Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0790.Seq
(621 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0712 + 23803597-23803945,23804118-23805479,23805743-238058... 39 0.004
07_01_0062 - 457230-457339,457689-457962,458100-458195,459041-45... 36 0.026
01_06_1149 - 34901338-34901466,34901707-34901838,34901940-349022... 36 0.026
07_01_0061 - 451093-451377,451501-451596,451714-451824 32 0.32
03_01_0005 + 46370-46454,46962-47071,47381-47545,47672-48463,487... 32 0.42
02_04_0538 + 23739830-23740126,23740205-23740261,23740344-237404... 32 0.42
04_04_0237 + 23831949-23832354,23833970-23835166,23835274-238354... 31 0.97
06_03_1177 + 28174909-28175016,28176386-28176484,28177188-281772... 30 1.7
07_03_0498 + 18786732-18786869,18788048-18788143,18788301-18788588 29 2.3
01_01_0186 + 1598046-1598234,1599215-1599277,1599359-1599448,159... 29 2.3
02_02_0710 + 13173074-13173187,13173495-13173590,13174624-13174911 29 3.0
02_05_1314 - 35661824-35661912,35662031-35662454,35662689-356627... 29 3.9
10_08_0584 + 18971761-18971834,18971852-18973133,18973197-189745... 28 5.2
09_04_0327 + 16700235-16700312,16701756-16701978,16702488-167027... 28 5.2
07_01_1078 - 9707125-9707640,9708091-9708306,9708312-9709685,970... 28 5.2
03_02_0330 + 7502593-7504956,7505020-7506312,7522011-7522235 28 5.2
08_02_0098 - 12324664-12324822,12325430-12325543,12325649-123259... 28 6.9
06_03_1475 - 30391555-30391890,30391982-30392233,30392358-303926... 28 6.9
06_01_1019 - 7971606-7972077,7972550-7972752 28 6.9
11_04_0340 - 16536571-16536705,16536820-16536951,16537265-165381... 27 9.1
08_02_1102 + 24319569-24319917,24320120-24321496,24321819-243220... 27 9.1
06_03_0747 - 24119049-24119878,24120010-24120096,24120180-241202... 27 9.1
04_04_1357 + 32860677-32860781,32861484-32861588,32861678-328617... 27 9.1
>06_03_0712 +
23803597-23803945,23804118-23805479,23805743-23805811,
23806050-23806330,23806817-23807076,23807521-23807689,
23807796-23808068,23808251-23808499
Length = 1003
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/59 (37%), Positives = 33/59 (55%)
Frame = +2
Query: 269 LPNARVQSRPDPYLMVTVGKKTENTAVQLRTDDPVYEIGYSFLVQNPEIDTLDVKVLDQ 445
LP RV DP++ + +GK+ TAV RT P ++ +SFLV + L V VL++
Sbjct: 13 LPAVRVDGTSDPFVKLQLGKRRAKTAVARRTLAPAWDEEFSFLV-GDIAEELVVSVLNE 70
>07_01_0062 -
457230-457339,457689-457962,458100-458195,459041-459151
Length = 196
Score = 35.9 bits (79), Expect = 0.026
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Frame = +2
Query: 299 DPYLMVTVGKKTENTAVQLRTDDPVYEIGYSFLVQNPEIDTLDVKVLDQKTGS---QLGQ 469
DPY+++ + + T V +T +PV+ + V+NPE + ++V D+ T S Q+G
Sbjct: 27 DPYVVLHLDNQKLKTGVVKKTTNPVWNEELTLAVRNPE-TPIQLEVFDKDTFSKDDQMGD 85
Query: 470 LFYSISALLK 499
+ I AL++
Sbjct: 86 AEFDIEALMQ 95
>01_06_1149 -
34901338-34901466,34901707-34901838,34901940-34902290,
34902301-34902619,34902756-34902784,34903641-34903715,
34903799-34903900,34904002-34904120,34904752-34904875,
34904976-34905026,34905143-34905241,34905751-34905861
Length = 546
Score = 35.9 bits (79), Expect = 0.026
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Frame = +2
Query: 293 RPDPYLMVTVGKK---TENTAVQLRTDDPVYEIGYSFLVQNPEIDTLDVKVLD-QKTGSQ 460
+ DPY+ +T+ ++ T V+ +P + + F+V +PE L++KV D ++ +
