Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0790.Seq
(621 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g19830.1 68416.m02512 C2 domain-containing protein low simila... 35 0.038
At3g61300.1 68416.m06860 C2 domain-containing protein anthranila... 34 0.066
At5g50170.1 68418.m06213 C2 domain-containing protein / GRAM dom... 33 0.12
At1g03370.1 68414.m00316 C2 domain-containing protein / GRAM dom... 31 0.47
At4g00700.1 68417.m00096 C2 domain-containing protein contains I... 31 0.62
At1g50260.1 68414.m05635 C2 domain-containing protein low simila... 30 1.4
At2g25630.1 68415.m03072 glycosyl hydrolase family 1 protein con... 29 1.9
At1g64670.1 68414.m07331 hydrolase, alpha/beta fold family prote... 29 1.9
At5g11100.1 68418.m01296 C2 domain-containing protein similar to... 29 2.5
At5g48060.1 68418.m05938 C2 domain-containing protein contains I... 29 3.3
At5g47710.1 68418.m05891 C2 domain-containing protein contains s... 29 3.3
At1g05500.1 68414.m00561 C2 domain-containing protein similar to... 29 3.3
At2g25730.1 68415.m03084 expressed protein 28 4.3
At2g02780.1 68415.m00221 leucine-rich repeat transmembrane prote... 28 4.3
At5g12970.1 68418.m01487 C2 domain-containing protein contains I... 28 5.7
At3g59850.1 68416.m06679 polygalacturonase, putative / pectinase... 28 5.7
At1g70250.1 68414.m08082 receptor serine/threonine kinase, putat... 28 5.7
At4g29690.1 68417.m04229 type I phosphodiesterase/nucleotide pyr... 27 7.6
>At3g19830.1 68416.m02512 C2 domain-containing protein low
similarity to GLUT4 vesicle protein [Rattus norvegicus]
GI:4193489; contains Pfam profile PF00168: C2 domain
Length = 666
Score = 35.1 bits (77), Expect = 0.038
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Frame = +2
Query: 227 ELSSTLCLHNSCKKLPNARVQSRPDPYLMVTVG------KKTENTAVQLRTDDPVYEIGY 388
ELS TL + +KLP + DPY+++ +G KK T V P++ +
Sbjct: 387 ELSVTLV---NAQKLPYM-FSGKTDPYVILRIGDQVIRSKKNSQTTVIGAPGQPIWNQDF 442
Query: 389 SFLVQNPEIDTLDVKVLD 442
FLV NP L ++V D
Sbjct: 443 QFLVSNPREQVLQIEVND 460
>At3g61300.1 68416.m06860 C2 domain-containing protein anthranilate
phosphoribosyltransferase (fragment) - Pisum sativum,
PIR:T06460
Length = 972
Score = 34.3 bits (75), Expect = 0.066
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +2
Query: 263 KKLPNARVQSRPDPYLMVTVGKKTENTAVQLRTDDPVYEIGYSFLVQNPEIDTLDVKVLD 442
+ LP+ + DPY+ V +G T T + +PV+ ++F N + + L+V V+D
Sbjct: 259 RNLPSMDLTGSLDPYIEVKLGNYTGKTKHFEKNQNPVWNEVFAFSKSNQQSNVLEVIVMD 318
Query: 443 Q 445
+
Sbjct: 319 K 319
>At5g50170.1 68418.m06213 C2 domain-containing protein / GRAM
domain-containing protein low similarity to SP|P40748
Synaptotagmin III (SytIII) {Rattus norvegicus}; contains
Pfam profiles PF00168: C2 domain, PF02893: GRAM domain
Length = 1027
Score = 33.5 bits (73), Expect = 0.12
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 299 DPYLMVTVGKKTENTAVQLRTDDPVYEIGYSFLVQNPEIDTLDVKVLD 442
DPY++ T KT ++V+L+ DP + F LDV+V D
Sbjct: 561 DPYVVFTCNGKTRTSSVKLQAQDPQWNEVIEFDAMEEPPSVLDVEVFD 608
>At1g03370.1 68414.m00316 C2 domain-containing protein / GRAM
domain-containing protein contains Pfam profiles PF00168:
C2 domain; contains PF02893: GRAM domain; similar to
Chain A, Crystal Structure Of Synaptotagmin Iii C2aC2B
Length(GI:6980525); similar to Synaptotagmin III (SytIII)
(Swiss-Prot:P40748) [Rattus norvegicus]
Length = 1859
Score = 31.5 bits (68), Expect = 0.47
