Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0801X.Seq
         (459 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp. ...    66   3e-10
UniRef50_A0D095 Cluster: Chromosome undetermined scaffold_33, wh...    33   3.9  
UniRef50_Q1IW01 Cluster: Putative uncharacterized protein; n=1; ...    32   5.2  
UniRef50_A5K3U8 Cluster: Putative uncharacterized protein; n=1; ...    32   5.2  
UniRef50_Q5CYC7 Cluster: Uncharacterized protein with predicted ...    32   6.8  
UniRef50_A6CA26 Cluster: Glucokinase; n=1; Planctomyces maris DS...    31   9.0  
UniRef50_Q4P0G6 Cluster: Pre-mRNA-splicing factor CWC21; n=1; Us...    31   9.0  

>UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp.
           SS|Rep: LacZ alpha peptide - Beggiatoa sp. SS
          Length = 73

 Score = 66.5 bits (155), Expect = 3e-10
 Identities = 35/59 (59%), Positives = 36/59 (61%)
 Frame = -3

Query: 457 VITRSVXXXXXXXXXXXXXXXXXXXXXXXAGFPRQALNRGLPLGFRFSALRHLDPKKLD 281
           V+TRSV                       AGFPRQALNRGLPLGFRFSALRHLDPKKLD
Sbjct: 15  VVTRSVTATLASALAPAPFAFFPSFLATFAGFPRQALNRGLPLGFRFSALRHLDPKKLD 73


>UniRef50_A0D095 Cluster: Chromosome undetermined scaffold_33, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_33,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1173

 Score = 32.7 bits (71), Expect = 3.9
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = -2

Query: 155 VYSFDL*GILPISAYWLKNELI*QKFNANFNKILTLTI 42
           +++F L G L    +WLKN+    KF++ F ++L L +
Sbjct: 665 IFNFSLQGALSYIDFWLKNQHFDDKFSSTFTQLLLLAL 702


>UniRef50_Q1IW01 Cluster: Putative uncharacterized protein; n=1;
           Deinococcus geothermalis DSM 11300|Rep: Putative
           uncharacterized protein - Deinococcus geothermalis
           (strain DSM 11300)
          Length = 171

 Score = 32.3 bits (70), Expect = 5.2
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = +3

Query: 168 ECCSSLEQESTIKERGLQRQRAKNRLSGRGPLREPSP*SSFLGSRCRKA 314
           E  SS    S +++R +QR+       G  PL +PS  S  LG  CR+A
Sbjct: 32  EVLSSHSHSSGLQDRPVQRRSESPSRDGLLPLNKPSRESRLLGRACRQA 80


>UniRef50_A5K3U8 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 1167

 Score = 32.3 bits (70), Expect = 5.2
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -2

Query: 446 QRDGYTCQRPGARSSRFLPFLSRHVRRLSPSSSK 345
           +  G++C   G   SRF PFL +H  + S S  K
Sbjct: 393 EEGGFSCHPEGKAKSRFTPFLEQHYGKSSTSEKK 426


>UniRef50_Q5CYC7 Cluster: Uncharacterized protein with predicted
           coiled coil regions; n=2; Cryptosporidium|Rep:
           Uncharacterized protein with predicted coiled coil
           regions - Cryptosporidium parvum Iowa II
          Length = 825

 Score = 31.9 bits (69), Expect = 6.8
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +3

Query: 153 DRDRVECCSSLEQESTIKERGLQRQRAKNRL 245
           +RD V  C S+ Q+S IKER L+ ++ K +L
Sbjct: 128 ERDNVSKCLSIRQQSLIKERELRLEKTKLKL 158


>UniRef50_A6CA26 Cluster: Glucokinase; n=1; Planctomyces maris DSM
           8797|Rep: Glucokinase - Planctomyces maris DSM 8797
          Length = 342

 Score = 31.5 bits (68), Expect = 9.0
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +1

Query: 175 VPVWNKSPLLKNVDSNVKGRKTVYQGEAH 261
           +P W   P+ + V  +  G+KT+YQ +A+
Sbjct: 95  LPTWKDFPIRQTVSDHYSGKKTIYQNDAN 123


>UniRef50_Q4P0G6 Cluster: Pre-mRNA-splicing factor CWC21; n=1;
           Ustilago maydis|Rep: Pre-mRNA-splicing factor CWC21 -
           Ustilago maydis (Smut fungus)
          Length = 348

 Score = 31.5 bits (68), Expect = 9.0
 Identities = 20/63 (31%), Positives = 27/63 (42%)
 Frame = +3

Query: 156 RDRVECCSSLEQESTIKERGLQRQRAKNRLSGRGPLREPSP*SSFLGSRCRKALNRNPKG 335
           R R     S    S  + R   R R+++ LS     R  SP  S   SRC  + +R+P  
Sbjct: 266 RSRSPLSHSRSSRSRSRSRSRSRSRSRSPLSHSRSSRSRSPSRSRSPSRCASSRSRSPAH 325

Query: 336 SPR 344
            PR
Sbjct: 326 RPR 328


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 411,275,262
Number of Sequences: 1657284
Number of extensions: 8178059
Number of successful extensions: 17094
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17088
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24351434270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)