Sbjct: 264 KSDPYVKLTMSDDKLPSKKTTVKRGNLNPEWNEDFKFVVTDPETQELEIKVFDWEQAWNS 323
Query: 461 LGQLFYSISALLKEKD 508
LF+S + L K D
Sbjct: 324 FVLLFFSCAMLPKTAD 339
>07_01_0061 - 451093-451377,451501-451596,451714-451824
Length = 163
Score = 32.3 bits (70), Expect = 0.32
Identities = 15/54 (27%), Positives = 33/54 (61%)
Frame = +2
Query: 299 DPYLMVTVGKKTENTAVQLRTDDPVYEIGYSFLVQNPEIDTLDVKVLDQKTGSQ 460
DPY+++ +GK+ T+V+ ++ +P++ + + NP I + + V D+ T S+
Sbjct: 27 DPYVVLRLGKQKVKTSVKKKSVNPIWHEELTLSIMNP-IAPIKLGVFDKDTFSR 79
>03_01_0005 + 46370-46454,46962-47071,47381-47545,47672-48463,
48730-48840,48935-49195,49415-49638,49735-49855,
50673-51214,51302-51488,51569-51895,52047-52197,
52287-52424,52918-53013,53276-53357,54411-54679,
54769-54882,55050-55288,55488-55715,55799-55951,
56479-56616,57061-57188,57598-57718,58142-58306,
59486-59633,59772-59898,60025-60118,60119-60268,
60577-60624,60712-60819,61040-61114,61225-61275,
61341-61487,61584-61714,61944-62031,62204-62266,
62336-62582,62830-62981,63056-63126,63214-63370,
63520-63687
Length = 2323
Score = 31.9 bits (69), Expect = 0.42
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +2
Query: 8 GTLGWAFRTM-ITSAGVHWTYLKLFDLAAWTLGRPCNKRTR*SPTEIILASFIH 166
G L ++ RT ++S G+ + + F ++W L CNKR R +P +L++ +H
Sbjct: 1575 GLLHFSMRTRNLSSLGISYEMMMQFVKSSWILHLSCNKR-RVAPIAALLSAVLH 1627
>02_04_0538 +
23739830-23740126,23740205-23740261,23740344-23740441,
23740565-23740640,23741316-23741345,23741833-23741961,
23742077-23742123,23742477-23742531,23742939-23743038,
23743568-23743674,23743760-23743906,23744232-23744378,
23744473-23744526,23744873-23744914
Length = 461
Score = 31.9 bits (69), Expect = 0.42
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +2
Query: 194 DGNSPYQDGRFELSSTLCLHNSCKK-LPNARVQSRPDPYLMVTVGKKTENTAVQLRTDDP 370
DG SP+ GR S + L C K L A + DPY +++ G++ +++ + +P
Sbjct: 104 DG-SPHSRGR--TSYVIKLELLCAKYLIGANLNGSSDPYAVISCGEQRRFSSMVPSSRNP 160
Query: 371 VYEIGYSFLVQNPEIDTLDVKVLDQK 448
++ ++FLV+ ++ V D K
Sbjct: 161 LWGEEFNFLVRELPVEFCTAPVNDSK 186
>04_04_0237 +
23831949-23832354,23833970-23835166,23835274-23835453,
23835537-23835823,23835912-23836029,23836354-23836483,
23836693-23836861,23836926-23836991,23837466-23837738,
23838131-23838349
Length = 1014
Score = 30.7 bits (66), Expect = 0.97
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2
Query: 299 DPYLMVTVGKKTENTAVQLRTDDPVYEIGYSFLVQNPEIDTLDVKVLD 442
DPY++ + T ++VQL+T DP + F TLDV+V +
Sbjct: 568 DPYVVFSCNGITRTSSVQLQTHDPQWNEIMEFDAMEEPPATLDVEVFN 615
>06_03_1177 +
28174909-28175016,28176386-28176484,28177188-28177238,
28177394-28177517,28177765-28177883,28177954-28178055,
28178124-28178198,28178390-28178466,28178920-28179169,
28179311-28179664,28179807-28179941,28180097-28180225
Length = 540
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/53 (24%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Frame = +2
Query: 293 RPDPYLMVTV-GKK--TENTAVQLRTDDPVYEIGYSFLVQNPEIDTLDVKVLD 442
+ DPY+ + + G+K ++ T++++ +P + + F+V++PE L++++ D
Sbjct: 280 KSDPYVKLRLSGEKLPSKKTSIKMSNLNPEWNEHFRFIVKDPETQILELRMFD 332
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 299 DPYLMVTVGKKTENTAVQLRTDDPVYEIGYSFLVQN-PEIDTLDVKVLDQKTGSQL 463
+PY +V + + T + +T DP + + F+V P D + ++V+ ++ G +L
