Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0792X.Seq
(555 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64862-1|AAM69079.2| 593|Caenorhabditis elegans Hypothetical pr... 87 1e-17
Z77655-8|CAB01138.3| 402|Caenorhabditis elegans Hypothetical pr... 75 3e-14
AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical ... 33 0.18
Z92796-1|CAB07230.1| 101|Caenorhabditis elegans Hypothetical pr... 29 1.7
AF067214-7|AAY86233.1| 96|Caenorhabditis elegans Hypothetical ... 29 1.7
Z22177-2|CAA80145.1| 1418|Caenorhabditis elegans Hypothetical pr... 29 3.0
AJ272503-1|CAC81659.1| 1027|Caenorhabditis elegans putative TRP ... 29 3.0
Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical pr... 28 3.9
U28739-7|AAB93458.1| 681|Caenorhabditis elegans Cell division c... 28 5.2
U28739-6|AAM54206.1| 695|Caenorhabditis elegans Cell division c... 28 5.2
U28739-5|AAT68903.1| 707|Caenorhabditis elegans Cell division c... 28 5.2
U28739-4|AAM54205.1| 693|Caenorhabditis elegans Cell division c... 28 5.2
U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division c... 28 5.2
AY661747-1|AAT74546.1| 707|Caenorhabditis elegans CDC-14 phosph... 28 5.2
AY661746-1|AAT74545.1| 695|Caenorhabditis elegans CDC-14 phosph... 28 5.2
AY661745-1|AAT74544.1| 681|Caenorhabditis elegans CDC-14 phosph... 28 5.2
AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14 phosph... 28 5.2
AY661743-1|AAT74542.1| 693|Caenorhabditis elegans CDC-14 phosph... 28 5.2
AF000363-1|AAB94407.1| 681|Caenorhabditis elegans protein phosp... 28 5.2
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 27 6.9
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 27 6.9
AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin... 27 6.9
U88184-1|AAK31517.1| 476|Caenorhabditis elegans C-type lectin p... 27 9.1
>U64862-1|AAM69079.2| 593|Caenorhabditis elegans Hypothetical
protein ZC8.6 protein.
Length = 593
Score = 86.6 bits (205), Expect = 1e-17
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = +2
Query: 338 QAETAIDNGIFPERIYQGSSGSYFVKKAGGKIIGVFKPKDEEPYGRLNPXWMKWMHK 508
+A AI NG +P+RI QGSSGSYFVK +II VFKPK+EEPYG LNP W+KW+H+
Sbjct: 116 EACRAIHNGHYPQRIAQGSSGSYFVKNMHDEIIAVFKPKNEEPYGSLNPKWLKWIHR 172
Score = 34.7 bits (76), Expect = 0.045
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +1
Query: 505 QVCCPCCFGRSCLIPNQ 555
+V PCCFGRSCL PNQ
Sbjct: 172 RVFLPCCFGRSCLPPNQ 188
>Z77655-8|CAB01138.3| 402|Caenorhabditis elegans Hypothetical
protein C56A3.8a protein.
Length = 402
Score = 75.4 bits (177), Expect = 3e-14
Identities = 34/66 (51%), Positives = 45/66 (68%)
Frame = +2
Query: 311 DPQFSELVLQAETAIDNGIFPERIYQGSSGSYFVKKAGGKIIGVFKPKDEEPYGRLNPXW 490
D +F + +A+ AI+ GI P I +GSSGSYFV G+I+GVFKPKDEEP+ LNP W
Sbjct: 33 DDEFQLVFQKAQEAINKGIQPSLIPEGSSGSYFVYGLEGEIVGVFKPKDEEPFASLNPKW 92
Query: 491 MKWMHK 508
K+ +
Sbjct: 93 PKFFQR 98
Score = 35.1 bits (77), Expect = 0.034
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 472 SFEPXMDEMDAQVCCPCCFGRSCLIPN 552
S P + ++ C CCFGR+CLIPN
Sbjct: 87 SLNPKWPKFFQRMLCFCCFGRACLIPN 113
>AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical
protein H11E01.3 protein.
Length = 1464
Score = 32.7 bits (71), Expect = 0.18
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 294 SITSQMTPSSASWYYRRRR-PLITASSRRGYTKDP 395
S+ Q P ASW++RRR P +TAS+ K+P
Sbjct: 145 SVARQPPPQQASWFFRRRSLPSLTASAPGNTLKEP 179
>Z92796-1|CAB07230.1| 101|Caenorhabditis elegans Hypothetical
protein H25K10.2 protein.
