Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0800.Seq
(724 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 158 5e-39
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 157 1e-38
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 155 3e-38
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 142 3e-34
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 94 9e-20
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 1e-12
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 4e-10
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 56 3e-08
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 50 2e-06
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-06
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.95
SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.95
SB_24762| Best HMM Match : Astacin (HMM E-Value=0) 30 1.7
SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08) 30 2.2
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5) 29 2.9
SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06) 29 3.8
SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0) 29 5.0
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_56988| Best HMM Match : DUF229 (HMM E-Value=2e-06) 28 6.7
SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3) 28 6.7
SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05) 28 6.7
SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6) 28 6.7
SB_4173| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 28 8.8
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 158 bits (383), Expect = 5e-39
Identities = 76/84 (90%), Positives = 80/84 (95%)
Frame = +1
Query: 256 YFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFXLGGGTFDVS 435
YF+DSQRQATKDAGTI+GLNVLRIINEPTAAAIAYGLDKK ERNVLI+ LGGGTFDVS
Sbjct: 149 YFHDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIYDLGGGTFDVS 208
Query: 436 ILTIEDGIFEVKSTAGDTHLGGED 507
+LTIEDGIFEVKSTAGDTHLGGED
Sbjct: 209 VLTIEDGIFEVKSTAGDTHLGGED 232
Score = 134 bits (323), Expect = 9e-32
Identities = 62/71 (87%), Positives = 69/71 (97%)
Frame = +3
Query: 510 DNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDF 689
DN+MV+HFV++FK+KYKKD+ NKRA+RRLRTACERAKRTLSSSTQASIEIDSLFEGIDF
Sbjct: 234 DNKMVDHFVKQFKQKYKKDITPNKRAMRRLRTACERAKRTLSSSTQASIEIDSLFEGIDF 293
Query: 690 YTSITRARFEE 722
YTSITRARFEE
Sbjct: 294 YTSITRARFEE 304
Score = 133 bits (321), Expect = 2e-31
Identities = 59/83 (71%), Positives = 70/83 (84%)
Frame = +2
Query: 5 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVL 184
NT+FDAKRLIGRKF+D V DM HWPF V+ +G +PKI+V +KGE K+FFPEE+SSMVL
Sbjct: 65 NTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSMVL 124
Query: 185 TKMKETAEAYLGKTVQNAVITVP 253
TKMKETAEAYLG V +AV+TVP
Sbjct: 125 TKMKETAEAYLGAKVTDAVVTVP 147
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 157 bits (380), Expect = 1e-38
Identities = 76/84 (90%), Positives = 78/84 (92%)
Frame = +1
Query: 256 YFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFXLGGGTFDVS 435
YFNDSQRQATKDAG ISGLNVLRIINEPTAAAIAYGLDKK ERNVLIF LGGGTFDVS
Sbjct: 242 YFNDSQRQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKVGQERNVLIFDLGGGTFDVS 301
Query: 436 ILTIEDGIFEVKSTAGDTHLGGED 507
+L+IEDGIFEVKST GDTHLGGED
Sbjct: 302 VLSIEDGIFEVKSTHGDTHLGGED 325
Score = 128 bits (308), Expect = 6e-30
Identities = 60/71 (84%), Positives = 67/71 (94%)
Frame = +3