Sbjct: 438 NPYAVVHFRGERKETKIIKKTRDPRWNEEFQFMVDEAPVDDKIHIEVVSKRRGLRL 493
>07_03_0498 + 18786732-18786869,18788048-18788143,18788301-18788588
Length = 173
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 299 DPYLMVTVGKKTENTAVQLRTDDPVYEIGYSFLVQNP 409
DPY++++ G + T+VQ + +PV+ V NP
Sbjct: 36 DPYVVLSYGPQKVKTSVQKKNSNPVWNEVLQLAVTNP 72
>01_01_0186 +
1598046-1598234,1599215-1599277,1599359-1599448,
1599968-1600093,1600583-1600726,1600845-1601255,
1601283-1601364,1601403-1601491,1602250-1602471,
1602552-1602827,1603116-1603253,1603772-1604077,
1604203-1604421
Length = 784
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = +2
Query: 179 VKSSTDGNSPYQDGRFELSSTLCLHNSCKKLPNARVQSRPDPYLMVTVGKKTENTAVQLR 358
+KS +G GR E + + + L A ++ DPY+ V G K + T V +
Sbjct: 555 IKSDFNGILKTSSGRVEATWIELVIIEARDLIAADLRGTSDPYVRVHYGSKKKRTKVVYK 614
Query: 359 TDDPVYEIGYSF 394
T P + + F
Sbjct: 615 TLSPDWNQTFEF 626
>02_02_0710 + 13173074-13173187,13173495-13173590,13174624-13174911
Length = 165
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/51 (27%), Positives = 30/51 (58%)
Frame = +2
Query: 299 DPYLMVTVGKKTENTAVQLRTDDPVYEIGYSFLVQNPEIDTLDVKVLDQKT 451
DPY++V +GK+ T V +T +P + + +++P + + ++V D+ T
Sbjct: 28 DPYVIVRMGKQKLKTRVIKKTTNPEWNDELTLSIEDPAV-PVRLEVYDKDT 77
>02_05_1314 -
35661824-35661912,35662031-35662454,35662689-35662787,
35662886-35662995,35663263-35663516,35664080-35664098,
35664834-35665075,35665662-35666401
Length = 658
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
Frame = +2
Query: 293 RPDPYLMVTVG------KKTENTAVQLRTDDPVYEIGYSFLVQNPEIDTLDVKVLD 442
+ DPY+++ +G KK T V + +P++ + LV NP L ++V D
Sbjct: 420 KTDPYVVMILGDQEIKSKKNSQTTVIGQPGEPIWNQDFHMLVANPRKQKLCIQVKD 475
>10_08_0584 +
18971761-18971834,18971852-18973133,18973197-18974509,
18993885-18993935,18994674-18994829,18995048-18995123,
18995317-18995364,18995445-18995489,18995580-18995679,
18995923-18995968,18996115-18996176,18996257-18996355,
18996536-18996609,18996721-18996790,18997074-18997162,
18997327-18997404
Length = 1220
Score = 28.3 bits (60), Expect = 5.2
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +3
Query: 42 PRQVFIGHISSCSIWPLGHLADLATSEHGKVQLRLSWHRLSTDVTELS 185
P Q IG ++ WPLGH+ DL + G R R++ DV +LS
Sbjct: 319 PSQPIIG-VTPGHTWPLGHI-DLLVTFGGSANFRT--ERVNFDVADLS 362
>09_04_0327 +
16700235-16700312,16701756-16701978,16702488-16702730,
16702815-16702865,16702965-16703225,16703319-16703371,
16703446-16703815,16703906-16704750
Length = 707
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 212 QDGRFELSSTLCLHNSCKKLPNARVQSRPDPYL 310
+ G F + S LC H LP+ RV + DP L
Sbjct: 100 EGGTFAMYSLLCRHADIGILPSKRVYAEEDPLL 132
>07_01_1078 -
9707125-9707640,9708091-9708306,9708312-9709685,
9709704-9710044,9710120-9710198
Length = 841
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
Frame = +3
Query: 63 HISSCSIWPLGHLADLATSEHGK----VQLRLSWHR 158
HIS +WP GH+ +SE K L WHR
Sbjct: 766 HISYVDLWPNGHIISRGSSELAKSLAGYCLECRWHR 801
>03_02_0330 + 7502593-7504956,7505020-7506312,7522011-7522235
Length = 1293
Score = 28.3 bits (60), Expect = 5.2
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +3
Query: 42 PRQVFIGHISSCSIWPLGHLADLATSEHGKVQLRLSWHRLSTDVTELS 185
P Q IG ++ WPLGH+ DL + G R R++ DV +LS
