Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0791.Seq
         (640 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin prepr...    28   0.066
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   1.9  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   1.9  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   1.9  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   1.9  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   4.4  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    22   5.8  

>AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin
           preprohormone protein.
          Length = 107

 Score = 28.3 bits (60), Expect = 0.066
 Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = -1

Query: 394 NQNALQN-SILADCDIFTIRLALNSGLIRYCPPVQTELITFP 272
           N+NA+Q+ ++ A+C++  +RL L   +         EL+ FP
Sbjct: 44  NRNAIQSDNVFANCELQKLRLLLQGNINNQLFQTPCELLNFP 85


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -1

Query: 418 FIISLSAKNQNALQNSILADCDIFTIRLALNSGLIR 311
           ++++LS +NQN L N +  +   F I  A  + LIR
Sbjct: 375 YLLALSDRNQNVLNNDLNLEHVNFQILGANVNDLIR 410


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -3

Query: 515 SPFFEGGHRQRFRWYRYDFINGHRRRHQTGDT 420
           +PFF+   +QR+ W +   + GH+   + G T
Sbjct: 229 TPFFQTYKKQRYPWVQ---LAGHQGNFRAGPT 257


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -3

Query: 515 SPFFEGGHRQRFRWYRYDFINGHRRRHQTGDT 420
           +PFF+   +QR+ W +   + GH+   + G T
Sbjct: 144 TPFFQTYKKQRYPWVQ---LAGHQGNFRAGPT 172


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -3

Query: 515 SPFFEGGHRQRFRWYRYDFINGHRRRHQTGDT 420
           +PFF+   +QR+ W +   + GH+   + G T
Sbjct: 463 TPFFQTYKKQRYPWVQ---LAGHQGNFRAGPT 491


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 171 EAILIYCVGLREQFFGCM 118
           E I   CVGL E+ F C+
Sbjct: 146 EVIYTACVGLLERAFRCL 163


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
 Frame = +2

Query: 101 CFP---PNIIHPKNCSLKPTQ*ISIAST 175
           C P   PN+I+P  C + P+  +  A T
Sbjct: 45  CLPFCGPNVINPFFCDMSPSLSLLCADT 72


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,832
Number of Sequences: 438
Number of extensions: 4359
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)