERA V VD+R
Sbjct: 275 AKAELDDTPMRGRQLRVRFATHAAALSVRNLSPYVSNELLEEAFSQFGPIERAVVIVDDR 334
Query: 181 GKTLGEGVVEFARKPSALSAIRNCTKNV 264
G++ G+G+VEFA KP+A A C++ V
Sbjct: 335 GRSTGKGIVEFASKPAARKAFERCSEGV 362
Score = 76.2 bits (179), Expect = 6e-14
Identities = 36/72 (50%), Positives = 49/72 (68%)
Frame = +3
Query: 255 EKCFFLTSSLRPVIVESFEEPDEFDGYPEKNLPKKHPEFTKARELGPRFSELNSFEHEYG 434
E F LT++ RPVIVE E+ D+ DG PEK L +K+P + K RE PRF++ +FE+EY
Sbjct: 360 EGVFLLTTTPRPVIVEPLEQLDDEDGLPEK-LAQKNPMYQKERETPPRFAQHGTFEYEYS 418
Query: 435 TRWKQLHELHRQ 470
RWK L E+ +Q
Sbjct: 419 QRWKSLDEMEKQ 430
>AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 93.1 bits (221), Expect = 5e-19
Identities = 46/88 (52%), Positives = 59/88 (67%)
Frame = +1
Query: 1 AKRELDGKLRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDER 180
AK ELD R LRVRF +A+ V+NL P+VSNELL +F FG IERA V VD+R
Sbjct: 348 AKAELDDTPMRGRQLRVRFATHAAALSVRNLSPYVSNELLEEAFSQFGPIERAVVIVDDR 407
Query: 181 GKTLGEGVVEFARKPSALSAIRNCTKNV 264
G++ G+G+VEFA KP+A A C++ V
Sbjct: 408 GRSTGKGIVEFASKPAARKAFERCSEGV 435
Score = 76.2 bits (179), Expect = 6e-14
Identities = 36/72 (50%), Positives = 49/72 (68%)
Frame = +3
Query: 255 EKCFFLTSSLRPVIVESFEEPDEFDGYPEKNLPKKHPEFTKARELGPRFSELNSFEHEYG 434
E F LT++ RPVIVE E+ D+ DG PEK L +K+P + K RE PRF++ +FE+EY
Sbjct: 433 EGVFLLTTTPRPVIVEPLEQLDDEDGLPEK-LAQKNPMYQKERETPPRFAQHGTFEYEYS 491
Query: 435 TRWKQLHELHRQ 470
RWK L E+ +Q
Sbjct: 492 QRWKSLDEMEKQ 503
>L14599-1|AAC37578.1| 471|Homo sapiens protein ( Human mRNA,
complete cds. ).
Length = 471
Score = 89.0 bits (211), Expect = 8e-18
Identities = 41/86 (47%), Positives = 61/86 (70%)
Frame = +1
Query: 1 AKRELDGKLRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDER 180
AK ELD + LRVRF ++++ V+NLP +VSNELL +F +FG++ERA V VD+R
Sbjct: 125 AKVELDNMPLRGKQLRVRFACHSASLHVRNLPQYVSNELLEEAFSVFGQVERAVVIVDDR 184
Query: 181 GKTLGEGVVEFARKPSALSAIRNCTK 258
G+ G+G+VEF+ KP+A A+ C++
Sbjct: 185 GRPSGKGIVEFSGKPAARKALDRCSE 210
Score = 66.9 bits (156), Expect = 4e-11
Identities = 34/72 (47%), Positives = 46/72 (63%)
Frame = +3
Query: 255 EKCFFLTSSLRPVIVESFEEPDEFDGYPEKNLPKKHPEFTKARELGPRFSELNSFEHEYG 434
E F LT+ RPV VE ++ D+ +G PEK L K+ +F K RE PRF++ SFE+EY
Sbjct: 210 EGSFLLTTFPRPVTVEPMDQLDDEEGLPEK-LVIKNQQFHKEREQPPRFAQPGSFEYEYA 268
Query: 435 TRWKQLHELHRQ 470
RWK L E+ +Q
Sbjct: 269 MRWKALIEMEKQ 280
Score = 29.5 bits (63), Expect = 7.1
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 25 LRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDE 177
L+N R + S + V NLPP ++ E + + FE +GK ++ D+
Sbjct: 59 LKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDK 109
>Y11289-1|CAA72157.1| 471|Homo sapiens p54nrb protein.
Length = 471
Score = 88.6 bits (210), Expect = 1e-17
Identities = 41/86 (47%), Positives = 61/86 (70%)
Frame = +1
Query: 1 AKRELDGKLRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDER 180
AK ELD + LRVRF ++++ V+NLP +VSNELL +F +FG++ERA V VD+R
Sbjct: 125 AKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNELLEEAFSVFGQVERAVVIVDDR 184
Query: 181 GKTLGEGVVEFARKPSALSAIRNCTK 258
G+ G+G+VEF+ KP+A A+ C++
Sbjct: 185 GRPSGKGIVEFSGKPAARKALDRCSE 210
Score = 66.9 bits (156), Expect = 4e-11
Identities = 34/72 (47%), Positives = 46/72 (63%)
Frame = +3
Query: 255 EKCFFLTSSLRPVIVESFEEPDEFDGYPEKNLPKKHPEFTKARELGPRFSELNSFEHEYG 434
E F LT+ RPV VE ++ D+ +G PEK L K+ +F K RE PRF++ SFE+EY
Sbjct: 210 EGSFLLTTFPRPVTVEPMDQLDDEEGLPEK-LVIKNQQFHKEREQPPRFAQPGSFEYEYA 268
Query: 435 TRWKQLHELHRQ 470
RWK L E+ +Q
Sbjct: 269 MRWKALIEMEKQ 280
Score = 29.5 bits (63), Expect = 7.1
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 25 LRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDE 177
L+N R + S + V NLPP ++ E + + FE +GK ++ D+
Sbjct: 59 LKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDK 109
>U89867-1|AAC51852.1| 471|Homo sapiens nuclear matrix protein 55
protein.
Length = 471
Score = 88.6 bits (210), Expect = 1e-17
Identities = 41/86 (47%), Positives = 61/86 (70%)
Frame = +1
Query: 1 AKRELDGKLRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDER 180
AK ELD + LRVRF ++++ V+NLP +VSNELL +F +FG++ERA V VD+R
Sbjct: 125 AKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNELLEEAFSVFGQVERAVVIVDDR 184
Query: 181 GKTLGEGVVEFARKPSALSAIRNCTK 258
G+ G+G+VEF+ KP+A A+ C++
Sbjct: 185 GRPSGKGIVEFSGKPAARKALDRCSE 210
Score = 66.9 bits (156), Expect = 4e-11
Identities = 34/72 (47%), Positives = 46/72 (63%)
Frame = +3
Query: 255 EKCFFLTSSLRPVIVESFEEPDEFDGYPEKNLPKKHPEFTKARELGPRFSELNSFEHEYG 434
E F LT+ RPV VE ++ D+ +G PEK L K+ +F K RE PRF++ SFE+EY
Sbjct: 210 EGSFLLTTFPRPVTVEPMDQLDDEEGLPEK-LVIKNQQFHKEREQPPRFAQPGSFEYEYA 268
Query: 435 TRWKQLHELHRQ 470
RWK L E+ +Q
Sbjct: 269 MRWKALIEMEKQ 280
Score = 29.5 bits (63), Expect = 7.1
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 25 LRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDE 177
L+N R + S + V NLPP ++ E + + FE +GK ++ D+
Sbjct: 59 LKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDK 109
>U02493-1|AAA03427.1| 471|Homo sapiens 54 kDa protein protein.