Query: 510 DNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDF 689
DN MV+ FV++FK+KYKKD+ NKRALRRLRTACERAKRTLSSSTQASIEIDSL++GIDF
Sbjct: 327 DNNMVDFFVKQFKQKYKKDITPNKRALRRLRTACERAKRTLSSSTQASIEIDSLYDGIDF 386
Query: 690 YTSITRARFEE 722
YTSITRARFEE
Sbjct: 387 YTSITRARFEE 397
Score = 110 bits (264), Expect = 1e-24
Identities = 62/108 (57%), Positives = 71/108 (65%), Gaps = 25/108 (23%)
Frame = +2
Query: 5 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEV----- 169
NTIFDAKRLIGR+F+D V+ DMKHW FEVV++ G+PK+KV YKGE KTFF EEV
Sbjct: 65 NTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVNEAG 124
Query: 170 --------------------SSMVLTKMKETAEAYLGKTVQNAVITVP 253
SSMVL KMKETAEAYLG V +AV+TVP
Sbjct: 125 RPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVP 172
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +2
Query: 164 EVSSMVLTKMKETAEAYLGKTVQNAVITVP 253
++SSMVL KMKETAEAYLG V +AV+TVP
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVP 240
Score = 33.9 bits (74), Expect = 0.13
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 256 YFNDSQRQATKDAG 297
YFNDSQRQATKDAG
Sbjct: 174 YFNDSQRQATKDAG 187
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 155 bits (376), Expect = 3e-38
Identities = 74/85 (87%), Positives = 81/85 (95%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 YFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFXLGGGTFDVS 435
YFNDSQRQATKDAGTI+GLNVLR+INEPTAAA+AYGLDK +GE+NVLIF LGGGTFDVS
Sbjct: 149 YFNDSQRQATKDAGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVLIFDLGGGTFDVS 208
Query: 436 ILTIEDG-IFEVKSTAGDTHLGGED 507
ILTI+DG +FEVKSTAGDTHLGGED
Sbjct: 209 ILTIDDGSLFEVKSTAGDTHLGGED 233
Score = 134 bits (324), Expect = 7e-32
Identities = 62/83 (74%), Positives = 73/83 (87%)
Frame = +2
Query: 5 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVL 184
NTIFDAKRLIGR+++DATVQ+DMK WPF+++SD KPKI+V YKGE KTF EE+SSMVL
Sbjct: 65 NTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSMVL 124
Query: 185 TKMKETAEAYLGKTVQNAVITVP 253
KMKETAEAYLG+ V +AVITVP
Sbjct: 125 GKMKETAEAYLGQKVTSAVITVP 147
Score = 130 bits (314), Expect = 1e-30
Identities = 59/71 (83%), Positives = 67/71 (94%)
Frame = +3
Query: 510 DNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDF 689
DNR+VNHFV EFKRKYKKD++ N RA+RRLRTACERAKRTLSSST+ASIE+DSLFEGIDF
Sbjct: 235 DNRLVNHFVAEFKRKYKKDMSKNSRAMRRLRTACERAKRTLSSSTEASIEVDSLFEGIDF 294
Query: 690 YTSITRARFEE 722
YT I+RARFE+
Sbjct: 295 YTKISRARFED 305
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 142 bits (344), Expect = 3e-34
Identities = 65/84 (77%), Positives = 77/84 (91%)
Frame = +1
Query: 256 YFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFXLGGGTFDVS 435
YFND+QRQATKDAG I+GL V+RIINEPTAAAIAYG+DKK GE+N+L+F LGGGTFDVS
Sbjct: 847 YFNDAQRQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKK-EGEKNILVFDLGGGTFDVS 905
Query: 436 ILTIEDGIFEVKSTAGDTHLGGED 507
+LTI++G+FEV +T GDTHLGGED
Sbjct: 906 LLTIDNGVFEVVATNGDTHLGGED 929
Score = 112 bits (270), Expect = 2e-25
Identities = 53/83 (63%), Positives = 66/83 (79%)
Frame = +2
Query: 5 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVL 184
NT+FDAKRLIGR ++D +VQ D+K +PF+VV KP ++V K E KTF EE+S+MVL
Sbjct: 763 NTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAMVL 822
Query: 185 TKMKETAEAYLGKTVQNAVITVP 253
TKMKETAEAYLGK V +AV+TVP
Sbjct: 823 TKMKETAEAYLGKKVTHAVVTVP 845
