Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0791.Seq
         (640 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.8  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   6.6  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   8.7  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   8.7  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   8.7  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   8.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = +1

Query: 436 CLRRWPLIKS*RYHLNR*R*PPSKKGDHRPT-THRTYRASG 555
           C  +WPL+ +   HL      P ++  + PT  + T R+ G
Sbjct: 524 CGMKWPLLSTINRHLRGNELLPMQQSQNPPTKPYGTCRSEG 564



 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 438  SSTVAVNKIITIPPEPLTVTT 500
            SST+A +    +P +P+T TT
Sbjct: 2289 SSTMAPSTTPMVPDKPVTTTT 2309


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = -3

Query: 335 SPQLRVDQVLPSGPNRANHVSVT 267
           SPQL     LP  PNR     VT
Sbjct: 476 SPQLSPMSSLPPYPNRTQITEVT 498


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 585 RGSVWPARVPHR 620
           R + +P RVPHR
Sbjct: 375 RSNKYPTRVPHR 386


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +2

Query: 542 IGLQGLNIRLISVNKRVGMAGESSSSLPPSDGV 640
           IGL  ++ +       V ++ +S+SSLPP + +
Sbjct: 204 IGLSKISPKESQDAANVKLSPKSASSLPPGNNI 236


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +2

Query: 542 IGLQGLNIRLISVNKRVGMAGESSSSLPPSDGV 640
           IGL  ++ +       V ++ +S+SSLPP + +
Sbjct: 152 IGLSKISPKESQDAANVKLSPKSASSLPPGNNI 184


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +2

Query: 542 IGLQGLNIRLISVNKRVGMAGESSSSLPPSDGV 640
           IGL  ++ +       V ++ +S+SSLPP + +
Sbjct: 335 IGLSKISPKESQDAANVKLSPKSASSLPPGNNI 367


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,815
Number of Sequences: 336
Number of extensions: 3710
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)