Length = 471
Score = 88.6 bits (210), Expect = 1e-17
Identities = 41/86 (47%), Positives = 61/86 (70%)
Frame = +1
Query: 1 AKRELDGKLRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDER 180
AK ELD + LRVRF ++++ V+NLP +VSNELL +F +FG++ERA V VD+R
Sbjct: 125 AKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNELLEEAFSVFGQVERAVVIVDDR 184
Query: 181 GKTLGEGVVEFARKPSALSAIRNCTK 258
G+ G+G+VEF+ KP+A A+ C++
Sbjct: 185 GRPSGKGIVEFSGKPAARKALDRCSE 210
Score = 66.9 bits (156), Expect = 4e-11
Identities = 34/72 (47%), Positives = 46/72 (63%)
Frame = +3
Query: 255 EKCFFLTSSLRPVIVESFEEPDEFDGYPEKNLPKKHPEFTKARELGPRFSELNSFEHEYG 434
E F LT+ RPV VE ++ D+ +G PEK L K+ +F K RE PRF++ SFE+EY
Sbjct: 210 EGSFLLTTFPRPVTVEPMDQLDDEEGLPEK-LVIKNQQFHKEREQPPRFAQPGSFEYEYA 268
Query: 435 TRWKQLHELHRQ 470
RWK L E+ +Q
Sbjct: 269 MRWKALIEMEKQ 280
Score = 29.5 bits (63), Expect = 7.1
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 25 LRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDE 177
L+N R + S + V NLPP ++ E + + FE +GK ++ D+
Sbjct: 59 LKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDK 109
>CR456761-1|CAG33042.1| 471|Homo sapiens NONO protein.
Length = 471
Score = 88.6 bits (210), Expect = 1e-17
Identities = 41/86 (47%), Positives = 61/86 (70%)
Frame = +1
Query: 1 AKRELDGKLRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDER 180
AK ELD + LRVRF ++++ V+NLP +VSNELL +F +FG++ERA V VD+R
Sbjct: 125 AKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNELLEEAFSVFGQVERAVVIVDDR 184
Query: 181 GKTLGEGVVEFARKPSALSAIRNCTK 258
G+ G+G+VEF+ KP+A A+ C++
Sbjct: 185 GRPSGKGIVEFSGKPAARKALDRCSE 210
Score = 66.9 bits (156), Expect = 4e-11
Identities = 34/72 (47%), Positives = 46/72 (63%)
Frame = +3
Query: 255 EKCFFLTSSLRPVIVESFEEPDEFDGYPEKNLPKKHPEFTKARELGPRFSELNSFEHEYG 434
E F LT+ RPV VE ++ D+ +G PEK L K+ +F K RE PRF++ SFE+EY
Sbjct: 210 EGSFLLTTFPRPVTVEPMDQLDDEEGLPEK-LVIKNQQFHKEREQPPRFAQPGSFEYEYA 268
Query: 435 TRWKQLHELHRQ 470
RWK L E+ +Q
Sbjct: 269 MRWKALIEMEKQ 280
Score = 29.5 bits (63), Expect = 7.1
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 25 LRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDE 177
L+N R + S + V NLPP ++ E + + FE +GK ++ D+
Sbjct: 59 LKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDK 109
>BC069639-1|AAH69639.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 88.6 bits (210), Expect = 1e-17
Identities = 41/86 (47%), Positives = 61/86 (70%)
Frame = +1
Query: 1 AKRELDGKLRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDER 180
AK ELD + LRVRF ++++ V+NLP +VSNELL +F +FG++ERA V VD+R
Sbjct: 125 AKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNELLEEAFSVFGQVERAVVIVDDR 184
Query: 181 GKTLGEGVVEFARKPSALSAIRNCTK 258
G+ G+G+VEF+ KP+A A+ C++
Sbjct: 185 GRPSGKGIVEFSGKPAARKALDRCSE 210
Score = 66.9 bits (156), Expect = 4e-11
Identities = 34/72 (47%), Positives = 46/72 (63%)
Frame = +3
Query: 255 EKCFFLTSSLRPVIVESFEEPDEFDGYPEKNLPKKHPEFTKARELGPRFSELNSFEHEYG 434
E F LT+ RPV VE ++ D+ +G PEK L K+ +F K RE PRF++ SFE+EY
Sbjct: 210 EGSFLLTTFPRPVTVEPMDQLDDEEGLPEK-LVIKNQQFHKEREQPPRFAQPGSFEYEYA 268
Query: 435 TRWKQLHELHRQ 470
RWK L E+ +Q
Sbjct: 269 MRWKALIEMEKQ 280
Score = 29.5 bits (63), Expect = 7.1
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 25 LRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDE 177
L+N R + S + V NLPP ++ E + + FE +GK ++ D+
Sbjct: 59 LKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDK 109
>BC069616-1|AAH69616.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 88.6 bits (210), Expect = 1e-17
Identities = 41/86 (47%), Positives = 61/86 (70%)
Frame = +1
Query: 1 AKRELDGKLRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDER 180
AK ELD + LRVRF ++++ V+NLP +VSNELL +F +FG++ERA V VD+R
Sbjct: 125 AKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNELLEEAFSVFGQVERAVVIVDDR 184
Query: 181 GKTLGEGVVEFARKPSALSAIRNCTK 258
G+ G+G+VEF+ KP+A A+ C++
Sbjct: 185 GRPSGKGIVEFSGKPAARKALDRCSE 210
Score = 66.9 bits (156), Expect = 4e-11
Identities = 34/72 (47%), Positives = 46/72 (63%)
Frame = +3
Query: 255 EKCFFLTSSLRPVIVESFEEPDEFDGYPEKNLPKKHPEFTKARELGPRFSELNSFEHEYG 434
E F LT+ RPV VE ++ D+ +G PEK L K+ +F K RE PRF++ SFE+EY
Sbjct: 210 EGSFLLTTFPRPVTVEPMDQLDDEEGLPEK-LVIKNQQFHKEREQPPRFAQPGSFEYEYA 268
Query: 435 TRWKQLHELHRQ 470
RWK L E+ +Q
Sbjct: 269 MRWKALIEMEKQ 280
Score = 29.5 bits (63), Expect = 7.1
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 25 LRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDE 177
L+N R + S + V NLPP ++ E + + FE +GK ++ D+
Sbjct: 59 LKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDK 109
>BC028299-1|AAH28299.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 88.6 bits (210), Expect = 1e-17
Identities = 41/86 (47%), Positives = 61/86 (70%)
Frame = +1
Query: 1 AKRELDGKLRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDER 180
AK ELD + LRVRF ++++ V+NLP +VSNELL +F +FG++ERA V VD+R
Sbjct: 125 AKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNELLEEAFSVFGQVERAVVIVDDR 184
Query: 181 GKTLGEGVVEFARKPSALSAIRNCTK 258
G+ G+G+VEF+ KP+A A+ C++
Sbjct: 185 GRPSGKGIVEFSGKPAARKALDRCSE 210
Score = 66.9 bits (156), Expect = 4e-11
Identities = 34/72 (47%), Positives = 46/72 (63%)
Frame = +3
Query: 255 EKCFFLTSSLRPVIVESFEEPDEFDGYPEKNLPKKHPEFTKARELGPRFSELNSFEHEYG 434
E F LT+ RPV VE ++ D+ +G PEK L K+ +F K RE PRF++ SFE+EY
Sbjct: 210 EGSFLLTTFPRPVTVEPMDQLDDEEGLPEK-LVIKNQQFHKEREQPPRFAQPGSFEYEYA 268
Query: 435 TRWKQLHELHRQ 470
RWK L E+ +Q
Sbjct: 269 MRWKALIEMEKQ 280
Score = 29.5 bits (63), Expect = 7.1
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 25 LRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDE 177
L+N R + S + V NLPP ++ E + + FE +GK ++ D+
Sbjct: 59 LKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDK 109
>BC012141-1|AAH12141.1| 471|Homo sapiens NONO protein protein.
Length = 471
Score = 88.6 bits (210), Expect = 1e-17
Identities = 41/86 (47%), Positives = 61/86 (70%)
Frame = +1
Query: 1 AKRELDGKLRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDER 180
AK ELD + LRVRF ++++ V+NLP +VSNELL +F +FG++ERA V VD+R
Sbjct: 125 AKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNELLEEAFSVFGQVERAVVIVDDR 184
Query: 181 GKTLGEGVVEFARKPSALSAIRNCTK 258
G+ G+G+VEF+ KP+A A+ C++
Sbjct: 185 GRPSGKGIVEFSGKPAARKALDRCSE 210
Score = 66.9 bits (156), Expect = 4e-11
Identities = 34/72 (47%), Positives = 46/72 (63%)
Frame = +3
Query: 255 EKCFFLTSSLRPVIVESFEEPDEFDGYPEKNLPKKHPEFTKARELGPRFSELNSFEHEYG 434
E F LT+ RPV VE ++ D+ +G PEK L K+ +F K RE PRF++ SFE+EY
Sbjct: 210 EGSFLLTTFPRPVTVEPMDQLDDEEGLPEK-LVIKNQQFHKEREQPPRFAQPGSFEYEYA 268
Query: 435 TRWKQLHELHRQ 470
RWK L E+ +Q
Sbjct: 269 MRWKALIEMEKQ 280
Score = 29.5 bits (63), Expect = 7.1
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 25 LRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDE 177
L+N R + S + V NLPP ++ E + + FE +GK ++ D+
Sbjct: 59 LKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDK 109
>BC003129-1|AAH03129.1| 471|Homo sapiens NONO protein protein.