Sbjct: 655 PSQPIIG-VTPGHTWPLGHI-DLLVTFGGSANFRT--ERVNFDVADLS 698
>08_02_0098 -
12324664-12324822,12325430-12325543,12325649-12325921,
12326124-12326354,12326444-12326594,12326680-12326759,
12326839-12326913,12326992-12327093,12328000-12328121,
12329726-12329791,12330158-12330201,12330850-12330898,
12330967-12331087,12334631-12334735
Length = 563
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 37 DYLGRCSLDISQVVRFGRLDTWQTLQQANTVKSN 138
DY+GRC L +++V+ G LQ A + K N
Sbjct: 512 DYIGRCILTLTRVILEGEFQDEFVLQGAKSGKLN 545
>06_03_1475 -
30391555-30391890,30391982-30392233,30392358-30392619,
30393232-30393320,30393408-30393592,30393673-30393781,
30393886-30393942,30394047-30394196
Length = 479
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 295 SGSLPDGDGWQKNRKHRR 348
+GSL D G +K+RKHRR
Sbjct: 430 NGSLSDNSGQKKSRKHRR 447
>06_01_1019 - 7971606-7972077,7972550-7972752
Length = 224
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 310 DGDGWQKNRKHRRATANRRSRV 375
D DGWQ +R H R R R+
Sbjct: 20 DADGWQDHRGHSRVAMPREERI 41
>11_04_0340 - 16536571-16536705,16536820-16536951,16537265-16538106,
16538480-16538940,16539032-16540314,16540423-16541627,
16541857-16542157
Length = 1452
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 395 LVQNPEIDTLDVKVLDQKTGSQLGQLFYSISAL 493
L +P ++ LD+ L K S+L QLF +I+AL
Sbjct: 1152 LQPHPSLEELDISNLTDKDQSRLLQLFPTITAL 1184
>08_02_1102 +
24319569-24319917,24320120-24321496,24321819-24322001,
24322147-24322460,24322515-24322631,24323057-24323313,
24323504-24323684,24323802-24324074,24324535-24324729
Length = 1081
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +2
Query: 299 DPYLMVTVGKKTENTAVQLRTDDPVYEIGYSFLVQNPEIDTLDVKVLDQ 445
DPY+ + +GK+ T V + +P ++ +SF V + D L + V D+
Sbjct: 23 DPYVKLQLGKQRFKTKVVKKNLNPAWDQEFSFSVGDVR-DVLKLYVYDE 70
>06_03_0747 -
24119049-24119878,24120010-24120096,24120180-24120285,
24120400-24120593,24120663-24120906,24120982-24121060,
24121148-24121227,24122181-24122276,24122372-24122443,
24122534-24122731,24123050-24123252,24123376-24123895
Length = 902
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 146 ILASFIHGCN*VKSSTDGNSPYQDGRFELSST 241
+LA HG VK+S D NS G +E+++T
Sbjct: 644 LLAGLTHGNQTVKTSNDSNSGLTPGVWEVNAT 675
>04_04_1357 +
32860677-32860781,32861484-32861588,32861678-32861728,
32861829-32861949,32862495-32862616,32863032-32863133,
32863226-32863300,32863391-32863470,32863601-32863751,
32863850-32864080,32864221-32864517,32864638-32864751,
32864857-32865030
Length = 575
Score = 27.5 bits (58), Expect = 9.1
Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +2
Query: 263 KKLPNARVQSRPDPYLMVTVGKKTENT--AVQLRTD-DPVYEIGYSFLVQNPEIDTLDVK 433
+ L N + + DP+ +V V + + + D +P++ + F+V++ + T+ VK
Sbjct: 272 RDLTNKDLIGKSDPFAIVYVRPLPDKMKRSKTINNDLNPIWNEHFEFIVEDADTQTVTVK 331
Query: 434 VLDQKTGSQLGQLFYSISALLKE 502
+ D G Q +L LK+
Sbjct: 332 IYDD-DGIQESELIGCAQVTLKD 353
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,010,717
Number of Sequences: 37544
Number of extensions: 349966
Number of successful extensions: 980
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1502076244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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