Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0800.Seq
         (724 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...   113   2e-27
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...   113   2e-27
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...   103   1e-24
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    23   1.9  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.5  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   3.3  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score =  113 bits (271), Expect = 2e-27
 Identities = 53/60 (88%), Positives = 56/60 (93%)
 Frame = +1

Query: 328 INEPTAAAIAYGLDKKGTGERNVLIFXLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGED 507
           INEPTAAAIAYGLDKK   ERNVLIF LGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGED
Sbjct: 1   INEPTAAAIAYGLDKKAEKERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGED 60



 Score =  110 bits (265), Expect = 1e-26
 Identities = 51/71 (71%), Positives = 63/71 (88%)
 Frame = +3

Query: 510 DNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDF 689
           DNR+V +  Q+FK+K+K D++ N RALRRLRT CERAKRTLSS+TQASIEIDSLF+GID+
Sbjct: 62  DNRLVEYCTQDFKKKHKADISGNPRALRRLRTQCERAKRTLSSATQASIEIDSLFDGIDY 121

Query: 690 YTSITRARFEE 722
            T+ITRARFE+
Sbjct: 122 STTITRARFED 132


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score =  113 bits (271), Expect = 2e-27
 Identities = 53/60 (88%), Positives = 56/60 (93%)
 Frame = +1

Query: 328 INEPTAAAIAYGLDKKGTGERNVLIFXLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGED 507
           INEPTAAAIAYGLDKK   ERNVLIF LGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGED
Sbjct: 1   INEPTAAAIAYGLDKKAERERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGED 60



 Score =  110 bits (265), Expect = 1e-26
 Identities = 51/71 (71%), Positives = 63/71 (88%)
 Frame = +3

Query: 510 DNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDF 689
           DNR+V +  Q+FK+K+K D++ N RALRRLRT CERAKRTLSS+TQASIEIDSLF+GID+
Sbjct: 62  DNRLVEYCTQDFKKKHKADISGNPRALRRLRTQCERAKRTLSSATQASIEIDSLFDGIDY 121

Query: 690 YTSITRARFEE 722
            T+ITRARFE+
Sbjct: 122 STTITRARFED 132


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score =  103 bits (247), Expect = 1e-24
 Identities = 47/60 (78%), Positives = 56/60 (93%)
 Frame = +1

Query: 328 INEPTAAAIAYGLDKKGTGERNVLIFXLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGED 507
           INEPTAAAIAYGLDKKG  E+N+L++ LGGGTFDVSILTI++G+FEV +T+GDTHLGGED
Sbjct: 1   INEPTAAAIAYGLDKKGA-EQNILVYDLGGGTFDVSILTIDNGVFEVVATSGDTHLGGED 59



 Score = 67.7 bits (158), Expect = 9e-14
 Identities = 29/71 (40%), Positives = 52/71 (73%)
 Frame = +3

Query: 510 DNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDF 689
           D +++++F++  K+K+KKD+  +K+AL++LR   E+AKR LSS  + ++ I++L    DF
Sbjct: 61  DQKVMDYFIKMVKQKHKKDIRADKKALQKLRREVEKAKRDLSSVHKTTLTIENLLADYDF 120

Query: 690 YTSITRARFEE 722
             ++TRA+FEE
Sbjct: 121 SETLTRAKFEE 131


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 211 LSRQNCAECSYHGSRYFNDSQR 276
           LS QN    S HG RY ++ ++
Sbjct: 429 LSEQNIQSTSIHGDRYQSEREK 450


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +2

Query: 101 DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKT 226
           D  KPKI+   + ED+    E+       K K T +  L KT
Sbjct: 241 DKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELNKT 282


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 283 TKDAGTISGLNVLRIINEPTAA 348
           TKDAG +S   +  ++N+P  A
Sbjct: 330 TKDAGLLSYPEICTLLNDPQNA 351


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,519
Number of Sequences: 336
Number of extensions: 3726
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)