Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0786.Seq
(748 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0791 - 24641350-24641418,24641684-24641965,24642318-246425... 106 2e-23
02_05_0182 + 26530799-26530852,26531677-26532927,26533250-265333... 49 5e-06
10_08_0343 - 16960764-16960895,16961166-16961171,16961272-169616... 36 0.045
03_01_0269 + 2080338-2080508,2081086-2081335,2081432-2082648,208... 34 0.10
08_01_0927 - 9123473-9123589,9124534-9124616,9125177-9125252,912... 32 0.56
09_04_0038 - 13996505-13996836,13997047-13997077,13997307-139974... 31 0.97
03_02_0459 + 8649448-8651994 31 0.97
12_02_0797 - 23230441-23230757,23230922-23231069,23231352-232325... 31 1.3
03_02_0044 - 5245204-5245538,5245946-5246093,5246182-5247395,524... 31 1.3
02_03_0272 - 17146578-17146691,17146806-17146926,17147260-171473... 30 2.2
06_03_0054 - 16038103-16038251,16038256-16038619 29 3.9
06_03_1131 + 27872870-27872958,27873036-27873281,27874058-278741... 29 5.2
06_01_0084 + 675185-677389 29 5.2
02_05_0222 - 26941005-26942702 29 5.2
01_05_0712 - 24531654-24531874,24532438-24532538,24532621-245327... 29 5.2
07_03_0358 - 17177253-17177369,17177635-17177931,17178961-171790... 28 6.9
07_01_0358 - 2631214-2632992 28 6.9
01_05_0709 + 24480660-24481796 28 6.9
09_04_0327 + 16700235-16700312,16701756-16701978,16702488-167027... 28 9.1
05_07_0255 + 28703799-28705703 28 9.1
03_02_0805 + 11382631-11384747,11385012-11385095,11385181-11385376 28 9.1
>06_03_0791 -
24641350-24641418,24641684-24641965,24642318-24642537,
24642657-24642776,24643056-24643132,24643220-24643339,
24644121-24644186,24644265-24644479,24645450-24645582,
24646562-24646708,24647301-24647596,24648222-24648319,
24648425-24648471,24649340-24649449,24649663-24649735,
24650795-24650899
Length = 725
Score = 106 bits (255), Expect = 2e-23
Identities = 48/82 (58%), Positives = 61/82 (74%)
Frame = +1
Query: 256 GMEIYSTCLWHLQREAQLSALAQELVELNRTNPIAWLVAGNCFSLHKERETALKFFRRAV 435
GM+IYST L+HL E +LS LAQ+LV ++R +P AW GNCF+L K+ ETALK F+RAV
Sbjct: 461 GMDIYSTVLYHLNEEMRLSYLAQDLVSIDRLSPQAWCAVGNCFALRKDHETALKNFQRAV 520
Query: 436 QLNPDAAYAHALLGHEYAVAEE 501
QL+ AYAH L GHEY+ E+
Sbjct: 521 QLDSRVAYAHTLCGHEYSALED 542
Score = 73.3 bits (172), Expect = 2e-13
Identities = 32/69 (46%), Positives = 46/69 (66%)
Frame = +3
Query: 534 VSIDPRNYVAWFGIATVYARQERWKASEVHIRRALSIHPLSGVLRCQLGLAQSALGKMER 713
+ +D R+Y AW+G+ VY RQE+++ +E H RRA I+P S VL C LG+A AL + E
Sbjct: 554 LQVDERHYNAWYGLGVVYLRQEKFEFAEHHFRRAFQINPCSSVLMCYLGMALHALKRNEE 613
Query: 714 ALSTLEKAV 740
AL +E A+
Sbjct: 614 ALEMMENAI 622
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/74 (27%), Positives = 39/74 (52%)
Frame = +2
Query: 38 LLSLMKEIGEAYKYLAFLDCKNAIKSFQELPPKQLASPWVQTMIARSHYELAQYEAAAKI 217
L++L++ +GE Y+ C+ A++ +++LP Q + WV + ++++EL Y A
Sbjct: 388 LMALLRTLGEGYRLSCLFKCQEALEVYRKLPEAQFNTGWVLCQVGKTYFELVNYLEADHF 447
