Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0799.Seq
         (711 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.                  31   3.1  
M74027-1|AAA59875.1|  573|Homo sapiens mucin protein.                  31   3.1  
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.                  31   3.1  
BC028026-1|AAH28026.1|   96|Homo sapiens PCGF3 protein protein.        31   4.1  
Z34281-1|CAA84035.1|   62|Homo sapiens mucin protein.                  30   7.1  
DQ438879-1|ABE66436.1|  350|Homo sapiens GLIS family zinc finger...    30   7.1  
DQ438878-1|ABE66435.1|  438|Homo sapiens GLIS family zinc finger...    30   7.1  
DQ438877-1|ABE66434.1|  930|Homo sapiens GLIS family zinc finger...    30   7.1  
BC033899-1|AAH33899.2|  775|Homo sapiens GLIS family zinc finger...    30   7.1  
AL158012-1|CAH70655.1|  775|Homo sapiens GLIS family zinc finger...    30   7.1  
AL137071-1|CAI39818.1|  775|Homo sapiens GLIS family zinc finger...    30   7.1  
AL133283-1|CAH72449.1|  775|Homo sapiens GLIS family zinc finger...    30   7.1  
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.              30   7.1  
AF226728-1|AAF35887.1| 1548|Homo sapiens somatostatin receptor-i...    30   7.1  
AF163302-1|AAD45121.1| 2161|Homo sapiens somatostatin receptor i...    30   7.1  
AB209404-1|BAD92641.1|  370|Homo sapiens GLIS family zinc finger...    30   7.1  

>M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.
          Length = 1270

 Score = 31.5 bits (68), Expect = 3.1
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +1

Query: 565  PPLFLTTSSQVTIPSSSMVAITTIATVDSSTPRDLLKSSPAAPATKTPS 711
            PP  +TT S  T PS     +TT+    +S+P   L ++P  P+   P+
Sbjct: 1099 PPTTMTTPSPTTTPSPPTTTMTTLPPTTTSSP---LTTTPLPPSITPPT 1144



 Score = 30.3 bits (65), Expect = 7.1
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +1

Query: 565  PPLFLTTSSQVTIPSSSMVAITTIATVDSSTPRDLLKSSPAAPATKTP 708
            P   +TT S  T PSS +   TT ++  + +P     ++P+   T +P
Sbjct: 1067 PTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTTTPSP 1114


>M74027-1|AAA59875.1|  573|Homo sapiens mucin protein.
          Length = 573

 Score = 31.5 bits (68), Expect = 3.1
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +1

Query: 565 PPLFLTTSSQVTIPSSSMVAITTIATVDSSTPRDLLKSSPAAPATKTPS 711
           PP  +TT S  T PS     +TT+    +S+P   L ++P  P+   P+
Sbjct: 382 PPTTMTTPSPTTTPSPPTTTMTTLPPTTTSSP---LTTTPLPPSITPPT 427



 Score = 30.3 bits (65), Expect = 7.1
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +1

Query: 565 PPLFLTTSSQVTIPSSSMVAITTIATVDSSTPRDLLKSSPAAPATKTP 708
           P   +TT S  T PSS +   TT ++  + +P     ++P+   T +P
Sbjct: 350 PTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTTTPSP 397


>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
          Length = 5179

 Score = 31.5 bits (68), Expect = 3.1
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +1

Query: 565  PPLFLTTSSQVTIPSSSMVAITTIATVDSSTPRDLLKSSPAAPATKTPS 711
            PP  +TT S  T PS     +TT+    +S+P   L ++P  P+   P+
Sbjct: 1724 PPTTMTTPSPTTTPSPPTTTMTTLPPTTTSSP---LTTTPLPPSITPPT 1769



 Score = 30.3 bits (65), Expect = 7.1
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +1

Query: 565  PPLFLTTSSQVTIPSSSMVAITTIATVDSSTPRDLLKSSPAAPATKTP 708
            P   +TT S  T PSS +   TT ++  + +P     ++P+   T +P
Sbjct: 1692 PTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTTTPSP 1739


>BC028026-1|AAH28026.1|   96|Homo sapiens PCGF3 protein protein.
          Length = 96

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -3

Query: 667 SLWGLMNPPWQSLLWQPCCCWVSLPGK 587
           +LWG ++P W  + W P  C  + PG+
Sbjct: 5   TLWGHLSPAWVLVPWTPRACGQAAPGR 31


>Z34281-1|CAA84035.1|   62|Homo sapiens mucin protein.
          Length = 62

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = +1

Query: 568 PLFLTTSSQVTIPSSSMVAITTIA--TVDSSTPRDLLKSSPAAPATKTPS 711
           P   TTSS  T  +S+    TT A  T  +STP+  + S+P +  T  P+
Sbjct: 3   PQTSTTSSPTTSTTSAPTTSTTSAPTTSTTSTPQTSISSAPTSSTTSAPT 52


