Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0796.Seq
         (754 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.         30   2.9  
L35770-1|AAA64525.1|  412|Drosophila melanogaster fringe protein...    29   5.2  
AY070927-1|AAL48549.1|  412|Drosophila melanogaster RE03010p pro...    29   5.2  
AE014296-3445|AAF51658.2|  412|Drosophila melanogaster CG10580-P...    29   5.2  
AY060779-1|AAL28327.1|  387|Drosophila melanogaster GH24644p pro...    29   9.0  
AE013599-672|AAF59071.1|  387|Drosophila melanogaster CG8735-PA ...    29   9.0  

>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
          Length = 1494

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = -1

Query: 244  DGFSPFDVGVHVL**WTLVPNWNNTQPYLGLFF*FIRDFADFGLLVKK*ADLTK 83
            DG  P D G+  +  + +  N +  Q +LGL   F R   DF  L K   D+ K
Sbjct: 923  DGIMPNDKGIEAIKNFPIPNNVHTVQSFLGLCSYFRRFIKDFSRLAKPLHDILK 976


>L35770-1|AAA64525.1|  412|Drosophila melanogaster fringe protein
           protein.
          Length = 412

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +2

Query: 530 PYLFIFLNTFKYVSAHETITLINASIILKKEEYEYSTFPCRPYSLFCGILP-SCFCSP 700
           P  FI  +TF+   +     + N   ++K + ++  T P R YSL C + P   FC P
Sbjct: 354 PMEFIRQDTFQDQVSFSYAHMKNQWNVIKVDGFDMKTDPKRFYSLHCQLFPYFSFCPP 411


>AY070927-1|AAL48549.1|  412|Drosophila melanogaster RE03010p
           protein.
          Length = 412

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +2

Query: 530 PYLFIFLNTFKYVSAHETITLINASIILKKEEYEYSTFPCRPYSLFCGILP-SCFCSP 700
           P  FI  +TF+   +     + N   ++K + ++  T P R YSL C + P   FC P
Sbjct: 354 PMEFIRQDTFQDQVSFSYAHMKNQWNVIKVDGFDMKTDPKRFYSLHCQLFPYFSFCPP 411


>AE014296-3445|AAF51658.2|  412|Drosophila melanogaster CG10580-PA
           protein.
          Length = 412

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +2

Query: 530 PYLFIFLNTFKYVSAHETITLINASIILKKEEYEYSTFPCRPYSLFCGILP-SCFCSP 700
           P  FI  +TF+   +     + N   ++K + ++  T P R YSL C + P   FC P
Sbjct: 354 PMEFIRQDTFQDQVSFSYAHMKNQWNVIKVDGFDMKTDPKRFYSLHCQLFPYFSFCPP 411


>AY060779-1|AAL28327.1|  387|Drosophila melanogaster GH24644p
           protein.
          Length = 387

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +2

Query: 608 ILKKEEYEYSTFPCRPYSLFCGIL 679
           +L KEEYEY+TF C     FC +L
Sbjct: 277 MLPKEEYEYTTFRC----AFCNVL 296


>AE013599-672|AAF59071.1|  387|Drosophila melanogaster CG8735-PA
           protein.
          Length = 387

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +2

Query: 608 ILKKEEYEYSTFPCRPYSLFCGIL 679
           +L KEEYEY+TF C     FC +L
Sbjct: 277 MLPKEEYEYTTFRC----AFCNVL 296


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,468,430
Number of Sequences: 53049
Number of extensions: 669622
Number of successful extensions: 1571
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1571
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)