Length = 101
Score = 29.5 bits (63), Expect = 1.7
Identities = 20/66 (30%), Positives = 31/66 (46%)
Frame = +3
Query: 144 PPDDGVVSLSSSSEEICLVPAVEFEGNLDSPGVNRESSRCLAAAATSKYPSITSQMTPSS 323
PP + L +EEIC + + +E + + SS + A + PS TS++ P S
Sbjct: 2 PPKKTMEQLVKDAEEICRIQTLMYEERMARVALETLSS---SVPALKRVPS-TSKIPPES 57
Query: 324 ASWYYR 341
S Y R
Sbjct: 58 ISQYKR 63
>AF067214-7|AAY86233.1| 96|Caenorhabditis elegans Hypothetical
protein F56C3.10 protein.
Length = 96
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +3
Query: 144 PPDDGVVSLSSSSEEICLVPAVEFEGNLDSPGVNRESSRCLAAAATSKYPSITSQMTPSS 323
PP + L +EEIC + + +E + + + S + A K PS TSQ+ P S
Sbjct: 2 PPKKTMEQLVKDAEEICRIQTLMYEERMAREAL-KNISTSSSVPAPKKVPS-TSQIPPES 59
Query: 324 AS 329
S
Sbjct: 60 KS 61
>Z22177-2|CAA80145.1| 1418|Caenorhabditis elegans Hypothetical protein
ZK512.3 protein.
Length = 1418
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -3
Query: 262 QRLDSRFTPGESRLPSNSTAGTKQISSELLDNE 164
+RLDS + R+PSN T+ ++SE+ +NE
Sbjct: 1329 RRLDSSIITADKRIPSNDTS-PAHLASEVAENE 1360
>AJ272503-1|CAC81659.1| 1027|Caenorhabditis elegans putative TRP
homologous cationchannel protein protein.
Length = 1027
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -3
Query: 262 QRLDSRFTPGESRLPSNSTAGTKQISSELLDNE 164
+RLDS + R+PSN T+ ++SE+ +NE
Sbjct: 938 RRLDSSIITADKRIPSNDTS-PAHLASEVAENE 969
>Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical
protein F55A11.3 protein.
Length = 610
Score = 28.3 bits (60), Expect = 3.9
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +3
Query: 195 LVPAVEFEGNLDSPGVNRESSRCLAAAATSKYPSITSQMTPSSASWYYRRRRPLITASS 371
+VP+ E E P ++ +S ATS PSI +PS++S P +TASS
Sbjct: 523 VVPSDESEQEAPGPSTDQVTSEEQEIPATSSAPSIFRTESPSTSSTAPSTSSP-VTASS 580
>U28739-7|AAB93458.1| 681|Caenorhabditis elegans Cell division
cycle related protein14, isoform c protein.
Length = 681
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +3
Query: 294 SITSQMTPSSASWYYRRRRPLITASSRRGYTKDPAGRTS*KKRAEKSSAFSSRKTKSPT 470
S T QMT S ++ R R P+I S+ G + + R K + A+ +R + T
Sbjct: 477 SSTPQMTVPSQAYLNRNREPIIVTPSKNGTSSGTSSRQL-KTTPNGNVAYRTRNSSGNT 534
>U28739-6|AAM54206.1| 695|Caenorhabditis elegans Cell division
cycle related protein14, isoform d protein.
Length = 695
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +3
Query: 294 SITSQMTPSSASWYYRRRRPLITASSRRGYTKDPAGRTS*KKRAEKSSAFSSRKTKSPT 470
S T QMT S ++ R R P+I S+ G + + R K + A+ +R + T
Sbjct: 477 SSTPQMTVPSQAYLNRNREPIIVTPSKNGTSSGTSSRQL-KTTPNGNVAYRTRNSSGNT 534
>U28739-5|AAT68903.1| 707|Caenorhabditis elegans Cell division
cycle related protein14, isoform e protein.
Length = 707
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +3
Query: 294 SITSQMTPSSASWYYRRRRPLITASSRRGYTKDPAGRTS*KKRAEKSSAFSSRKTKSPT 470
S T QMT S ++ R R P+I S+ G + + R K + A+ +R + T
Sbjct: 477 SSTPQMTVPSQAYLNRNREPIIVTPSKNGTSSGTSSRQL-KTTPNGNVAYRTRNSSGNT 534
>U28739-4|AAM54205.1| 693|Caenorhabditis elegans Cell division
cycle related protein14, isoform a protein.
Length = 693
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +3
Query: 294 SITSQMTPSSASWYYRRRRPLITASSRRGYTKDPAGRTS*KKRAEKSSAFSSRKTKSPT 470
S T QMT S ++ R R P+I S+ G + + R K + A+ +R + T
Sbjct: 477 SSTPQMTVPSQAYLNRNREPIIVTPSKNGTSSGTSSRQL-KTTPNGNVAYRTRNSSGNT 534
>U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division
cycle related protein14, isoform b protein.