Length = 471
Score = 88.6 bits (210), Expect = 1e-17
Identities = 41/86 (47%), Positives = 61/86 (70%)
Frame = +1
Query: 1 AKRELDGKLRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDER 180
AK ELD + LRVRF ++++ V+NLP +VSNELL +F +FG++ERA V VD+R
Sbjct: 125 AKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNELLEEAFSVFGQVERAVVIVDDR 184
Query: 181 GKTLGEGVVEFARKPSALSAIRNCTK 258
G+ G+G+VEF+ KP+A A+ C++
Sbjct: 185 GRPSGKGIVEFSGKPAARKALDRCSE 210
Score = 66.9 bits (156), Expect = 4e-11
Identities = 34/72 (47%), Positives = 46/72 (63%)
Frame = +3
Query: 255 EKCFFLTSSLRPVIVESFEEPDEFDGYPEKNLPKKHPEFTKARELGPRFSELNSFEHEYG 434
E F LT+ RPV VE ++ D+ +G PEK L K+ +F K RE PRF++ SFE+EY
Sbjct: 210 EGSFLLTTFPRPVTVEPMDQLDDEEGLPEK-LVIKNQQFHKEREQPPRFAQPGSFEYEYA 268
Query: 435 TRWKQLHELHRQ 470
RWK L E+ +Q
Sbjct: 269 MRWKALIEMEKQ 280
Score = 29.5 bits (63), Expect = 7.1
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 25 LRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDE 177
L+N R + S + V NLPP ++ E + + FE +GK ++ D+
Sbjct: 59 LKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDK 109
>BC002364-1|AAH02364.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 88.6 bits (210), Expect = 1e-17
Identities = 41/86 (47%), Positives = 61/86 (70%)
Frame = +1
Query: 1 AKRELDGKLRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDER 180
AK ELD + LRVRF ++++ V+NLP +VSNELL +F +FG++ERA V VD+R
Sbjct: 125 AKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNELLEEAFSVFGQVERAVVIVDDR 184
Query: 181 GKTLGEGVVEFARKPSALSAIRNCTK 258
G+ G+G+VEF+ KP+A A+ C++
Sbjct: 185 GRPSGKGIVEFSGKPAARKALDRCSE 210
Score = 66.9 bits (156), Expect = 4e-11
Identities = 34/72 (47%), Positives = 46/72 (63%)
Frame = +3
Query: 255 EKCFFLTSSLRPVIVESFEEPDEFDGYPEKNLPKKHPEFTKARELGPRFSELNSFEHEYG 434
E F LT+ RPV VE ++ D+ +G PEK L K+ +F K RE PRF++ SFE+EY
Sbjct: 210 EGSFLLTTFPRPVTVEPMDQLDDEEGLPEK-LVIKNQQFHKEREQPPRFAQPGSFEYEYA 268
Query: 435 TRWKQLHELHRQ 470
RWK L E+ +Q
Sbjct: 269 MRWKALIEMEKQ 280
Score = 29.5 bits (63), Expect = 7.1
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 25 LRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDE 177
L+N R + S + V NLPP ++ E + + FE +GK ++ D+
Sbjct: 59 LKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDK 109
>AL834505-1|CAD39162.1| 202|Homo sapiens hypothetical protein
protein.
Length = 202
Score = 70.1 bits (164), Expect = 4e-12
Identities = 34/69 (49%), Positives = 47/69 (68%)
Frame = +3
Query: 264 FFLTSSLRPVIVESFEEPDEFDGYPEKNLPKKHPEFTKARELGPRFSELNSFEHEYGTRW 443
F LT++ RPVIVE E+ D+ DG PEK L +K ++ K RE PRF++ +FE EY +RW
Sbjct: 30 FLLTTTPRPVIVEPMEQFDDEDGLPEK-LMQKTQQYHKEREQPPRFAQPGTFEFEYASRW 88
Query: 444 KQLHELHRQ 470
K L E+ +Q
Sbjct: 89 KALDEMEKQ 97
Score = 32.3 bits (70), Expect = 1.0
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 178 RGKTLGEGVVEFARKPSALSAIRNC 252
RG+ G+G VEFA KP A A+ C
Sbjct: 1 RGRATGKGFVEFAAKPPARKALERC 25
>BC037428-1|AAH37428.1| 606|Homo sapiens RAVER1 protein protein.
Length = 606
Score = 43.2 bits (97), Expect = 5e-04
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +1
Query: 37 RTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDER-GKTLGEGVVEF 213
R L V+ P ++ + V NLPP ++ + FG +ER ++ ER G++ G G E+
Sbjct: 121 RELSVQLQPTDALLCVANLPPSLTQQQFEELVRPFGSLERCFLVYSERTGQSKGYGFAEY 180
Query: 214 ARKPSALSA 240
+K SA A
Sbjct: 181 MKKDSAARA 189
>AB075858-1|BAB85564.1| 384|Homo sapiens KIAA1978 protein protein.
Length = 384
Score = 43.2 bits (97), Expect = 5e-04
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +1
Query: 37 RTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDER-GKTLGEGVVEF 213
R L V+ P ++ + V NLPP ++ + FG +ER ++ ER G++ G G E+
Sbjct: 42 RELSVQLQPTDALLCVANLPPSLTQQQFEELVRPFGSLERCFLVYSERTGQSKGYGFAEY 101
Query: 214 ARKPSALSA 240
+K SA A
Sbjct: 102 MKKDSAARA 110
>BC022543-1|AAH22543.1| 217|Homo sapiens zinc finger CCHC-type and
RNA binding motif 1 protein.
Length = 217
Score = 39.5 bits (88), Expect = 0.007
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +1
Query: 61 PXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVD-ERGKTLGEGVVEFARKPSALS 237
P S V V NLP ++N LYR F +GK+ + + D + K+ G + F K SA
Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSA-- 64
Query: 238 AIRNCTKNVSS 270
+NCT+ +++
Sbjct: 65 --QNCTRAINN 73
>BC010177-1|AAH10177.1| 140|Homo sapiens ZCRB1 protein protein.
Length = 140
Score = 39.5 bits (88), Expect = 0.007
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +1
Query: 61 PXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVD-ERGKTLGEGVVEFARKPSALS 237
P S V V NLP ++N LYR F +GK+ + + D + K+ G + F K SA
Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSA-- 64
Query: 238 AIRNCTKNVSS 270
+NCT+ +++
Sbjct: 65 --QNCTRAINN 73
>BC005099-1|AAH05099.1| 141|Homo sapiens Unknown (protein for
IMAGE:3609027) protein.
Length = 141
Score = 39.5 bits (88), Expect = 0.007
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +1
Query: 61 PXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVD-ERGKTLGEGVVEFARKPSALS 237
P S V V NLP ++N LYR F +GK+ + + D + K+ G + F K SA
Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSA-- 64
Query: 238 AIRNCTKNVSS 270
+NCT+ +++
Sbjct: 65 --QNCTRAINN 73
>AB062361-1|BAB56132.1| 217|Homo sapiens ZCRB1 protein protein.
Length = 217
Score = 39.5 bits (88), Expect = 0.007
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +1
Query: 61 PXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVD-ERGKTLGEGVVEFARKPSALS 237
P S V V NLP ++N LYR F +GK+ + + D + K+ G + F K SA
Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSA-- 64
Query: 238 AIRNCTKNVSS 270
+NCT+ +++
Sbjct: 65 --QNCTRAINN 73
>BC041956-1|AAH41956.1| 243|Homo sapiens LOC645974 protein protein.
Length = 243
Score = 39.1 bits (87), Expect = 0.009
Identities = 23/56 (41%), Positives = 29/56 (51%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
V +KNL + N+ LY F FG I V DE+G G G V F ++ SA AI
Sbjct: 135 VFIKNLGKTIDNKALYNIFSAFGNILSCKVACDEKGPK-GYGFVHFQKQESAERAI 189
>AL662864-2|CAI40931.1| 200|Homo sapiens novel protein similar to
poly(A)binding protein, cytoplasmic 1 (LOC340530)
protein.
