Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0801X.Seq
         (459 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0244 - 27130502-27130843,27130914-27131019,27132170-27132411     30   1.0  
11_05_0017 - 18416977-18417936                                         27   7.3  
08_02_0922 + 22646822-22647742                                         27   9.6  

>02_05_0244 - 27130502-27130843,27130914-27131019,27132170-27132411
          Length = 229

 Score = 29.9 bits (64), Expect = 1.0
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -2

Query: 422 RPGARSSRFLPFLSRHVRRLSPSSSKSGAP 333
           R  A   R+ PFLSR  +R S  S+ SG P
Sbjct: 191 RRSATDGRYAPFLSRQPQRSSAGSTHSGKP 220


>11_05_0017 - 18416977-18417936
          Length = 319

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -3

Query: 277 GDGSRSGPRPDRRFFAL*RWSP 212
           G   R GP   RRFF   RW+P
Sbjct: 275 GVARRPGPTQGRRFFGCGRWTP 296


>08_02_0922 + 22646822-22647742
          Length = 306

 Score = 26.6 bits (56), Expect = 9.6
 Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = +3

Query: 186 EQESTIKERGLQRQR-AKNRLSGRGPLREPSP 278
           E+E++ KE+  + Q+ AK +L GRG    PSP
Sbjct: 215 EEETSRKEKRPEGQKKAKAKLKGRGKNAAPSP 246


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,853,517
Number of Sequences: 37544
Number of extensions: 214626
Number of successful extensions: 468
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 468
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 907440304
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)