Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0802X.Seq
         (510 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    25   0.60 
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    23   1.4  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    23   1.4  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    23   1.4  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    23   1.4  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    23   1.4  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    23   1.4  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    23   1.4  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   3.2  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   3.2  

>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 24.6 bits (51), Expect = 0.60
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +1

Query: 331 DILKRIFPRNIQNLRKLVSLDHVSQS*IVSNMNMELDGSNCMNF 462
           + L  +  RN   L   ++L+HV+   + +N+N  +  S C NF
Sbjct: 374 EYLLALSDRNQNVLNNDLNLEHVNFQILGANVNDLIRNSRCANF 417


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = +3

Query: 357 KHPEFTKARELGPRFSELNSFEHEYGTRWKQL 452
           K P+   +     ++S  N++ + Y T +K+L
Sbjct: 77  KEPKIISSLSNNYKYSNYNNYNNNYNTNYKKL 108


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = +3

Query: 357 KHPEFTKARELGPRFSELNSFEHEYGTRWKQL 452
           K P+   +     ++S  N++ + Y T +K+L
Sbjct: 77  KEPKIISSLSNNYKYSNYNNYNNNYNTNYKKL 108


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = +3

Query: 357 KHPEFTKARELGPRFSELNSFEHEYGTRWKQL 452
           K P+   +     ++S  N++ + Y T +K+L
Sbjct: 77  KEPKIISSLSNNYKYSNYNNYNNNYNTNYKKL 108


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = +3

Query: 357 KHPEFTKARELGPRFSELNSFEHEYGTRWKQL 452
           K P+   +     ++S  N++ + Y T +K+L
Sbjct: 77  KEPKIISSLSNNYKYSNYNNYNNNYNTNYKKL 108


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = +3

Query: 357 KHPEFTKARELGPRFSELNSFEHEYGTRWKQL 452
           K P+   +     ++S  N++ + Y T +K+L
Sbjct: 77  KEPKIISSLSNNYKYSNYNNYNNNYNTNYKKL 108


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = +3

Query: 357 KHPEFTKARELGPRFSELNSFEHEYGTRWKQL 452
           K P+   +     ++S  N++ + Y T +K+L
Sbjct: 77  KEPKIISSLSNNYKYSNYNNYNNNYNTNYKKL 108


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = +3

Query: 357 KHPEFTKARELGPRFSELNSFEHEYGTRWKQL 452
           K P+   +     ++S  N++ + Y T +K+L
Sbjct: 77  KEPKIISSLSNNYKYSNYNNYNNNYNTNYKKL 108


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 15/43 (34%), Positives = 18/43 (41%)
 Frame = +3

Query: 282 LRPVIVESFEEPDEFDGYPEKNLPKKHPEFTKARELGPRFSEL 410
           L P  +     PD F   P K LP      TK  + G  FS+L
Sbjct: 653 LLPRPISCHTTPDSFIEAPNKTLPSLPSTLTKNSKQG-LFSKL 694


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -2

Query: 275 CQEETFFVQLRIADKALGLRANSTTPSPRVFPL 177
           C      +Q+ IAD    L  +  +PSP   PL
Sbjct: 857 CPSNMMELQVDIADSQQPLNLSKKSPSPSPRPL 889


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,667
Number of Sequences: 438
Number of extensions: 2199
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)