Length = 1063
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +3
Query: 294 SITSQMTPSSASWYYRRRRPLITASSRRGYTKDPAGRTS*KKRAEKSSAFSSRKTKSPT 470
S T QMT S ++ R R P+I S+ G + + R K + A+ +R + T
Sbjct: 477 SSTPQMTVPSQAYLNRNREPIIVTPSKNGTSSGTSSRQL-KTTPNGNVAYRTRNSSGNT 534
>AY661747-1|AAT74546.1| 707|Caenorhabditis elegans CDC-14
phosphatase isoform E protein.
Length = 707
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +3
Query: 294 SITSQMTPSSASWYYRRRRPLITASSRRGYTKDPAGRTS*KKRAEKSSAFSSRKTKSPT 470
S T QMT S ++ R R P+I S+ G + + R K + A+ +R + T
Sbjct: 477 SSTPQMTVPSQAYLNRNREPIIVTPSKNGTSSGTSSRQL-KTTPNGNVAYRTRNSSGNT 534
>AY661746-1|AAT74545.1| 695|Caenorhabditis elegans CDC-14
phosphatase isoform D protein.
Length = 695
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +3
Query: 294 SITSQMTPSSASWYYRRRRPLITASSRRGYTKDPAGRTS*KKRAEKSSAFSSRKTKSPT 470
S T QMT S ++ R R P+I S+ G + + R K + A+ +R + T
Sbjct: 477 SSTPQMTVPSQAYLNRNREPIIVTPSKNGTSSGTSSRQL-KTTPNGNVAYRTRNSSGNT 534
>AY661745-1|AAT74544.1| 681|Caenorhabditis elegans CDC-14
phosphatase isoform C protein.
Length = 681
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +3
Query: 294 SITSQMTPSSASWYYRRRRPLITASSRRGYTKDPAGRTS*KKRAEKSSAFSSRKTKSPT 470
S T QMT S ++ R R P+I S+ G + + R K + A+ +R + T
Sbjct: 477 SSTPQMTVPSQAYLNRNREPIIVTPSKNGTSSGTSSRQL-KTTPNGNVAYRTRNSSGNT 534
>AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14
phosphatase isoform B protein.
Length = 1063
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +3
Query: 294 SITSQMTPSSASWYYRRRRPLITASSRRGYTKDPAGRTS*KKRAEKSSAFSSRKTKSPT 470
S T QMT S ++ R R P+I S+ G + + R K + A+ +R + T
Sbjct: 477 SSTPQMTVPSQAYLNRNREPIIVTPSKNGTSSGTSSRQL-KTTPNGNVAYRTRNSSGNT 534
>AY661743-1|AAT74542.1| 693|Caenorhabditis elegans CDC-14
phosphatase isoform A protein.
Length = 693
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +3
Query: 294 SITSQMTPSSASWYYRRRRPLITASSRRGYTKDPAGRTS*KKRAEKSSAFSSRKTKSPT 470
S T QMT S ++ R R P+I S+ G + + R K + A+ +R + T
Sbjct: 477 SSTPQMTVPSQAYLNRNREPIIVTPSKNGTSSGTSSRQL-KTTPNGNVAYRTRNSSGNT 534
>AF000363-1|AAB94407.1| 681|Caenorhabditis elegans protein
phosphatase CDC14 protein.
Length = 681
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +3
Query: 294 SITSQMTPSSASWYYRRRRPLITASSRRGYTKDPAGRTS*KKRAEKSSAFSSRKTKSPT 470
S T QMT S ++ R R P+I S+ G + + R K + A+ +R + T
Sbjct: 477 SSTPQMTVPSQAYLNRNREPIIVTPSKNGTSSGTSSRQL-KTTPNGNVAYRTRNSSGNT 534
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +3
Query: 414 KKRAEKSSAFSSRKTKSPTVV 476
KK+ EKS +F S+K+++P VV
Sbjct: 12946 KKKTEKSDSFISQKSETPPVV 12966
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +3
Query: 414 KKRAEKSSAFSSRKTKSPTVV 476
KK+ EKS +F S+K+++P VV
Sbjct: 12946 KKKTEKSDSFISQKSETPPVV 12966
>AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin
related protein 2 protein.
Length = 1335
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 237 GVNRESSRCLAAAATSKYPSITSQMTPSSASWYYRRRRPLITASSRRG 380
GV S CL + P +S SS+S Y +RR ++ +S R G
Sbjct: 328 GVQEHSRSCLNDVQFAFLPYNSSNSLESSSSSYEKRRFSVVRSSRRDG 375
>U88184-1|AAK31517.1| 476|Caenorhabditis elegans C-type lectin
protein 19 protein.
Length = 476
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +3
Query: 168 LSSSSEEICLVPAVEFEGNLDSPGVNRESSRCLAAAATSKYPSIT 302
LSS + L A ++ G +S G+N E RC+ TS Y S T
Sbjct: 183 LSSCLWDDSLGSAEKYSG-FESEGLNSEKGRCVTVNTTSGYWSST 226
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,791,138
Number of Sequences: 27780
Number of extensions: 258386
Number of successful extensions: 885
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -