Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0792X.Seq
(555 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0500 - 10993675-10994067,10994434-10995738 50 2e-06
06_02_0244 - 13445023-13445400,13445495-13446823 49 2e-06
09_04_0500 - 18120287-18122233 44 6e-05
04_04_1523 - 34148407-34150224 44 6e-05
06_01_1174 - 10025086-10027217,10027271-10027333,10027704-10027866 44 8e-05
08_02_1080 - 24197514-24199415 43 1e-04
05_07_0314 + 29162075-29163436,29163520-29163900,29164911-29165441 40 0.001
01_01_0946 - 7442907-7443284,7443797-7445122 32 0.27
01_01_0139 + 1263356-1264273 31 0.47
09_06_0038 - 20415363-20415883,20415917-20416596,20416858-204169... 29 1.9
02_04_0223 + 21047240-21047304,21047577-21047706,21048783-210488... 29 1.9
10_01_0146 - 1719997-1720386,1721498-1721515 29 2.5
04_04_0887 + 29095087-29096166 29 2.5
03_03_0233 - 15656930-15656998,15657459-15657591,15657677-156577... 29 3.3
10_08_1040 + 22503641-22503681,22503838-22504299,22506952-225073... 28 4.4
06_02_0046 + 10928708-10928798,10929997-10930077,10930567-109306... 28 4.4
02_05_0767 + 31609773-31610174,31610409-31610501,31610608-316106... 28 4.4
01_03_0045 + 11929624-11929890,11930500-11930551,11932683-119331... 28 4.4
11_03_0177 + 11269754-11270320,11271701-11272180,11272663-112732... 28 5.8
02_02_0670 + 12787817-12787876,12788129-12788388,12788869-127892... 28 5.8
10_08_1023 - 22341815-22342042,22342179-22342247,22342717-223428... 27 7.6
10_08_0784 + 20529526-20529604,20529996-20530562,20530687-205316... 27 7.6
04_04_0982 - 29914146-29914187,29914839-29915168 27 7.6
03_02_0398 + 8121748-8122860,8122946-8123242 27 7.6
01_01_0672 + 5147916-5147976,5148087-5148166,5148329-5148973,514... 27 7.6
>02_02_0500 - 10993675-10994067,10994434-10995738
Length = 565
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +2
Query: 314 PQFSELVLQAETAIDNGIFPERIYQGSSGSYFVKKAGGKI-IGVFKPKDEEPYGRLNP 484
P E++ + I+NG P +GS G YF+K + G+ + VFKP DEEP + NP
Sbjct: 241 PAVMEMIYSTISGIENGYLPVMSTEGSGGVYFMKDSSGESNVAVFKPIDEEPMAKNNP 298
>06_02_0244 - 13445023-13445400,13445495-13446823
Length = 568
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +2
Query: 329 LVLQAETAIDNGIFPERIYQGSSGSYFVKKAGG-KIIGVFKPKDEEPYGRLNP 484
++ A ++NG P +GS G YF++ A G K I VFKP+DEEP + NP
Sbjct: 254 MISSAIAGLENGYLPVMSAEGSGGVYFMQDASGEKNIAVFKPRDEEPMAKNNP 306
>09_04_0500 - 18120287-18122233
Length = 648
Score = 44.4 bits (100), Expect = 6e-05
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +2
Query: 317 QFSELVLQAETAIDNGIFPERIYQGSSGSYFVKKAGGKIIGVFKPKDEEPYGRLNP 484
+ +L AI NG+ P + G G+Y+ K G+ + + KP DEEP+ NP
Sbjct: 133 RMKQLAKDVVEAIRNGVDPVPVNSGMGGAYYFKNIYGERVAIVKPTDEEPFAPNNP 188
>04_04_1523 - 34148407-34150224
Length = 605
Score = 44.4 bits (100), Expect = 6e-05
Identities = 21/52 (40%), Positives = 28/52 (53%)
Frame = +2
Query: 329 LVLQAETAIDNGIFPERIYQGSSGSYFVKKAGGKIIGVFKPKDEEPYGRLNP 484
LV TAI +G+ P I G GSY+ + G + + KP DEEP+ NP
Sbjct: 137 LVDDVVTAIRSGVDPVPIGSGLGGSYYFRNISGDRVAIVKPTDEEPFAPNNP 188
>06_01_1174 - 10025086-10027217,10027271-10027333,10027704-10027866
Length = 785
Score = 44.0 bits (99), Expect = 8e-05
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +2
Query: 326 ELVLQAETAIDNGIFPERIYQGSSGSYFVKKAGGKIIGVFKPKDEEPYGRLNP 484
+LV AI NG+ P + G G+Y+ + + G+ + KP DEEP+ NP
Sbjct: 284 QLVKDVARAIRNGVDPIPVNSGLGGAYYFRNSKGENAAIVKPNDEEPFAPNNP 336
>08_02_1080 - 24197514-24199415
Length = 633
Score = 43.2 bits (97), Expect = 1e-04
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +2
Query: 317 QFSELVLQAETAIDNGIFPERIYQGSSGSYFVKKAGGKIIGVFKPKDEEPYGRLNP 484
+ +LV I+ GI P I G G+Y+ + G+ + KP DEEP+G NP
Sbjct: 133 RMKQLVDDIVRGIEKGIEPVAISSGMGGAYYFRDMWGEHAAIVKPTDEEPFGPNNP 188
>05_07_0314 + 29162075-29163436,29163520-29163900,29164911-29165441
Length = 757
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 314 PQFSELVLQAETAIDNGIFPERIYQGSSGSYFVKKAGGKI-IGVFKPKDEEPYGRLNP 484
P LV ++ G P +G+ G+YF++ A G+ + VFKP DEEP NP
Sbjct: 243 PVIENLVGAVLAGMEKGNAPIMSSEGTGGAYFMQDASGQEHVAVFKPVDEEPMAANNP 300
>01_01_0946 - 7442907-7443284,7443797-7445122
Length = 567
Score = 32.3 bits (70), Expect = 0.27
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 386 QGSSGSYFVKKAGGK-IIGVFKPKDEEPYGRLNP 484
+G+ G YF+ + G+ + VFKP +EEP + NP
Sbjct: 263 EGTGGVYFMLDSSGQEYVAVFKPINEEPMAKDNP 296
>01_01_0139 + 1263356-1264273
Length = 305
Score = 31.5 bits (68), Expect = 0.47
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = +3
Query: 252 SSRCLAAAATSKYPSITSQMTPSSASWYYRRRRPLITASSRR---GYTK--DPAGRTS*K 416
++R AA AT S ++ TP+ A W RRP +A +RR G T P+ TS +
Sbjct: 80 AARSPAAGATRAKASASASSTPALAPWRPSSRRPRSSAPTRRTAAGATSPTTPSTTTSAR 139
Query: 417 KRAEKSSAFS 446
R ++ A S
Sbjct: 140 ARTRRAHARS 149
>09_06_0038 -
20415363-20415883,20415917-20416596,20416858-20416911,
20417440-20417489,20417665-20417800,20419030-20419128,
20419411-20419676
Length = 601
Score = 29.5 bits (63), Expect = 1.9
Identities = 22/80 (27%), Positives = 36/80 (45%)
Frame = +3
Query: 246 RESSRCLAAAATSKYPSITSQMTPSSASWYYRRRRPLITASSRRGYTKDPAGRTS*KKRA 425
R SS + +++S P+ S +P S+SW + R + ASS + A +S +
Sbjct: 5 RRSSTSSSPSSSSSSPTAAS--SPPSSSWIHLRSLLVAAASSSSSASSSAAAGSSVAMVS 62
Query: 426 EKSSAFSSRKTKSPTVV*TP 485
+ A SS + SP P
Sbjct: 63 ASAPAASSSPSPSPAPAPAP 82
>02_04_0223 +
21047240-21047304,21047577-21047706,21048783-21048871,
21049592-21049647,21049721-21049776,21050163-21050202,
21050505-21050629,21050715-21050808,21051401-21051480,
21051598-21051640,21057539-21057630,21057746-21057919
Length = 347
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = -3
Query: 325 AELGVIWEVIEGYFEVAAAAKQRLDSRFTPGESRLPSNSTAGTKQISS 182
A+ G + +++GY+E A + L S+FT G L GT+++ S
Sbjct: 229 ADFGFVNYLLQGYYEGKRATEAELLSKFTYGGVILRPGFIHGTRRVGS 276
>10_01_0146 - 1719997-1720386,1721498-1721515
Length = 135
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -3
Query: 256 LDSRFTPGESRLPSNSTAGTKQISSELLDNETTPSSGGAVV 134
L+ RFT G PS +TA + L ETT GGA +