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +2
Query: 263 KKLPNARVQSRPDPYLMVTVGKKTENTAVQLRTDDPVYEIGYSFLVQNPEIDTLDVKVLD 442
+ LP + DPY+ + +GK+ T V + +P + +SF V + D L V VLD
Sbjct: 837 RNLPAMDLNGFSDPYVRLQLGKQRSRTKVVKKNLNPKWTEDFSFGVDDLN-DELVVSVLD 895
Query: 443 Q 445
+
Sbjct: 896 E 896
>At4g00700.1 68417.m00096 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 1006
Score = 31.1 bits (67), Expect = 0.62
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +2
Query: 263 KKLPNARVQSRPDPYLMVTVGKKTENTAVQLRTDDPVYEIGYSFLVQNPEIDTLDVKVLD 442
+ LPN + DPY++V +G T + DP + ++F N + + L+V V D
Sbjct: 278 RDLPNKDLTGSLDPYVVVKIGNFKGVTTHFNKNTDPEWNQVFAFAKDNLQSNFLEVMVKD 337
Query: 443 Q 445
+
Sbjct: 338 K 338
>At1g50260.1 68414.m05635 C2 domain-containing protein low
similarity to CLB1 [Lycopersicon esculentum] GI:2789434;
contains Pfam profile PF00168: C2 domain
Length = 675
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
Frame = +2
Query: 293 RPDPYLMVTVG------KKTENTAVQLRTDDPVYEIGYSFLVQNPEIDTLDVKVLDQ 445
+ DPY ++ +G K+ T V P++ + FLV NP L ++V D+
Sbjct: 420 KTDPYAILRLGDQVIRSKRNSQTTVIGAPGQPIWNQDFQFLVSNPREQVLQIEVNDR 476
>At2g25630.1 68415.m03072 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
similar to amygdalin hydrolase isoform AH I precursor
(GI:16757966) [Prunus serotina]
Length = 489
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +1
Query: 46 GRCSLDISQVVRFGRLDTWQTLQQANTVKSN*DYLGIVY 162
G+ +D+ V+ GRL T+ T +Q+N +K + D++GI Y
Sbjct: 305 GKYPVDMVNNVKGGRLPTF-TSKQSNMLKGSYDFIGINY 342
>At1g64670.1 68414.m07331 hydrolase, alpha/beta fold family protein
low similarity to
2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolase
[Pseudomonas putida] GI:2822275; contains Pfam profile
PF00561: hydrolase, alpha/beta fold family
Length = 469
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 209 YQDGRFELSSTLCLHNSCKKLPNARVQSRPD-PYLMVTVGKKTE 337
+ GR EL C + +K+P AR+ PD ++ + VG++ E
Sbjct: 405 FHGGRDELIPVECSYGVKRKVPRARIHVVPDKDHITIVVGRQKE 448
>At5g11100.1 68418.m01296 C2 domain-containing protein similar to
Ca2+-dependent lipid-binding protein (CLB1) GI:2789434
from [Lycopersicon esculentum]
Length = 574
Score = 29.1 bits (62), Expect = 2.5
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = +2
Query: 263 KKLPNARVQSRPDPYLMVTVGK---KTENTAVQLRTDDPVYEIGYSFLVQNPEIDTLDVK 433
K L N + + DPY +V + +T+ T + +P++ + F+V++ L V+
Sbjct: 281 KDLANKDMIGKSDPYAIVFIRPLPDRTKKTKTISNSLNPIWNEHFEFIVEDVSTQHLTVR 340
Query: 434 VLDQKTGSQLGQLFYSISALLKE 502
V D + G QL + L E
Sbjct: 341 VFDDE-GVGSSQLIGAAQVPLNE 362
>At5g48060.1 68418.m05938 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 1036
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 263 KKLPNARVQSRPDPYLMVTVGKKTENTAV-QLRTDDPVYEIGYSFLVQNPEIDTLDVKVL 439
K+LP + DPY+ V +G T + +T P + ++F + + L+V V
Sbjct: 304 KELPPGSITGGCDPYVEVKLGNYKGRTKIFDRKTTIPEWNQVFAFTKERIQSSVLEVFVK 363
Query: 440 DQKT 451
D++T
Sbjct: 364 DKET 367
>At5g47710.1 68418.m05891 C2 domain-containing protein contains
similarity to CLB1 [Lycopersicon esculentum] GI:2789434;
contains Pfam profile PF00168: C2 domain
Length = 166
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +2
Query: 299 DPYLMVTVGKKTENTAVQLRTDDPVYEIGYSFLVQNPEIDTLDVKVLDQ---KTGSQLGQ 469
DPY++V +G ++ T V +PV+ +F +++P L ++V D+ K ++G
Sbjct: 27 DPYVIVKLGNESAKTKVINNCLNPVWNEELNFTLKDPAA-VLALEVFDKDRFKADDKMGH 85
Query: 470 LFYSISALL 496
S+ L+
Sbjct: 86 ASLSLQPLI 94