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/71 (46%), Positives = 50/71 (70%)
Frame = +3
Query: 510 DNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDF 689
D ++ HF++ +K+K K++ + RA+++LR E+AKR LS+ QA +EI+S FEG DF
Sbjct: 931 DQNVMEHFIKLYKKKKGKNIRKDNRAVQKLRREVEKAKRALSTQHQARVEIESFFEGEDF 990
Query: 690 YTSITRARFEE 722
+TRARFEE
Sbjct: 991 SEMLTRARFEE 1001
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 94.3 bits (224), Expect = 9e-20
Identities = 45/83 (54%), Positives = 60/83 (72%)
Frame = +1
Query: 259 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFXLGGGTFDVSI 438
F+ QR AT A +++G+ VLR+INEPTAAA+AYGL KK G NV++ LGGGT DVS+
Sbjct: 180 FDIKQRNATVKAASLAGITVLRVINEPTAAALAYGLHKK-EGVANVMVVDLGGGTLDVSL 238
Query: 439 LTIEDGIFEVKSTAGDTHLGGED 507
L I+ G+F + AG+ LGG+D
Sbjct: 239 LNIQGGMFVTMAMAGNNRLGGQD 261
Score = 54.4 bits (125), Expect = 9e-08
Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +2
Query: 5 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDG-GKPKIKVAYKGEDKTFFPEEVSSMV 181
NTI+DAKR IG+ F + K + F V +D G V KG PEE+ V
Sbjct: 94 NTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGGYV 153
Query: 182 LTKMKETAEAYLGKTVQNAVITVP 253
+ K++ AE L TV AV++VP
Sbjct: 154 IKKLRTMAERNLTTTVTKAVMSVP 177
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 70.9 bits (166), Expect = 1e-12
Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Frame = +2
Query: 5 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSSMV 181
NTI KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V +M+
Sbjct: 121 NTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVMAML 180
Query: 182 LTKMKETAEAYLGKTVQNAVITVP 253
T++K TAE L V + VI+VP
Sbjct: 181 FTRLKTTAEIALKTKVTDCVISVP 204
Score = 62.9 bits (146), Expect = 3e-10
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Frame = +1
Query: 232 ECSYHGSRYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKG---TGERNVLI 402
+C Y+ D QR+ DA +GLN LR++N+ TA ++AYG+ K+ RNV+
Sbjct: 198 DCVISVPSYYTDRQRRCMLDASATAGLNCLRLMNDTTAVSLAYGIYKQDLPTDKPRNVVF 257
Query: 403 FXLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGED 507
+G + V I G +V STA + +LGG D
Sbjct: 258 VDIGHSSLQVCITAFLKGQLKVLSTAVEPNLGGRD 292
Score = 54.8 bits (126), Expect = 7e-08
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Frame = +3
Query: 510 DNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSST-QASIEIDSLFEGID 686
D +V HF QEFK KYK D+ ++ +A +L CE+ K+ +S++T + I I+ E D
Sbjct: 294 DYVLVEHFAQEFKTKYKIDVHSSIKAKIKLGAECEKLKKLMSANTSEIPINIECFMEDKD 353
Query: 687 FYTSITRARFEE 722
+ + RA+FEE
Sbjct: 354 VHGRMKRAQFEE 365
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 62.1 bits (144), Expect = 4e-10
Identities = 25/38 (65%), Positives = 33/38 (86%)
Frame = +1
Query: 394 VLIFXLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGED 507
+ ++ LGGGTFD+SIL I+ G+FEVK+T GDT+LGGED
Sbjct: 2 IAVYDLGGGTFDISILEIQKGVFEVKATNGDTYLGGED 39
Score = 45.6 bits (103), Expect = 4e-05
Identities = 22/51 (43%), Positives = 32/51 (62%)
Frame = +3
Query: 510 DNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEI 662
DN ++ + EFK++ DL+ + AL+RLR A E+AK LSSS Q I +
Sbjct: 41 DNTLLKFLIAEFKKESGVDLSKDSMALQRLREAAEKAKIELSSSVQTDINL 91
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 56.0 bits (129), Expect = 3e-08
Identities = 39/72 (54%), Positives = 43/72 (59%), Gaps = 26/72 (36%)
Frame = +1