Sbjct: 31 LNRRFTDGGDVAPSETTADDGGAALRLRPAETTADGGGAAL 71
>04_04_0887 + 29095087-29096166
Length = 359
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 264 LAAAATSKYPSITSQMTPSSASWYYRRRRPLITASSRRGYTKDPAGRTS 410
+A +ATS + T T ++A+W R P +AS+ G P+ +S
Sbjct: 26 VAVSATSPCSAATETSTATTATWRRARTHPSASASASTGTLTVPSASSS 74
>03_03_0233 -
15656930-15656998,15657459-15657591,15657677-15657729,
15658640-15658690,15658790-15658859,15659009-15659223,
15660465-15660570,15660686-15660753,15660861-15661148,
15661253-15661408,15661450-15661544,15661632-15661788
Length = 486
Score = 28.7 bits (61), Expect = 3.3
Identities = 23/102 (22%), Positives = 46/102 (45%), Gaps = 8/102 (7%)
Frame = -3
Query: 331 QLAELGVIWEVIEGYFEVAAAAKQR----LDSRFTPGESRLPSNSTAGTKQISSELLDNE 164
QLA+ W + G+ + +A+ LDS P + LP+ S++ S++L+
Sbjct: 268 QLADSQQSWIDLLGFIDKKSASVDMYNFLLDSGMDPVSADLPAASSSSPSSSSAQLMKYS 327
Query: 163 TTPSS----GGAVVVFGLSKSRFNRVSSVLMSNVKRRSFTEP 50
T SS G+ + G+ ++ +N+K + ++P
Sbjct: 328 TYLSSQAADSGSNTIEGIMNGVIKEKLKIIPNNLKWQELSDP 369
>10_08_1040 +
22503641-22503681,22503838-22504299,22506952-22507361,
22507484-22507640,22507718-22507937,22508053-22508106,
22508193-22508272,22508359-22508636,22509193-22509515,
22509590-22509853,22510453-22510860
Length = 898
Score = 28.3 bits (60), Expect = 4.4
Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 8/90 (8%)
Frame = +3
Query: 192 CLVPAVEFEGNLDSPG----VNRESSRCLAAAATSKYPSITSQMTPSSASWYYRRRRPLI 359
C AVE+ GN DS V R S + A+ +K TS ++ ++ RP I
Sbjct: 720 CNASAVEYSGNSDSESEIFRVKRRSGVSVKPASDAK----TSNLSDQQVLRRLKKVRPEI 775
Query: 360 TASSRR----GYTKDPAGRTS*KKRAEKSS 437
++R G+ P+GR S K SS
Sbjct: 776 QQHNKRPEDYGHCSVPSGRMSMKNLNSSSS 805
>06_02_0046 +
10928708-10928798,10929997-10930077,10930567-10930685,
10931275-10931894,10931992-10933184,10933280-10933359,
10933751-10933846,10933931-10934004,10936007-10936151,
10936323-10936487
Length = 887
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +3
Query: 300 TSQMTPSSASWYYRRRRPLITASSRRGYTKDPAGRTS*KKRAEKSSAFSSRKTKSPTVV 476
+S + P+++S + R +I+ ++ P G TS + SSA +S T S + V
Sbjct: 644 SSNLAPANSSLHSRESDNIISKEAKLASLSQPVGATSASASIQGSSAQASTSTTSQSKV 702
>02_05_0767 +
31609773-31610174,31610409-31610501,31610608-31610668,
31610797-31610865,31611274-31611440
Length = 263
Score = 28.3 bits (60), Expect = 4.4
Identities = 21/59 (35%), Positives = 28/59 (47%)
Frame = +3
Query: 225 LDSPGVNRESSRCLAAAATSKYPSITSQMTPSSASWYYRRRRPLITASSRRGYTKDPAG 401
+ SP V + R L AA S S +S +PSS S P+ T++ RRG AG
Sbjct: 18 IPSPPVAKPG-RPLTVAACSNSSSSSSSSSPSSTSCSAAWSLPVATSAGRRGLLALGAG 75
>01_03_0045 +
11929624-11929890,11930500-11930551,11932683-11933103,
11933574-11934162
Length = 442
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 197 SASXRVRGQSGFSRSEPRVEPLLGGRGDFEVSF 295
SAS ++RG++ ++S RVEPLL G F + F
Sbjct: 241 SASVKIRGKNRLNQSLSRVEPLLDA-GLFALGF 272
>11_03_0177 +
11269754-11270320,11271701-11272180,11272663-11273292,
11273377-11273443,11273510-11273620,11273696-11275206
Length = 1121
Score = 27.9 bits (59), Expect = 5.8
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = -3
Query: 304 EVIEGYFEVAAAAKQRLDSRFTPGESRLPSNSTAGTKQISSELLDNETTP 155
E IEG ++AA ++++ F + LP+N AG I SE N+ TP
Sbjct: 567 ETIEGTHDIAAISEEQTKLIFRDEHNELPTNVIAG-PAIPSE--KNQPTP 613
>02_02_0670 +
12787817-12787876,12788129-12788388,12788869-12789205,
12789457-12789549
Length = 249
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +2
Query: 182 RRDLFSASXRVRGQSGFSRSEPRVEPLLGGRGDFEVSFNYFPDDPQ 319
+RD+ A R+ +G + LGGR FNY+P P+
Sbjct: 121 KRDVLRAMARI---AGLDDDDQHFVDQLGGRATVHARFNYYPPCPR 163
>10_08_1023 -
22341815-22342042,22342179-22342247,22342717-22342840,
22343193-22343317,22343815-22344276,22344357-22344700,
22345061-22345406,22345492-22345941,22346760-22347051,
22347171-22347515,22347611-22347834,22348072-22348563,
22348664-22349056,22349601-22349741,22349845-22350207,
22350494-22352683,22353298-22353360,22353434-22353535,
22353672-22354027,22354326-22354413,22354517-22354750,
22355508-22355975
Length = 2632
Score = 27.5 bits (58), Expect = 7.6
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = +3
Query: 231 SPGVNRESSRCLAAAATSKYPSITSQMTPSSASWYYRRRRPLITASSRRGYTKDPA 398
SP R SS +++A ++ P ++ SW R RR L ASS T DPA
Sbjct: 20 SPSSPRASSASSSSSAAAEEPEYLARYFVVKHSWRGRYRRILCIASSGL-VTLDPA 74
>10_08_0784 +
20529526-20529604,20529996-20530562,20530687-20531639,
20532292-20532479,20532578-20533013
Length = 740
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -1
Query: 81 VMLNVVVLPSLIYFRLNFF 25
+ML V+ +PSLIYF L F
Sbjct: 165 IMLGVLSIPSLIYFALTIF 183
>04_04_0982 - 29914146-29914187,29914839-29915168
Length = 123
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = -1
Query: 396 LDPWYILSGKMPLSMA--VSACSTSSLNWGS 310
+DPWYI PL +A S S+S++N GS
Sbjct: 1 MDPWYIRKSIAPLLLAKHSSRTSSSAVNGGS 31
>03_02_0398 + 8121748-8122860,8122946-8123242
Length = 469
Score = 27.5 bits (58), Expect = 7.6
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Frame = +3
Query: 126 PNTTTAPPDDGVVSLSSSSEEICL---VPAVEFEGNLDSPGVNRESSRCLAAAATSKYPS 296
P+ P V +L ++++E+ V +V FEG N E C AA +++ S
Sbjct: 382 PDGEYDPTPANVHALLAAADEMLKHRNVESVLFEGRRVGEQTNAERLDCFAAELVAEHRS 441
Query: 297 ITSQMTPSSASWYYRRRRPLITASSRRG 380
S++ P+ A R++P A + G
Sbjct: 442 RGSRIGPTVAFKQAPRKQPPAAAVAAMG 469
>01_01_0672 +
5147916-5147976,5148087-5148166,5148329-5148973,
5149111-5149341
Length = 338
Score = 27.5 bits (58), Expect = 7.6
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 252 SSRCLAAAATSKYPSITSQMTP 317
SS AAAAT YP ++SQ+ P
Sbjct: 112 SSSAAAAAATGFYPELSSQVAP 133
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,784,908
Number of Sequences: 37544
Number of extensions: 337713
Number of successful extensions: 1193
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1189
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1257681096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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