Length = 200
Score = 39.1 bits (87), Expect = 0.009
Identities = 23/56 (41%), Positives = 29/56 (51%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
V +KNL + N+ LY F FG I V DE+G G G V F ++ SA AI
Sbjct: 92 VFIKNLGKTIDNKALYNIFSAFGNILSCKVACDEKGPK-GYGFVHFQKQESAERAI 146
>AL662864-1|CAI40930.1| 200|Homo sapiens novel protein similar to
poly(A)binding protein, cytoplasmic 1 (LOC340529)
protein.
Length = 200
Score = 39.1 bits (87), Expect = 0.009
Identities = 23/56 (41%), Positives = 29/56 (51%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
V +KNL + N+ LY F FG I V DE+G G G V F ++ SA AI
Sbjct: 92 VFIKNLGKTIDNKALYNIFSAFGNILSCKVACDEKGPK-GYGFVHFQKQESAERAI 146
>BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 36.7 bits (81), Expect = 0.047
Identities = 23/67 (34%), Positives = 34/67 (50%)
Frame = +1
Query: 43 LRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARK 222
L+ + P + +KNL +++E L F FG I RA V + E G+ G GVV F+
Sbjct: 293 LKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMM-EVGQGKGFGVVCFSSF 351
Query: 223 PSALSAI 243
A A+
Sbjct: 352 EEATKAV 358
>AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 218
Score = 36.7 bits (81), Expect = 0.047
Identities = 23/67 (34%), Positives = 34/67 (50%)
Frame = +1
Query: 43 LRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARK 222
L+ + P + +KNL +++E L F FG I RA V + E G+ G GVV F+
Sbjct: 129 LKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMM-EVGQGKGFGVVCFSSF 187
Query: 223 PSALSAI 243
A A+
Sbjct: 188 EEATKAV 194
>AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 36.7 bits (81), Expect = 0.047
Identities = 23/67 (34%), Positives = 34/67 (50%)
Frame = +1
Query: 43 LRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARK 222
L+ + P + +KNL +++E L F FG I RA V + E G+ G GVV F+
Sbjct: 293 LKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMM-EVGQGKGFGVVCFSSF 351
Query: 223 PSALSAI 243
A A+
Sbjct: 352 EEATKAV 358
>AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein
protein.
Length = 367
Score = 36.7 bits (81), Expect = 0.047
Identities = 23/67 (34%), Positives = 34/67 (50%)
Frame = +1
Query: 43 LRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARK 222
L+ + P + +KNL +++E L F FG I RA V + E G+ G GVV F+
Sbjct: 278 LKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMM-EVGQGKGFGVVCFSSF 336
Query: 223 PSALSAI 243
A A+
Sbjct: 337 EEATKAV 343
>AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein
cytoplasmic 5 protein.
Length = 382
Score = 36.7 bits (81), Expect = 0.047
Identities = 23/67 (34%), Positives = 34/67 (50%)
Frame = +1
Query: 43 LRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARK 222
L+ + P + +KNL +++E L F FG I RA V + E G+ G GVV F+
Sbjct: 293 LKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMM-EVGQGKGFGVVCFSSF 351
Query: 223 PSALSAI 243
A A+
Sbjct: 352 EEATKAV 358
>Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding
protein II protein.
Length = 522
Score = 36.3 bits (80), Expect = 0.062
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
+KNL + N+ LY +F FG I V DE G + G G V F + +A AI
Sbjct: 78 IKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAI 130
Score = 32.3 bits (70), Expect = 1.0
Identities = 20/56 (35%), Positives = 25/56 (44%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
V +KN + +E L F FG V DE GK+ G G V F R A A+
Sbjct: 168 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAV 223
>Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for
polyA binding protein. ).
Length = 633
Score = 36.3 bits (80), Expect = 0.062
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
+KNL + N+ LY +F FG I V DE G + G G V F + +A AI
Sbjct: 103 IKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAI 155
Score = 29.1 bits (62), Expect = 9.4
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
V +KN + +E L ++FG V DE GK+ G G V F R A A+
Sbjct: 193 VYIKNFGEDMDDERLK---DLFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAV 245
>U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein
protein.
Length = 636
Score = 36.3 bits (80), Expect = 0.062
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
+KNL + N+ LY +F FG I V DE G + G G V F + +A AI
Sbjct: 103 IKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAI 155
Score = 32.3 bits (70), Expect = 1.0
Identities = 20/56 (35%), Positives = 25/56 (44%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
V +KN + +E L F FG V DE GK+ G G V F R A A+
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAV 248
>BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 36.3 bits (80), Expect = 0.062
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
+KNL + N+ LY +F FG I V DE G + G G V F + +A AI
Sbjct: 103 IKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAI 155
Score = 32.3 bits (70), Expect = 1.0
Identities = 20/56 (35%), Positives = 25/56 (44%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
V +KN + +E L F FG V DE GK+ G G V F R A A+
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAV 248
>BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 36.3 bits (80), Expect = 0.062
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
+KNL + N+ LY +F FG I V DE G + G G V F + +A AI
Sbjct: 103 IKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAI 155
Score = 32.3 bits (70), Expect = 1.0
Identities = 20/56 (35%), Positives = 25/56 (44%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
V +KN + +E L F FG V DE GK+ G G V F R A A+
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAV 248
>BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein.
Length = 636
Score = 36.3 bits (80), Expect = 0.062
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
+KNL + N+ LY +F FG I V DE G + G G V F + +A AI
Sbjct: 103 IKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAI 155
Score = 32.3 bits (70), Expect = 1.0
Identities = 20/56 (35%), Positives = 25/56 (44%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
V +KN + +E L F FG V DE GK+ G G V F R A A+
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAV 248
>AL109839-2|CAI95632.1| 330|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 330
Score = 36.3 bits (80), Expect = 0.062
Identities = 21/54 (38%), Positives = 27/54 (50%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
+KNL + N+ LY +F FG I V DE G + G G V F +A AI
Sbjct: 103 IKNLEDSIDNKALYDTFSTFGNILSCKVACDEHG-SRGFGFVHFETHEAAQQAI 155
Score = 29.9 bits (64), Expect = 5.4
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
+ VKNLP V + L F FGK+ V D G + G V F + A A+
Sbjct: 193 IYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAV 248
>AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 36.3 bits (80), Expect = 0.062
Identities = 21/54 (38%), Positives = 27/54 (50%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
+KNL + N+ LY +F FG I V DE G + G G V F +A AI
Sbjct: 103 IKNLEDSIDNKALYDTFSTFGNILSCKVACDEHG-SRGFGFVHFETHEAAQQAI 155
Score = 29.9 bits (64), Expect = 5.4
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
+ VKNLP V + L F FGK+ V D G + G V F + A A+
Sbjct: 193 IYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAV 248
>AL008725-5|CAI95663.1| 330|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 330
Score = 36.3 bits (80), Expect = 0.062
Identities = 21/54 (38%), Positives = 27/54 (50%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
+KNL + N+ LY +F FG I V DE G + G G V F +A AI
Sbjct: 103 IKNLEDSIDNKALYDTFSTFGNILSCKVACDEHG-SRGFGFVHFETHEAAQQAI 155
Score = 29.9 bits (64), Expect = 5.4
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
+ VKNLP V + L F FGK+ V D G + G V F + A A+
Sbjct: 193 IYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAV 248
>AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 36.3 bits (80), Expect = 0.062
Identities = 21/54 (38%), Positives = 27/54 (50%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
+KNL + N+ LY +F FG I V DE G + G G V F +A AI
Sbjct: 103 IKNLEDSIDNKALYDTFSTFGNILSCKVACDEHG-SRGFGFVHFETHEAAQQAI 155
Score = 29.9 bits (64), Expect = 5.4
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
+ VKNLP V + L F FGK+ V D G + G V F + A A+
Sbjct: 193 IYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAV 248
>AY547318-1|AAS55633.1| 236|Homo sapiens unknown protein.
Length = 236
Score = 35.5 bits (78), Expect = 0.11
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVD-ERGKTLGEGVVEFARKPSALSAIRN 249
V LP ++ L + FE+FG+IE A V D + GK+ G G V A + +A A ++
Sbjct: 15 VGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71
>AL136305-1|CAC36889.1| 236|Homo sapiens protein ( Human DNA
sequence from clone RP1-259A10 on chromosome 6p22.1-23
Contains the gene for an ssDNA binding protein and a CpG
island. ).
