Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0791.Seq
         (640 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003200-1|AAO24955.1|  881|Drosophila melanogaster RE52776p pro...   106   2e-23
AE013599-2980|AAM68400.1|  881|Drosophila melanogaster CG11055-P...   106   2e-23
AE013599-2979|AAF57495.1|  881|Drosophila melanogaster CG11055-P...   106   2e-23
AE013599-2978|AAF57494.1|  881|Drosophila melanogaster CG11055-P...   106   2e-23

>BT003200-1|AAO24955.1|  881|Drosophila melanogaster RE52776p
           protein.
          Length = 881

 Score =  106 bits (255), Expect = 2e-23
 Identities = 44/67 (65%), Positives = 60/67 (89%)
 Frame = +3

Query: 288 SVWTGGQYLINPELRARRIVNISQSASIEFCKAFWFLAESEIMKRVPSLMSSTVAVNKII 467
           S+WT G+YL+NPELRARRIVNISQ+A I+FCK+FWFLAESE+M ++PS++ S++ VN++I
Sbjct: 253 SLWTSGKYLMNPELRARRIVNISQNAKIDFCKSFWFLAESEMMHKLPSIVGSSIKVNRLI 312

Query: 468 TIPPEPL 488
            +P EPL
Sbjct: 313 ELPAEPL 319



 Score = 72.9 bits (171), Expect = 3e-13
 Identities = 36/84 (42%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
 Frame = +1

Query: 10  EIESCGQLLASXXXXXXXXXXXXXXXXXXXXXXX-EHHTPEELFSQADTINQYCFYGRCL 186
           E+E+C QLL+S                         +HT E+LF   DTINQYCFYGRCL
Sbjct: 153 EVEACSQLLSSLCTCLQYLLILRQWSASTGDLFACGNHTAEQLFELGDTINQYCFYGRCL 212

Query: 187 GFQFIPSMRGILKGISICMAGFSK 258
           GFQ+  S+RG+L+ + I MA +S+
Sbjct: 213 GFQYGDSIRGVLRFLGISMASYSE 236


>AE013599-2980|AAM68400.1|  881|Drosophila melanogaster CG11055-PC,
           isoform C protein.
          Length = 881

 Score =  106 bits (255), Expect = 2e-23
 Identities = 44/67 (65%), Positives = 60/67 (89%)
 Frame = +3

Query: 288 SVWTGGQYLINPELRARRIVNISQSASIEFCKAFWFLAESEIMKRVPSLMSSTVAVNKII 467
           S+WT G+YL+NPELRARRIVNISQ+A I+FCK+FWFLAESE+M ++PS++ S++ VN++I
Sbjct: 253 SLWTSGKYLMNPELRARRIVNISQNAKIDFCKSFWFLAESEMMHKLPSIVGSSIKVNRLI 312

Query: 468 TIPPEPL 488
            +P EPL
Sbjct: 313 ELPAEPL 319



 Score = 72.9 bits (171), Expect = 3e-13
 Identities = 36/84 (42%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
 Frame = +1

Query: 10  EIESCGQLLASXXXXXXXXXXXXXXXXXXXXXXX-EHHTPEELFSQADTINQYCFYGRCL 186
           E+E+C QLL+S                         +HT E+LF   DTINQYCFYGRCL
Sbjct: 153 EVEACSQLLSSLCTCLQYLLILRQWSASTGDLFACGNHTAEQLFELGDTINQYCFYGRCL 212

Query: 187 GFQFIPSMRGILKGISICMAGFSK 258
           GFQ+  S+RG+L+ + I MA +S+
Sbjct: 213 GFQYGDSIRGVLRFLGISMASYSE 236


>AE013599-2979|AAF57495.1|  881|Drosophila melanogaster CG11055-PB,
           isoform B protein.
          Length = 881

 Score =  106 bits (255), Expect = 2e-23
 Identities = 44/67 (65%), Positives = 60/67 (89%)
 Frame = +3

Query: 288 SVWTGGQYLINPELRARRIVNISQSASIEFCKAFWFLAESEIMKRVPSLMSSTVAVNKII 467
           S+WT G+YL+NPELRARRIVNISQ+A I+FCK+FWFLAESE+M ++PS++ S++ VN++I
Sbjct: 253 SLWTSGKYLMNPELRARRIVNISQNAKIDFCKSFWFLAESEMMHKLPSIVGSSIKVNRLI 312

Query: 468 TIPPEPL 488
            +P EPL
Sbjct: 313 ELPAEPL 319



 Score = 72.9 bits (171), Expect = 3e-13
 Identities = 36/84 (42%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
 Frame = +1

Query: 10  EIESCGQLLASXXXXXXXXXXXXXXXXXXXXXXX-EHHTPEELFSQADTINQYCFYGRCL 186
           E+E+C QLL+S                         +HT E+LF   DTINQYCFYGRCL
Sbjct: 153 EVEACSQLLSSLCTCLQYLLILRQWSASTGDLFACGNHTAEQLFELGDTINQYCFYGRCL 212

Query: 187 GFQFIPSMRGILKGISICMAGFSK 258
           GFQ+  S+RG+L+ + I MA +S+
Sbjct: 213 GFQYGDSIRGVLRFLGISMASYSE 236


>AE013599-2978|AAF57494.1|  881|Drosophila melanogaster CG11055-PA,
           isoform A protein.
          Length = 881

 Score =  106 bits (255), Expect = 2e-23
 Identities = 44/67 (65%), Positives = 60/67 (89%)
 Frame = +3

Query: 288 SVWTGGQYLINPELRARRIVNISQSASIEFCKAFWFLAESEIMKRVPSLMSSTVAVNKII 467
           S+WT G+YL+NPELRARRIVNISQ+A I+FCK+FWFLAESE+M ++PS++ S++ VN++I
Sbjct: 253 SLWTSGKYLMNPELRARRIVNISQNAKIDFCKSFWFLAESEMMHKLPSIVGSSIKVNRLI 312

Query: 468 TIPPEPL 488
            +P EPL
Sbjct: 313 ELPAEPL 319



 Score = 72.9 bits (171), Expect = 3e-13
 Identities = 36/84 (42%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
 Frame = +1

Query: 10  EIESCGQLLASXXXXXXXXXXXXXXXXXXXXXXX-EHHTPEELFSQADTINQYCFYGRCL 186
           E+E+C QLL+S                         +HT E+LF   DTINQYCFYGRCL
Sbjct: 153 EVEACSQLLSSLCTCLQYLLILRQWSASTGDLFACGNHTAEQLFELGDTINQYCFYGRCL 212

Query: 187 GFQFIPSMRGILKGISICMAGFSK 258
           GFQ+  S+RG+L+ + I MA +S+
Sbjct: 213 GFQYGDSIRGVLRFLGISMASYSE 236


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,195,243
Number of Sequences: 53049
Number of extensions: 691176
Number of successful extensions: 1582
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1578
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)