Query: 256 YFNDSQRQATKDAGTISGLNVL------------------------RIINEPTAAAIAYG 363
+FND+QRQATKDAGTI+GL+VL RIINEPTAAAIAYG
Sbjct: 48 HFNDAQRQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYG 107
Query: 364 LDKK--GTGERN 393
LDK G ERN
Sbjct: 108 LDKARGGKAERN 119
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/45 (51%), Positives = 34/45 (75%)
Frame = +2
Query: 119 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 253
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVP
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVP 46
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 5/71 (7%)
Frame = +3
Query: 510 DNRMVNHFVQEFKR-----KYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLF 674
D +++ +FKR K+K D TNKR+ +L+T+ E+ K LS+ A+ +DSL
Sbjct: 195 DEVLLDLLANDFKRQVLLWKWKIDPLTNKRSKTKLQTSAEQCKNILSTLESANCSVDSLC 254
Query: 675 EGIDFYTSITR 707
EGIDF ++R
Sbjct: 255 EGIDFQGQVSR 265
Score = 37.5 bits (83), Expect = 0.011
Identities = 15/41 (36%), Positives = 29/41 (70%)
Frame = +1
Query: 385 ERNVLIFXLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGED 507
+ VL++ LGG + DV++L++ +G+++V +T D LGG +
Sbjct: 153 DSTVLVYRLGGASHDVTLLSVINGMYKVLATEYDGALGGRN 193
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Frame = +3
Query: 510 DNRMVNHFVQEFKR--KYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGI 683
D R+ +H VQ FK+ K+K ++ + RA+ + R K+ LS++ + +I+ +F+G
Sbjct: 216 DMRLRDHLVQLFKKNYKFKGEVTQSSRAMAKFYKEALRVKQVLSANNEIFAQIEGVFDGK 275
Query: 684 DFYTSITRARFEE 722
DF +TR EE
Sbjct: 276 DFRVKVTREELEE 288
Score = 41.5 bits (93), Expect = 7e-04
Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Frame = +1
Query: 256 YFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK----GTGERNVLIFXLGGGT 423
+FN ++R+A A + GLNVL+I+N TA A+ YGL ++ T E++ + + +G +
Sbjct: 115 FFNQAERRALLRAAELVGLNVLQIMNSNTAVALNYGLFQQKSFNDTLEKHFMFYDMGASS 174
Query: 424 FDVSIL 441
+I+
Sbjct: 175 TVATIV 180
Score = 34.3 bits (75), Expect = 0.10
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +2
Query: 113 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 253
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVP 113
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 31.1 bits (67), Expect = 0.95
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 407 TSAAVPSTCPSLPSRMVSSR*NPPPATPTWEVRT*QSHGEPLCPGV 544
T A P P++PSR +R PPP P + + P+ PG+
Sbjct: 784 TKPATPRVPPNIPSRPPGARPTPPPPPPGKPTKPTKPSLPPVPPGI 829
>SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 31.1 bits (67), Expect = 0.95
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 530 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGK 622
LCP ++ + GP +++E AFA C+ GK
Sbjct: 169 LCPSPEQNGEPGPMFEREGGDAFANCVARGK 199
>SB_24762| Best HMM Match : Astacin (HMM E-Value=0)
Length = 733
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -1
Query: 295 LHLLWLVFESH*STGNRDNCILHSFAEIS 209
++ LWL F + S+ + D C+LHS A ++
Sbjct: 415 IYTLWLDFSRYYSSASSDICVLHSIAHLA 443
>SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08)
Length = 1011
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +2
Query: 110 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPGTSMTLKDKPQK 289
+PK K + E+ EE +M ++K LGK V+ + T ++TL + Q
Sbjct: 654 QPKFKKTKEEEEFDKLLEEADAMTQQEVKNVKNIKLGKNVKTQLYTCEPCNITLNSQKQM 713
Query: 290 MQ 295
Q
Sbjct: 714 SQ 715
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +1