Length = 236
Score = 35.5 bits (78), Expect = 0.11
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVD-ERGKTLGEGVVEFARKPSALSAIRN 249
V LP ++ L + FE+FG+IE A V D + GK+ G G V A + +A A ++
Sbjct: 15 VGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71
>AK095016-1|BAC04474.1| 211|Homo sapiens protein ( Homo sapiens
cDNA FLJ37697 fis, clone BRHIP2015360, highly similar to
Xenopus laevis RRM-containing protein SEB-4 mRNA. ).
Length = 211
Score = 35.5 bits (78), Expect = 0.11
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVD-ERGKTLGEGVVEFARKPSALSAIRN 249
V LP ++ L + FE+FG+IE A V D + GK+ G G V A + +A A ++
Sbjct: 15 VGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71
>BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein.
Length = 631
Score = 35.1 bits (77), Expect = 0.14
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
V +KNL + N++LY +F FG I V DE G + G V F + +A AI
Sbjct: 101 VFIKNLDKSIDNKVLYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAI 155
Score = 32.3 bits (70), Expect = 1.0
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
+KNL + +E L + F FG I A V +++ G++ G G V F+ A A+
Sbjct: 298 IKNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAV 350
Score = 31.5 bits (68), Expect = 1.8
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
V +KN V +E L F FGK V D GK+ G G V + + A A+
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAV 248
>CR457134-1|CAG33415.1| 320|Homo sapiens EIF3S4 protein.
Length = 320
Score = 34.7 bits (76), Expect = 0.19
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +1
Query: 16 DGKLRNSRTLRV-RFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDE-RGKT 189
DG R +++ R N+ +RV NL L F FG I R Y+ D+ G++
Sbjct: 220 DGASRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQS 279
Query: 190 LGEGVVEFARKPSALSAI 243
G + F R+ A AI
Sbjct: 280 KGFAFISFHRREDAARAI 297
>BT006889-1|AAP35535.1| 320|Homo sapiens eukaryotic translation
initiation factor 3, subunit 4 delta, 44kDa protein.
Length = 320
Score = 34.7 bits (76), Expect = 0.19
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +1
Query: 16 DGKLRNSRTLRV-RFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDE-RGKT 189
DG R +++ R N+ +RV NL L F FG I R Y+ D+ G++
Sbjct: 220 DGASRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQS 279
Query: 190 LGEGVVEFARKPSALSAI 243
G + F R+ A AI
Sbjct: 280 KGFAFISFHRREDAARAI 297
>BC008469-1|AAH08469.1| 320|Homo sapiens eukaryotic translation
initiation factor 3, subunit 4 delta, 44kDa protein.
Length = 320
Score = 34.7 bits (76), Expect = 0.19
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +1
Query: 16 DGKLRNSRTLRV-RFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDE-RGKT 189
DG R +++ R N+ +RV NL L F FG I R Y+ D+ G++
Sbjct: 220 DGASRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQS 279
Query: 190 LGEGVVEFARKPSALSAI 243
G + F R+ A AI
Sbjct: 280 KGFAFISFHRREDAARAI 297
>BC000733-1|AAH00733.1| 320|Homo sapiens eukaryotic translation
initiation factor 3, subunit 4 delta, 44kDa protein.
Length = 320
Score = 34.7 bits (76), Expect = 0.19
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +1
Query: 16 DGKLRNSRTLRV-RFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDE-RGKT 189
DG R +++ R N+ +RV NL L F FG I R Y+ D+ G++
Sbjct: 220 DGASRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQS 279
Query: 190 LGEGVVEFARKPSALSAI 243
G + F R+ A AI
Sbjct: 280 KGFAFISFHRREDAARAI 297
>AF094850-1|AAG15419.1| 320|Homo sapiens eukaryotic translation
initiation factor 3 subunit p42/p44 protein.
Length = 320
Score = 34.7 bits (76), Expect = 0.19
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +1
Query: 16 DGKLRNSRTLRV-RFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDE-RGKT 189
DG R +++ R N+ +RV NL L F FG I R Y+ D+ G++
Sbjct: 220 DGASRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQS 279
Query: 190 LGEGVVEFARKPSALSAI 243
G + F R+ A AI
Sbjct: 280 KGFAFISFHRREDAARAI 297
>AF092453-1|AAG15396.1| 320|Homo sapiens eukaryotic translation
initiation factor 3 subunit p42/p44 protein.
Length = 320
Score = 34.7 bits (76), Expect = 0.19
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +1
Query: 16 DGKLRNSRTLRV-RFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDE-RGKT 189
DG R +++ R N+ +RV NL L F FG I R Y+ D+ G++
Sbjct: 220 DGASRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQS 279
Query: 190 LGEGVVEFARKPSALSAI 243
G + F R+ A AI
Sbjct: 280 KGFAFISFHRREDAARAI 297
>AF020833-1|AAB71866.1| 320|Homo sapiens eukaryotic translation
initiation factor 3 subunit protein.
Length = 320
Score = 34.7 bits (76), Expect = 0.19
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +1
Query: 16 DGKLRNSRTLRV-RFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDE-RGKT 189
DG R +++ R N+ +RV NL L F FG I R Y+ D+ G++
Sbjct: 220 DGASRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQS 279
Query: 190 LGEGVVEFARKPSALSAI 243
G + F R+ A AI
Sbjct: 280 KGFAFISFHRREDAARAI 297
>U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding
protein protein.
Length = 644
Score = 34.3 bits (75), Expect = 0.25
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
V +KNL + N+ LY +F FG I V DE G + G V F + +A AI
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAI 155
Score = 32.3 bits (70), Expect = 1.0
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
+KNL + +E L + F FG I A V +++ G++ G G V F+ A A+
Sbjct: 298 IKNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAV 350
Score = 31.5 bits (68), Expect = 1.8
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
V +KN V +E L F FGK V D GK+ G G V + + A A+
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAV 248
>U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding
protein protein.
Length = 644
Score = 34.3 bits (75), Expect = 0.25
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
V +KNL + N+ LY +F FG I V DE G + G V F + +A AI
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAI 155
Score = 32.3 bits (70), Expect = 1.0
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
+KNL + +E L + F FG I A V +++ G++ G G V F+ A A+
Sbjct: 298 IKNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAV 350
Score = 31.5 bits (68), Expect = 1.8
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
V +KN V +E L F FGK V D GK+ G G V + + A A+
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAV 248
>DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein.
Length = 630
Score = 34.3 bits (75), Expect = 0.25
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAIR 246
VKNL ++N+ LY + FG I V DE G + G G V F +A AI+
Sbjct: 103 VKNLDKSINNKALYDTVSAFGNILSCNVVCDENG-SKGYGFVHFETHEAAERAIK 156
Score = 32.3 bits (70), Expect = 1.0
Identities = 20/56 (35%), Positives = 25/56 (44%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
V +KN + +E L F FG V DE GK+ G G V F R A A+
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAV 248
>BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 34.3 bits (75), Expect = 0.25
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
V +KNL + N+ LY +F FG I V DE G + G V F + +A AI
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAI 155
Score = 32.3 bits (70), Expect = 1.0
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
+KNL + +E L + F FG I A V +++ G++ G G V F+ A A+
Sbjct: 298 IKNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAV 350
Score = 31.5 bits (68), Expect = 1.8
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
V +KN V +E L F FGK V D GK+ G G V + + A A+
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAV 248
>BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 34.3 bits (75), Expect = 0.25
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
V +KNL + N+ LY +F FG I V DE G + G V F + +A AI
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAI 155
Score = 32.3 bits (70), Expect = 1.0
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
+KNL + +E L + F FG I A V +++ G++ G G V F+ A A+
Sbjct: 298 IKNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAV 350
Score = 31.5 bits (68), Expect = 1.8
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
V +KN V +E L F FGK V D GK+ G G V + + A A+
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAV 248
>BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 34.3 bits (75), Expect = 0.25
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAIR 246
VKNL ++N+ LY + FG I V DE G + G G V F +A AI+
Sbjct: 103 VKNLDKSINNKALYDTVSAFGNILSCNVVCDENG-SKGYGFVHFETHEAAERAIK 156
Score = 32.3 bits (70), Expect = 1.0
Identities = 20/56 (35%), Positives = 25/56 (44%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
V +KN + +E L F FG V DE GK+ G G V F R A A+
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAV 248
>BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 34.3 bits (75), Expect = 0.25
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAIR 246
VKNL ++N+ LY + FG I V DE G + G G V F +A AI+
Sbjct: 103 VKNLDKSINNKALYDTVSAFGNILSCNVVCDENG-SKGYGFVHFETHEAAERAIK 156
Score = 32.3 bits (70), Expect = 1.0
Identities = 20/56 (35%), Positives = 25/56 (44%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
V +KN + +E L F FG V DE GK+ G G V F R A A+
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAV 248
>AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibletaining 6 protein.
Length = 644
Score = 34.3 bits (75), Expect = 0.25
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
V +KNL + N+ LY +F FG I V DE G + G V F + +A AI
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAI 155
Score = 32.3 bits (70), Expect = 1.0
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
+KNL + +E L + F FG I A V +++ G++ G G V F+ A A+
Sbjct: 298 IKNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAV 350
Score = 31.5 bits (68), Expect = 1.8
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
V +KN V +E L F FGK V D GK+ G G V + + A A+
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAV 248
>AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleseudogene protein.
Length = 660
Score = 34.3 bits (75), Expect = 0.25
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
V +KNL + N+ LY +F FG I V DE G + G V F + +A AI
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAI 155
Score = 32.3 bits (70), Expect = 1.0
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
+KNL + +E L + F FG I A V +++ G++ G G V F+ A A+
Sbjct: 298 IKNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAV 350
Score = 31.5 bits (68), Expect = 1.8
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
V +KN V +E L F FGK V D GK+ G G V + + A A+
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAV 248
>AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeudogene protein.
Length = 615
Score = 34.3 bits (75), Expect = 0.25
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
V +KNL + N+ LY +F FG I V DE G + G V F + +A AI
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAI 155
Score = 32.3 bits (70), Expect = 1.0
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
+KNL + +E L + F FG I A V +++ G++ G G V F+ A A+
Sbjct: 298 IKNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAV 350
Score = 31.5 bits (68), Expect = 1.8
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
V +KN V +E L F FGK V D GK+ G G V + + A A+
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAV 248
>AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblepeptide, antigen CD29 includes
protein.
Length = 644
Score = 34.3 bits (75), Expect = 0.25
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
V +KNL + N+ LY +F FG I V DE G + G V F + +A AI
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAI 155
Score = 32.3 bits (70), Expect = 1.0
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
+KNL + +E L + F FG I A V +++ G++ G G V F+ A A+
Sbjct: 298 IKNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAV 350
Score = 31.5 bits (68), Expect = 1.8
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
V +KN V +E L F FGK V D GK+ G G V + + A A+
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAV 248
>AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducible) pseudogene protein.
Length = 660
Score = 34.3 bits (75), Expect = 0.25
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
V +KNL + N+ LY +F FG I V DE G + G V F + +A AI
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAI 155
Score = 32.3 bits (70), Expect = 1.0
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
+KNL + +E L + F FG I A V +++ G++ G G V F+ A A+
Sbjct: 298 IKNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAV 350
Score = 31.5 bits (68), Expect = 1.8
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
V +KN V +E L F FGK V D GK+ G G V + + A A+
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAV 248
>AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblely, member 5 protein.
Length = 615
Score = 34.3 bits (75), Expect = 0.25
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
V +KNL + N+ LY +F FG I V DE G + G V F + +A AI
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAI 155
Score = 32.3 bits (70), Expect = 1.0
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
+KNL + +E L + F FG I A V +++ G++ G G V F+ A A+
Sbjct: 298 IKNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAV 350
Score = 31.5 bits (68), Expect = 1.8
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
V +KN V +E L F FGK V D GK+ G G V + + A A+
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAV 248
>AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 34.3 bits (75), Expect = 0.25
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAIR 246
VKNL ++N+ LY + FG I V DE G + G G V F +A AI+
Sbjct: 103 VKNLDKSINNKALYDTVSAFGNILSCNVVCDENG-SKGYGFVHFETHEAAERAIK 156
Score = 32.3 bits (70), Expect = 1.0
Identities = 20/56 (35%), Positives = 25/56 (44%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
V +KN + +E L F FG V DE GK+ G G V F R A A+
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAV 248
>AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific
poly(A)-binding protein protein.
Length = 631
Score = 34.3 bits (75), Expect = 0.25
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAIR 246
VKNL ++N+ LY + FG I V DE G + G G V F +A AI+
Sbjct: 103 VKNLDKSINNKALYDTVSAFGNILSCNVVCDENG-SKGYGFVHFETHEAAERAIK 156
Score = 32.3 bits (70), Expect = 1.0
Identities = 20/56 (35%), Positives = 25/56 (44%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
V +KN + +E L F FG V DE GK+ G G V F R A A+
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAV 248
>U96074-1|AAC78728.1| 320|Homo sapiens translation initiation
factor eIF3 p44 subunit protein.
Length = 320
Score = 32.7 bits (71), Expect = 0.77
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +1
Query: 16 DGKLRNSRTLRV-RFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDE-RGKT 189
DG R +++ R N+ +RV NL L F FG I R Y+ D+ G++
Sbjct: 220 DGASRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQS 279
Query: 190 LGEGVVEFARKPSALSAI 243
G + F R+ AI
Sbjct: 280 KGFAFISFHRREDRARAI 297
>BC132973-1|AAI32974.1| 1023|Homo sapiens peroxisome
proliferator-activated receptor gamma, coactivator 1 beta
protein.
Length = 1023
Score = 32.7 bits (71), Expect = 0.77
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 25 LRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKV-DERGKTLG 195
+R++R R + V ++NL +S+ L R FE+FG+IE V + RG+ G
Sbjct: 887 IRHARKRREKAIGEGRVVYIQNLSSDMSSRELKRRFEVFGEIEECEVLTRNRRGEKYG 944
>BC132971-1|AAI32972.1| 1023|Homo sapiens peroxisome
proliferator-activated receptor gamma, coactivator 1 beta
protein.
Length = 1023
Score = 32.7 bits (71), Expect = 0.77
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 25 LRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKV-DERGKTLG 195
+R++R R + V ++NL +S+ L R FE+FG+IE V + RG+ G
Sbjct: 887 IRHARKRREKAIGEGRVVYIQNLSSDMSSRELKRRFEVFGEIEECEVLTRNRRGEKYG 944
>BC026956-1|AAH26956.1| 741|Homo sapiens PPARGC1B protein protein.
Length = 741
Score = 32.7 bits (71), Expect = 0.77
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 25 LRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKV-DERGKTLG 195
+R++R R + V ++NL +S+ L R FE+FG+IE V + RG+ G
Sbjct: 573 IRHARKRREKAIGEGRVVYIQNLSSDMSSRELKRRFEVFGEIEECEVLTRNRRGEKYG 630
>AY188950-1|AAO40025.1| 996|Homo sapiens peroxisome
proliferator-activated receptor gamma coactivator
1beta-2b protein.
Length = 996
Score = 32.7 bits (71), Expect = 0.77
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 25 LRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKV-DERGKTLG 195
+R++R R + V ++NL +S+ L R FE+FG+IE V + RG+ G
Sbjct: 866 IRHARKRREKAIGEGRVVYIQNLSSDMSSRELKRRFEVFGEIEECEVLTRNRRGEKYG 923
>AY188949-1|AAO40024.1| 1002|Homo sapiens peroxisome
proliferator-activated receptor gamma coactivator
1beta-2a protein.
Length = 1002
Score = 32.7 bits (71), Expect = 0.77
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 25 LRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKV-DERGKTLG 195
+R++R R + V ++NL +S+ L R FE+FG+IE V + RG+ G
Sbjct: 866 IRHARKRREKAIGEGRVVYIQNLSSDMSSRELKRRFEVFGEIEECEVLTRNRRGEKYG 923
>AY188948-1|AAO40023.1| 1017|Homo sapiens peroxisome
proliferator-activated receptor gamma coactivator
1beta-1b protein.
Length = 1017
Score = 32.7 bits (71), Expect = 0.77
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 25 LRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKV-DERGKTLG 195
+R++R R + V ++NL +S+ L R FE+FG+IE V + RG+ G
Sbjct: 887 IRHARKRREKAIGEGRVVYIQNLSSDMSSRELKRRFEVFGEIEECEVLTRNRRGEKYG 944
>AY188947-1|AAO40022.1| 1023|Homo sapiens peroxisome
proliferator-activated receptor gamma coactivator
1beta-1a protein.