>DQ438879-1|ABE66436.1|  350|Homo sapiens GLIS family zinc finger 3
           transcript variant TE1 protein.
          Length = 350

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 127 IPPPHAEAXYAPGRLISSVPHRPTTRI 207
           +PPPH  +  +PG  +   PH P++++
Sbjct: 241 VPPPHPVSHPSPGHNVQGSPHNPSSQL 267


>DQ438878-1|ABE66435.1|  438|Homo sapiens GLIS family zinc finger 3
           transcript variant TS1 protein.
          Length = 438

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 127 IPPPHAEAXYAPGRLISSVPHRPTTRI 207
           +PPPH  +  +PG  +   PH P++++
Sbjct: 236 VPPPHPVSHPSPGHNVQGSPHNPSSQL 262


>DQ438877-1|ABE66434.1|  930|Homo sapiens GLIS family zinc finger 3
           transcript variant long T1 protein.
          Length = 930

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 127 IPPPHAEAXYAPGRLISSVPHRPTTRI 207
           +PPPH  +  +PG  +   PH P++++
Sbjct: 728 VPPPHPVSHPSPGHNVQGSPHNPSSQL 754


>BC033899-1|AAH33899.2|  775|Homo sapiens GLIS family zinc finger 3
           protein.
          Length = 775

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 127 IPPPHAEAXYAPGRLISSVPHRPTTRI 207
           +PPPH  +  +PG  +   PH P++++
Sbjct: 573 VPPPHPVSHPSPGHNVQGSPHNPSSQL 599


>AL158012-1|CAH70655.1|  775|Homo sapiens GLIS family zinc finger 3
           protein.
          Length = 775

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 127 IPPPHAEAXYAPGRLISSVPHRPTTRI 207
           +PPPH  +  +PG  +   PH P++++
Sbjct: 573 VPPPHPVSHPSPGHNVQGSPHNPSSQL 599


>AL137071-1|CAI39818.1|  775|Homo sapiens GLIS family zinc finger 3
           protein.
          Length = 775

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 127 IPPPHAEAXYAPGRLISSVPHRPTTRI 207
           +PPPH  +  +PG  +   PH P++++
Sbjct: 573 VPPPHPVSHPSPGHNVQGSPHNPSSQL 599


>AL133283-1|CAH72449.1|  775|Homo sapiens GLIS family zinc finger 3
           protein.
          Length = 775

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 127 IPPPHAEAXYAPGRLISSVPHRPTTRI 207
           +PPPH  +  +PG  +   PH P++++
Sbjct: 573 VPPPHPVSHPSPGHNVQGSPHNPSSQL 599


>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
          Length = 1349

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = +1

Query: 568 PLFLTTSSQVTIPSSSMVAITTIA--TVDSSTPRDLLKSSPAAPATKTPS 711
           P   TTSS  T  +S+    TT A  T  +STP+  + S+P +  T  P+
Sbjct: 795 PQTSTTSSPTTSTTSAPTTSTTSAPTTSTTSTPQTSISSAPTSSTTSAPT 844


>AF226728-1|AAF35887.1| 1548|Homo sapiens somatostatin
            receptor-interacting protein splice variant b protein.
          Length = 1548

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = +1

Query: 529  PIIPPYQIKVFQPPLFLTTSSQVTIPSSSMVAITTIATVDSSTPRDLLKSSPAAPATKTP 708
            P +PP  +    PP   +T+S +T   S +  +T  A+     P      +PAAPA   P
Sbjct: 990  PPVPPPAVAA-APPTLDSTASSLTSYDSEVATLTQGASAAPGDPHPPGPPAPAAPAPAAP 1048


>AF163302-1|AAD45121.1| 2161|Homo sapiens somatostatin receptor
            interacting protein splice variant a protein.
          Length = 2161

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = +1

Query: 529  PIIPPYQIKVFQPPLFLTTSSQVTIPSSSMVAITTIATVDSSTPRDLLKSSPAAPATKTP 708
            P +PP  +    PP   +T+S +T   S +  +T  A+     P      +PAAPA   P
Sbjct: 1603 PPVPPPAVAA-APPTLDSTASSLTSYDSEVATLTQGASAAPGDPHPPGPPAPAAPAPAAP 1661


>AB209404-1|BAD92641.1|  370|Homo sapiens GLIS family zinc finger 3
           variant protein.
          Length = 370

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 127 IPPPHAEAXYAPGRLISSVPHRPTTRI 207
           +PPPH  +  +PG  +   PH P++++
Sbjct: 168 VPPPHPVSHPSPGHNVQGSPHNPSSQL 194


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,213,351
Number of Sequences: 237096
Number of extensions: 2378380
Number of successful extensions: 6083
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6068
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)