Query: 343 AAAIAYGLDKKGTGERNVLIFXLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDLT 513
A A L +G E + G GT VS + +E+G +++ D H+ G T
Sbjct: 1505 AGAGGLSLAIEGPSEAKLTCQDNGDGTCSVSYIPVEEGDYDIHIKFADEHIPGSPFT 1561
>SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 521 GEPLCPGVQEEIQKGPRYQQESS*AFAYCM 610
G LCP ++ + GP +++E S AFA C+
Sbjct: 218 GYKLCPLPEQNGEPGPMFEREGSDAFANCV 247
>SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5)
Length = 452
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 530 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGK 622
LCP ++ GP +++E S AFA C+ GK
Sbjct: 206 LCPLPEQNGGPGPMFEREGSDAFANCVTRGK 236
>SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06)
Length = 799
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 491 WVSPAVDFTSKIPSSMVRMDTSKVPPPRXKISTFRSPVP 375
+++PA+ S +PS V +D VP P I+ + VP
Sbjct: 267 YLTPAISTQSTLPSGTVTLDQHNVPHPSGTITLDQHNVP 305
>SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1488
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 157 PRGSQFHGAYENEGNCRSLSRQNCAECSYHGSRYFN 264
PRG Q Y G+C S+S++NC + S+ + +N
Sbjct: 1142 PRGKQI--PYGTAGDCYSVSQENCRKGSFKVTYQYN 1175
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 28.7 bits (61), Expect = 5.0
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = -2
Query: 207 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSNLRPMR 28
S F+F ST + +S +KV+ SPL + + P+ G S C V NL
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNV--QNLSRCP 1165
Query: 27 RLASNIVL 4
++++ VL
Sbjct: 1166 KISNATVL 1173
>SB_56988| Best HMM Match : DUF229 (HMM E-Value=2e-06)
Length = 286
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +3
Query: 213 ISAKLCRM-QLSRFP-VLQ*LSKTSHKRCRYHLRLERSPNH 329
+SAKLC + LS+ LQ S ++C Y +++E SP H
Sbjct: 198 LSAKLCHVVTLSKIVRALQTHSHLHKRQCSYQIQIETSPAH 238
>SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3)
Length = 439
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 530 LCPGVQEEIQKGPRYQQESS*AFAYCM 610
LCP ++ + GP +++E S AFA C+
Sbjct: 107 LCPLPEQNGEPGPMFEREGSDAFANCV 133
>SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05)
Length = 1312
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -2
Query: 468 HLEDTILDGKDGHVEGTAAEVKDKYISFSSTLFVKTVSNRSSSG 337
H+EDT DG DG E +E K + S SN+ G
Sbjct: 486 HIEDTTWDGSDGQREAGFSEQKAERSSSGGNRTTHGASNKPRDG 529
>SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6)
Length = 533
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 530 LCPGVQEEIQKGPRYQQESS*AFAYCM 610
LCP ++ + GP +++E S AFA C+
Sbjct: 74 LCPLPEQNGEPGPMFEREGSDAFANCV 100
>SB_4173| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 743
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +3
Query: 213 ISAKLCRM-QLSRFP-VLQ*LSKTSHKRCRYHLRLERSPNH 329
+SAKLC + LS+ LQ S ++C Y +++E SP H
Sbjct: 655 LSAKLCHVITLSKIVRALQTHSHLHKRQCSYQIQIETSPAH 695
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +1
Query: 394 VLIFXLGGGTFDVSILTIEDGIFEVK 471
V I+ LG GT++++IL E G++ ++
Sbjct: 319 VPIYDLGNGTYEMAILFHEPGVYSIR 344
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,886,654
Number of Sequences: 59808
Number of extensions: 522684
Number of successful extensions: 1892
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1883
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1925890720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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