Length = 1023
Score = 32.7 bits (71), Expect = 0.77
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 25 LRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKV-DERGKTLG 195
+R++R R + V ++NL +S+ L R FE+FG+IE V + RG+ G
Sbjct: 887 IRHARKRREKAIGEGRVVYIQNLSSDMSSRELKRRFEVFGEIEECEVLTRNRRGEKYG 944
>AK095391-1|BAC04541.1| 1023|Homo sapiens protein ( Homo sapiens cDNA
FLJ38072 fis, clone CTONG2015678, weakly similar to
Rattus norvegicus PGC1 mRNA for PPAR gamma coactivator.
).
Length = 1023
Score = 32.7 bits (71), Expect = 0.77
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 25 LRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKV-DERGKTLG 195
+R++R R + V ++NL +S+ L R FE+FG+IE V + RG+ G
Sbjct: 887 IRHARKRREKAIGEGRVVYIQNLSSDMSSRELKRRFEVFGEIEECEVLTRNRRGEKYG 944
>AF468497-1|AAL78634.1| 984|Homo sapiens PGC-1-related estrogen
receptor alpha coactivator short isoform protein.
Length = 984
Score = 32.7 bits (71), Expect = 0.77
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 25 LRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKV-DERGKTLG 195
+R++R R + V ++NL +S+ L R FE+FG+IE V + RG+ G
Sbjct: 848 IRHARKRREKAIGEGRVVYIQNLSSDMSSRELKRRFEVFGEIEECEVLTRNRRGEKYG 905
>AF468496-1|AAL78633.1| 1023|Homo sapiens PGC-1-related estrogen
receptor alpha coactivator protein.
Length = 1023
Score = 32.7 bits (71), Expect = 0.77
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 25 LRNSRTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKV-DERGKTLG 195
+R++R R + V ++NL +S+ L R FE+FG+IE V + RG+ G
Sbjct: 887 IRHARKRREKAIGEGRVVYIQNLSSDMSSRELKRRFEVFGEIEECEVLTRNRRGEKYG 944
>AB046799-1|BAB13405.1| 704|Homo sapiens KIAA1579 protein protein.
Length = 704
Score = 32.7 bits (71), Expect = 0.77
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +1
Query: 37 RTLRVRFXPXNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDE-RGKTLGEGVVEF 213
+ L V+ P ++ + + N+P ++E +G IER ++ E G + G G VE+
Sbjct: 157 KDLIVQLQPTDALLCITNVPISFTSEEFEELVRAYGNIERCFLVYSEVTGHSKGYGFVEY 216
Query: 214 ARKPSALSA 240
+K A A
Sbjct: 217 MKKDFAAKA 225
>D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding
protein II protein.
Length = 193
Score = 32.3 bits (70), Expect = 1.0
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
+KNL + +E L + F FG I A V +++ G++ G G V F+ A A+
Sbjct: 109 IKNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAV 161
Score = 31.5 bits (68), Expect = 1.8
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +1
Query: 76 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
V +KN V +E L F FGK V D GK+ G G V + + A A+
Sbjct: 4 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAV 59
>BC118568-1|AAI18569.1| 252|Homo sapiens PABPC4 protein protein.
Length = 252
Score = 32.3 bits (70), Expect = 1.0
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
+KNL + +E L + F FG I A V +++ G++ G G V F+ A A+
Sbjct: 48 IKNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAV 100
>BC106908-1|AAI06909.1| 281|Homo sapiens PABPC4 protein protein.
Length = 281
Score = 32.3 bits (70), Expect = 1.0
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
+KNL + +E L + F FG I A V +++ G++ G G V F+ A A+
Sbjct: 48 IKNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAV 100
>AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblela) protein.
Length = 410
Score = 32.3 bits (70), Expect = 1.0
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
+KNL + +E L + F FG I A V +++ G++ G G V F+ A A+
Sbjct: 77 IKNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAV 129
>AK222917-1|BAD96637.1| 371|Homo sapiens PABPC4 protein variant
protein.
Length = 371
Score = 32.3 bits (70), Expect = 1.0
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAI 243
+KNL + +E L + F FG I A V +++ G++ G G V F+ A A+
Sbjct: 9 IKNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAV 61
>Z95327-4|CAI42681.1| 225|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 225
Score = 31.5 bits (68), Expect = 1.8
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +1
Query: 79 RVKNLPPFVSNELLYRSFEIFGKIERAYVKVD-ERGKTLGEGVVEFARKPSALSAIRN 249
RV N+P + E L F G + + D E GK G G E+ + +ALSA+RN
Sbjct: 10 RVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 67
>BC028239-1|AAH28239.1| 616|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa, tau variant
protein.
Length = 616
Score = 30.7 bits (66), Expect = 3.1
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 73 AVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVD-ERGKTLGEGVVEFARKPSALSAIRN 249
+V V N+P + E L F G + + D E GK G G E+ + +ALSA+RN
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
>AY130299-1|AAN05429.1| 616|Homo sapiens tCstF-64 protein.
Length = 616
Score = 30.7 bits (66), Expect = 3.1
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 73 AVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVD-ERGKTLGEGVVEFARKPSALSAIRN 249
+V V N+P + E L F G + + D E GK G G E+ + +ALSA+RN
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
>Z95327-3|CAI42680.1| 577|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 30.3 bits (65), Expect = 4.1
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 73 AVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVD-ERGKTLGEGVVEFARKPSALSAIRN 249
+V V N+P + E L F G + + D E GK G G E+ + +ALSA+RN
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
>Z83819-6|CAB06072.2| 577|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 30.3 bits (65), Expect = 4.1
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 73 AVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVD-ERGKTLGEGVVEFARKPSALSAIRN 249
+V V N+P + E L F G + + D E GK G G E+ + +ALSA+RN
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
>U78525-1|AAC99479.1| 814|Homo sapiens eukaryotic translation
initiation factor protein.
Length = 814
Score = 30.3 bits (65), Expect = 4.1
Identities = 19/73 (26%), Positives = 32/73 (43%)
Frame = +1
Query: 115 LLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAIRNCTKNVSS*HHPYAQS 294
++++ F FGKI + +E GKT G +E+A A+ A++N H + +
Sbjct: 206 VIHKIFSKFGKITNDFYP-EEDGKTKGYIFLEYASPAHAVDAVKNADGYKLDKQHTFRVN 264
Query: 295 LLKALKNLMNSMD 333
L M D
Sbjct: 265 LFTDFDKYMTISD 277
>U62583-1|AAB42010.1| 873|Homo sapiens Prt1 homolog protein.
Length = 873
Score = 30.3 bits (65), Expect = 4.1
Identities = 19/73 (26%), Positives = 32/73 (43%)
Frame = +1
Query: 115 LLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAIRNCTKNVSS*HHPYAQS 294
++++ F FGKI + +E GKT G +E+A A+ A++N H + +
Sbjct: 206 VIHKIFSKFGKITNDFYP-EEDGKTKGYIFLEYASPAHAVDAVKNADGYKLDKQHTFRVN 264
Query: 295 LLKALKNLMNSMD 333
L M D
Sbjct: 265 LFTDFDKYMTISD 277
>M85085-1|AAA35724.1| 577|Homo sapiens cleavage stimulation factor
protein.
Length = 577
Score = 30.3 bits (65), Expect = 4.1
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 73 AVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVD-ERGKTLGEGVVEFARKPSALSAIRN 249
+V V N+P + E L F G + + D E GK G G E+ + +ALSA+RN
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
>DQ351905-1|ABC73063.1| 595|Homo sapiens heterogeneous nuclear
ribonucleoprotein-R2 protein.
Length = 595
Score = 30.3 bits (65), Expect = 4.1
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 7/41 (17%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIER-------AYVKVDERG 183
V+NL V+ E+L +SF FGK+ER A+V ++RG
Sbjct: 307 VRNLATTVTEEILEKSFSEFGKLERVKKLKDYAFVHFEDRG 347
>BX640912-1|CAE45953.1| 613|Homo sapiens hypothetical protein
protein.