>At1g05500.1 68414.m00561 C2 domain-containing protein similar to
Ca2+-dependent lipid-binding protein (CLB1) GI:2789434
from [Lycopersicon esculentum]
Length = 528
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 37 DYLGRCSLDISQVVRFGRLDTWQTLQQANTVK 132
DY+GRC L +++V+ W L ++ T K
Sbjct: 481 DYIGRCILTLTRVIMEEEYKDWYPLDESKTGK 512
>At2g25730.1 68415.m03084 expressed protein
Length = 2464
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 365 DPVYEIGYSFLVQNPEIDT-LDVKVLDQKTGSQLGQLFYSISALLKEKD 508
D Y + Y F + +I + + D+K GSQL +LF +I +++ D
Sbjct: 2330 DLAYSVIYEFKLSAVDIYAGVATSLADRKKGSQLTELFKNIKGTIQDDD 2378
>At2g02780.1 68415.m00221 leucine-rich repeat transmembrane protein
kinase, putative
Length = 753
Score = 28.3 bits (60), Expect = 4.3
Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Frame = +3
Query: 93 GHLADLATSEHGKVQLRLSWHRLSTDVTELS--RALTETLLIKTGDLSSAVLS 245
GH+ +L + + +L S+H+L T +T+LS + L+ T L +G LS +++
Sbjct: 75 GHVTELTVTGNRTSKLSGSFHKLFTLLTQLSSLKTLSLTSLGISGSLSPKIIT 127
>At5g12970.1 68418.m01487 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 769
Score = 27.9 bits (59), Expect = 5.7
Identities = 18/81 (22%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +2
Query: 263 KKLPNARVQSRPDPYLMVTVGKKTENTAVQLRTDDPVYEIGYSFLVQNPEIDTLDVKVLD 442
K+LP V DPY+ V +G T + +P ++ ++F + + L+V V D
Sbjct: 50 KELPGKDVTGSCDPYVEVKLGNYRGMTKHFEKRSNPEWKQVFAFSKERIQASILEVVVKD 109
Query: 443 QKT--GSQLGQLFYSISALLK 499
+ +G++ + ++ + K
Sbjct: 110 KDVVLDDLIGRIMFDLNEIPK 130
>At3g59850.1 68416.m06679 polygalacturonase, putative / pectinase,
putative similar to SP|P48979 Polygalacturonase
precursor (EC 3.2.1.15) (PG) (Pectinase) {Prunus
persica}; contains PF00295: Glycosyl hydrolases family
28 (polygalacturonases)
Length = 388
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 179 VKSSTDGNSPYQDG-RFELSSTLCLHNS 259
VK S DGNSP DG + SST+ + NS
Sbjct: 181 VKVSADGNSPNTDGIHVQSSSTVSILNS 208
>At1g70250.1 68414.m08082 receptor serine/threonine kinase, putative
similar to to receptor serine/threonine kinase PR5K
gi|1235680|gb|AAC49208
Length = 799
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1
Query: 462 SWLPVFWSRTLTSSVSISGF 403
SW+ FW RTL S+ S GF
Sbjct: 188 SWIGRFWGRTLCSTNSTGGF 207
>At4g29690.1 68417.m04229 type I phosphodiesterase/nucleotide
pyrophosphatase family protein similar to SP|P22413
Ectonucleotide pyrophosphatase/phosphodiesterase 1
(Plasma-cell membrane glycoprotein PC-1) [Includes:
Alkaline phosphodiesterase I (EC 3.1.4.1); Nucleotide
pyrophosphatase (EC 3.6.1.9) {Homo sapiens}; contains
Pfam profile PF01663: Type I phosphodiesterase /
nucleotide pyrophosphatase
Length = 457
Score = 27.5 bits (58), Expect = 7.6
Identities = 21/77 (27%), Positives = 30/77 (38%)
Frame = +2
Query: 224 FELSSTLCLHNSCKKLPNARVQSRPDPYLMVTVGKKTENTAVQLRTDDPVYEIGYSFLVQ 403
++LS T+ + S N P Y+ K N V L + GY F +
Sbjct: 17 YKLSLTVLIVLSVAVTANG--SDSPSSYVRRPQPPKKLNKPVVLLISCDGFRFGYQFKTE 74
Query: 404 NPEIDTLDVKVLDQKTG 454
P ID L + + KTG
Sbjct: 75 TPNIDLLISRGTEAKTG 91
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,516,259
Number of Sequences: 28952
Number of extensions: 272610
Number of successful extensions: 824
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 824
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1255974912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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