Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0799.Seq
         (711 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    24   1.1  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    24   1.1  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          24   1.4  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   5.7  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   5.7  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   7.5  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
 Frame = -1

Query: 90  SYFKLHVLRLR----SLTPVTYLCKLLGIHSL 7
           SYF  H   L     S+ PV  +CKL+G+++L
Sbjct: 9   SYFTTHHDTLHNIYTSMKPVYAICKLIGLNTL 40


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
 Frame = -1

Query: 90  SYFKLHVLRLR----SLTPVTYLCKLLGIHSL 7
           SYF  H   L     S+ PV  +CKL+G+++L
Sbjct: 9   SYFTTHHDTLHNIYTSMKPVYAICKLIGLNTL 40


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
 Frame = +2

Query: 68  STCNLKYDENIYSMFQPISIFHHHTPRXXMHQEG*YRQYRTDQ--PPGFNIVITHAKDDR 241
           S C L +DE  YS F+  ++   +     + ++  Y  Y  +Q  PP     IT+   D 
Sbjct: 1   SQCKLHFDEMSYSQFENQAVLQSYN---FLQEKTTYEYYENNQALPP-----ITYPPSDW 52

Query: 242 TC 247
            C
Sbjct: 53  NC 54


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 427 YYFPQHYRALFLRFR*C 377
           YY+P  YR +  R R C
Sbjct: 156 YYWPNMYRTIKKRLRSC 172


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = -2

Query: 353 YLPCWRTSP 327
           Y+PCW  +P
Sbjct: 382 YIPCWNATP 390


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 6/13 (46%), Positives = 13/13 (100%)
 Frame = +1

Query: 91  REYLQHVPADQHI 129
           +EYL+++P+D++I
Sbjct: 430 KEYLENLPSDKYI 442


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,414
Number of Sequences: 336
Number of extensions: 3801
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)