Length = 613
Score = 30.3 bits (65), Expect = 4.1
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 7/41 (17%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIER-------AYVKVDERG 183
V+NL V+ E+L +SF FGK+ER A+V ++RG
Sbjct: 325 VRNLATTVTEEILEKSFSEFGKLERVKKLKDYAFVHFEDRG 365
>BT009778-1|AAP88780.1| 577|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 30.3 bits (65), Expect = 4.1
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 73 AVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVD-ERGKTLGEGVVEFARKPSALSAIRN 249
+V V N+P + E L F G + + D E GK G G E+ + +ALSA+RN
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
>BC110865-1|AAI10866.1| 814|Homo sapiens eukaryotic translation
initiation factor 3, subunit B protein.
Length = 814
Score = 30.3 bits (65), Expect = 4.1
Identities = 19/73 (26%), Positives = 32/73 (43%)
Frame = +1
Query: 115 LLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAIRNCTKNVSS*HHPYAQS 294
++++ F FGKI + +E GKT G +E+A A+ A++N H + +
Sbjct: 206 VIHKIFSKFGKITNDFYP-EEDGKTKGYIFLEYASPAHAVDAVKNADGYKLDKQHTFRVN 264
Query: 295 LLKALKNLMNSMD 333
L M D
Sbjct: 265 LFTDFDKYMTISD 277
>BC110389-1|AAI10390.1| 607|Homo sapiens HNRPR protein protein.
Length = 607
Score = 30.3 bits (65), Expect = 4.1
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 7/41 (17%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIER-------AYVKVDERG 183
V+NL V+ E+L +SF FGK+ER A+V ++RG
Sbjct: 319 VRNLATTVTEEILEKSFSEFGKLERVKKLKDYAFVHFEDRG 359
>BC033135-1|AAH33135.1| 559|Homo sapiens Similar to cleavage
stimulation factor, 3' pre-RNA, subunit 2, 64kD protein.
Length = 559
Score = 30.3 bits (65), Expect = 4.1
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 73 AVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVD-ERGKTLGEGVVEFARKPSALSAIRN 249
+V V N+P + E L F G + + D E GK G G E+ + +ALSA+RN
Sbjct: 16 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 75
>BC017712-1|AAH17712.1| 577|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 30.3 bits (65), Expect = 4.1
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 73 AVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVD-ERGKTLGEGVVEFARKPSALSAIRN 249
+V V N+P + E L F G + + D E GK G G E+ + +ALSA+RN
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
>BC009986-1|AAH09986.1| 622|Homo sapiens Unknown (protein for
IMAGE:4124553) protein.
Length = 622
Score = 30.3 bits (65), Expect = 4.1
Identities = 19/73 (26%), Positives = 32/73 (43%)
Frame = +1
Query: 115 LLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAIRNCTKNVSS*HHPYAQS 294
++++ F FGKI + +E GKT G +E+A A+ A++N H + +
Sbjct: 15 VIHKIFSKFGKITNDFYP-EEDGKTKGYIFLEYASPAHAVDAVKNADGYKLDKQHTFRVN 73
Query: 295 LLKALKNLMNSMD 333
L M D
Sbjct: 74 LFTDFDKYMTISD 86
>BC001449-1|AAH01449.1| 636|Homo sapiens HNRPR protein protein.
Length = 636
Score = 30.3 bits (65), Expect = 4.1
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 7/41 (17%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIER-------AYVKVDERG 183
V+NL V+ E+L +SF FGK+ER A+V ++RG
Sbjct: 348 VRNLATTVTEEILEKSFSEFGKLERVKKLKDYAFVHFEDRG 388
>BC001173-1|AAH01173.1| 814|Homo sapiens EIF3S9 protein protein.
Length = 814
Score = 30.3 bits (65), Expect = 4.1
Identities = 19/73 (26%), Positives = 32/73 (43%)
Frame = +1
Query: 115 LLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAIRNCTKNVSS*HHPYAQS 294
++++ F FGKI + +E GKT G +E+A A+ A++N H + +
Sbjct: 206 VIHKIFSKFGKITNDFYP-EEDGKTKGYIFLEYASPAHAVDAVKNADGYKLDKQHTFRVN 264
Query: 295 LLKALKNLMNSMD 333
L M D
Sbjct: 265 LFTDFDKYMTISD 277
>AL109936-4|CAI19027.1| 636|Homo sapiens heterogeneous nuclear
ribonucleoprotein R protein.
Length = 636
Score = 30.3 bits (65), Expect = 4.1
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 7/41 (17%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIER-------AYVKVDERG 183
V+NL V+ E+L +SF FGK+ER A+V ++RG
Sbjct: 348 VRNLATTVTEEILEKSFSEFGKLERVKKLKDYAFVHFEDRG 388
>AL109936-3|CAI19026.1| 633|Homo sapiens heterogeneous nuclear
ribonucleoprotein R protein.
Length = 633
Score = 30.3 bits (65), Expect = 4.1
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 7/41 (17%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIER-------AYVKVDERG 183
V+NL V+ E+L +SF FGK+ER A+V ++RG
Sbjct: 345 VRNLATTVTEEILEKSFSEFGKLERVKKLKDYAFVHFEDRG 385
>AF000364-1|AAC39540.1| 633|Homo sapiens heterogeneous nuclear
ribonucleoprotein R protein.
Length = 633
Score = 30.3 bits (65), Expect = 4.1
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 7/41 (17%)
Frame = +1
Query: 82 VKNLPPFVSNELLYRSFEIFGKIER-------AYVKVDERG 183
V+NL V+ E+L +SF FGK+ER A+V ++RG
Sbjct: 345 VRNLATTVTEEILEKSFSEFGKLERVKKLKDYAFVHFEDRG 385
>AC004971-1|AAP21880.1| 385|Homo sapiens unknown protein.
Length = 385
Score = 30.3 bits (65), Expect = 4.1
Identities = 19/73 (26%), Positives = 32/73 (43%)
Frame = +1
Query: 115 LLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAIRNCTKNVSS*HHPYAQS 294
++++ F FGKI + +E GKT G +E+A A+ A++N H + +
Sbjct: 206 VIHKIFSKFGKITNDFYP-EEDGKTKGYIFLEYASPAHAVDAVKNADGYKLDKQHTFRVN 264
Query: 295 LLKALKNLMNSMD 333
L M D
Sbjct: 265 LFTDFDKYMTISD 277
>M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein.
Length = 707
Score = 29.1 bits (62), Expect = 9.4
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 133 EIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAIRNCTK 258
E+F K V ++ GK+ G +EFA A A+ +C K
Sbjct: 504 EVFEKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNK 545
>BC006516-1|AAH06516.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 29.1 bits (62), Expect = 9.4
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 133 EIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAIRNCTK 258
E+F K V ++ GK+ G +EFA A A+ +C K
Sbjct: 276 EVFEKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNK 317
>BC006494-1|AAH06494.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 29.1 bits (62), Expect = 9.4
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 133 EIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAIRNCTK 258
E+F K V ++ GK+ G +EFA A A+ +C K
Sbjct: 276 EVFEKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNK 317
>BC002343-1|AAH02343.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 29.1 bits (62), Expect = 9.4
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 133 EIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAIRNCTK 258
E+F K V ++ GK+ G +EFA A A+ +C K
Sbjct: 276 EVFEKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNK 317
>AK127608-1|BAC87055.1| 603|Homo sapiens protein ( Homo sapiens
cDNA FLJ45706 fis, clone FEBRA2028457, highly similar
to Nucleolin. ).
Length = 603
Score = 29.1 bits (62), Expect = 9.4
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 133 EIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAIRNCTK 258
E+F K V ++ GK+ G +EFA A A+ +C K
Sbjct: 397 EVFEKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNK 438
>AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens
cDNA FLJ34423 fis, clone HHDPC2008123, highly similar to
NUCLEOLIN. ).
Length = 687
Score = 29.1 bits (62), Expect = 9.4
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 133 EIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAIRNCTK 258
E+F K V ++ GK+ G +EFA A A+ +C K
Sbjct: 481 EVFEKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNK 522
>AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein.
Length = 710
Score = 29.1 bits (62), Expect = 9.4
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 133 EIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSAIRNCTK 258
E+F K V ++ GK+ G +EFA A A+ +C K
Sbjct: 504 EVFEKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNK 545
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,511,381
Number of Sequences: 237096
Number of extensions: 1056718
Number of successful extensions: 2737
Number of sequences better than 10.0: 121
Number of HSP's better than 10.0 without gapping: 2587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2713
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4763295768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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