Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0796.Seq
         (754 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8GEF9 Cluster: Putative uncharacterized protein; n=1; ...   145   1e-33
UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp. ...    93   5e-18
UniRef50_P62593 Cluster: Beta-lactamase TEM precursor; n=261; ro...    56   1e-06
UniRef50_Q9R4I2 Cluster: Beta-lactamase; n=5; Gammaproteobacteri...    44   0.004
UniRef50_Q1UYY9 Cluster: Putative uncharacterized protein; n=1; ...    34   4.3  
UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia sp...    33   7.6  
UniRef50_A0D095 Cluster: Chromosome undetermined scaffold_33, wh...    33   10.0 
UniRef50_Q4P5T7 Cluster: Putative uncharacterized protein; n=1; ...    33   10.0 

>UniRef50_Q8GEF9 Cluster: Putative uncharacterized protein; n=1;
           Erwinia amylovora|Rep: Putative uncharacterized protein
           - Erwinia amylovora (Fire blight bacteria)
          Length = 99

 Score =  145 bits (351), Expect = 1e-33
 Identities = 64/64 (100%), Positives = 64/64 (100%)
 Frame = +2

Query: 509 SGKCARNPYLFIFLNTFKYVSAHETITLINASIILKKEEYEYSTFPCRPYSLFCGILPSC 688
           SGKCARNPYLFIFLNTFKYVSAHETITLINASIILKKEEYEYSTFPCRPYSLFCGILPSC
Sbjct: 27  SGKCARNPYLFIFLNTFKYVSAHETITLINASIILKKEEYEYSTFPCRPYSLFCGILPSC 86

Query: 689 FCSP 700
           FCSP
Sbjct: 87  FCSP 90


>UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp.
           SS|Rep: LacZ alpha peptide - Beggiatoa sp. SS
          Length = 73

 Score = 93.5 bits (222), Expect = 5e-18
 Identities = 49/72 (68%), Positives = 49/72 (68%)
 Frame = -3

Query: 497 DAPCSGALSAAGVVVTRSVXXXXXXXXXXXXXXXXXXXXXXXAGFPRQALNRGLPLGFRF 318
           DAPCSGALSAAGVVVTRSV                       AGFPRQALNRGLPLGFRF
Sbjct: 2   DAPCSGALSAAGVVVTRSVTATLASALAPAPFAFFPSFLATFAGFPRQALNRGLPLGFRF 61

Query: 317 SALRHLDPKKLD 282
           SALRHLDPKKLD
Sbjct: 62  SALRHLDPKKLD 73


>UniRef50_P62593 Cluster: Beta-lactamase TEM precursor; n=261;
           root|Rep: Beta-lactamase TEM precursor - Escherichia
           coli
          Length = 286

 Score = 55.6 bits (128), Expect = 1e-06
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +3

Query: 627 MSIQHFRVALIPFFAAFCLPVFAH 698
           MSIQHFRVALIPFFAAFCLPVFAH
Sbjct: 1   MSIQHFRVALIPFFAAFCLPVFAH 24



 Score = 45.6 bits (103), Expect = 0.001
 Identities = 24/33 (72%), Positives = 26/33 (78%)
 Frame = +2

Query: 656 YSLFCGILPSCFCSPETLVKVKDAEDQLGARVG 754
           ++ FC  LP  F  PETLVKVKDAEDQLGARVG
Sbjct: 14  FAAFC--LP-VFAHPETLVKVKDAEDQLGARVG 43


>UniRef50_Q9R4I2 Cluster: Beta-lactamase; n=5;
           Gammaproteobacteria|Rep: Beta-lactamase - Shigella
           flexneri
          Length = 52

 Score = 44.0 bits (99), Expect = 0.004
 Identities = 20/22 (90%), Positives = 20/22 (90%)
 Frame = +2

Query: 689 FCSPETLVKVKDAEDQLGARVG 754
           F  PETLVKVKDAEDQLGARVG
Sbjct: 2   FAHPETLVKVKDAEDQLGARVG 23


>UniRef50_Q1UYY9 Cluster: Putative uncharacterized protein; n=1;
           Candidatus Pelagibacter ubique HTCC1002|Rep: Putative
           uncharacterized protein - Candidatus Pelagibacter ubique
           HTCC1002
          Length = 26

 Score = 33.9 bits (74), Expect = 4.3
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = -2

Query: 699 GEQKQEGKMPQKRE 658
           GEQKQEGKMPQKRE
Sbjct: 13  GEQKQEGKMPQKRE 26


>UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia
           spumigena CCY 9414|Rep: Beta-D-galactosidase - Nodularia
           spumigena CCY 9414
          Length = 72

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 12/16 (75%), Positives = 16/16 (100%)
 Frame = +2

Query: 2   RPSQQLRTLNGEWQIV 49
           RPSQQLR+LNGEW+++
Sbjct: 57  RPSQQLRSLNGEWRLM 72


>UniRef50_A0D095 Cluster: Chromosome undetermined scaffold_33, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_33,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1173

 Score = 32.7 bits (71), Expect = 10.0
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = -2

Query: 156 VYSFDL*GILPISAYWLKNELI*QKFNANFNKILTLTI 43
           +++F L G L    +WLKN+    KF++ F ++L L +
Sbjct: 665 IFNFSLQGALSYIDFWLKNQHFDDKFSSTFTQLLLLAL 702


>UniRef50_Q4P5T7 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 779

 Score = 32.7 bits (71), Expect = 10.0
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = -2

Query: 465 GCGGYAQRDRYTCQRPSARSFRFLPFLSRHVRRLSPSSSKSG 340
           G GGY+QR +    R S R+F   P L R + R    S +SG
Sbjct: 292 GSGGYSQRHKSASSRESIRTFFPAPSLPRLISRPGSQSRESG 333


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 725,177,155
Number of Sequences: 1657284
Number of extensions: 14621748
Number of successful extensions: 33321
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 32262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33311
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62146450145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)