Query: 218 FSEIRKQYPNRTEG 259
F + P EG
Sbjct: 448 FELAHRLSPCTLEG 461
>02_05_0182 +
26530799-26530852,26531677-26532927,26533250-26533335,
26533673-26533733
Length = 483
Score = 48.8 bits (111), Expect = 5e-06
Identities = 24/82 (29%), Positives = 44/82 (53%)
Frame = +1
Query: 259 MEIYSTCLWHLQREAQLSALAQELVELNRTNPIAWLVAGNCFSLHKERETALKFFRRAVQ 438
M++YS L+ + LS LA + ++ P + + N +SL + E ++ +F+RA++
Sbjct: 193 MDVYSNLLYAKESSTALSFLAHRVFLTDKYRPESCCIIANYYSLKGQHEKSVLYFQRALK 252
Query: 439 LNPDAAYAHALLGHEYAVAEET 504
LN A L+GHE+ + T
Sbjct: 253 LNRKYLSAWTLMGHEFVELKNT 274
Score = 33.1 bits (72), Expect = 0.24
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = +1
Query: 322 QELVELNRTNPIAWLVAGNCFSLHKERETALKFFRRAVQLNPDAAYAHALLGHEY 486
Q ++LNR AW + G+ F K A+ +RRAV +NP A LG Y
Sbjct: 248 QRALKLNRKYLSAWTLMGHEFVELKNTPAAIDAYRRAVDINPRDYRAWYGLGQIY 302
Score = 28.7 bits (61), Expect = 5.2
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +3
Query: 534 VSIDPRNYVAWFGIATVY 587
V I+PR+Y AW+G+ +Y
Sbjct: 285 VDINPRDYRAWYGLGQIY 302
>10_08_0343 -
16960764-16960895,16961166-16961171,16961272-16961640,
16962118-16962304,16962567-16962759,16962864-16963137,
16963215-16963374,16963985-16964199,16964784-16964876,
16965192-16965260,16965293-16965445,16965534-16965737,
16966416-16966691,16967336-16967431,16967585-16967788,
16967877-16968069,16968229-16968374,16968771-16969425,
16971462-16971774,16971989-16972139,16972602-16973815,
16973933-16974182,16974784-16975035
Length = 1934
Score = 35.5 bits (78), Expect = 0.045
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +3
Query: 564 WFGIATVYARQERWKASEVHIRRALSIHPLSGVLRCQLGLAQSALGKMERALSTLEKAVA 743
W+ +A +Y R +W+ +EV + + +I P S + G A G+ + AL + +A+
Sbjct: 585 WYDLALLYLRMSQWRDAEVCVSKIRTISPYSALAWHVKGKLYEAKGQPKEALGSYFRALD 644
Query: 744 L 746
L
Sbjct: 645 L 645
>03_01_0269 +
2080338-2080508,2081086-2081335,2081432-2082648,
2082933-2083083,2083247-2083563
Length = 701
Score = 34.3 bits (75), Expect = 0.10
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +3
Query: 564 WFGIATVYARQERWKASEVHIRRALSIHPLSGVLRCQLGLAQSALGKMERALSTLEKAVA 743
W+ + +Y R +W+ +E+ I + +I P S + G A G ++ AL A+
Sbjct: 559 WYDLVLLYIRMSQWRDAELSISKIKAISPYSALAFHATGKLHEAKGFLKEALRAYSTALD 618
Query: 744 L 746
L
Sbjct: 619 L 619
>08_01_0927 -
9123473-9123589,9124534-9124616,9125177-9125252,
9125641-9125740,9125996-9126064,9126122-9126207,
9126293-9126430,9126688-9126810,9128130-9129719,
9129929-9130402
Length = 951
Score = 31.9 bits (69), Expect = 0.56
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = +1
Query: 277 CLWHLQREAQLSALAQELVELNRTNPIA--W--LVAGNCFSLHKERETALKFFRRAVQLN 444
C+ L L A+E+VE P A W L+AG F HK E A + ++L
Sbjct: 485 CMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRF--HKNVELAEYVVKHWIELE 542
Query: 445 PDAAYAHALLGHEYAVA 495
PD + A+ LLG+ YA +
Sbjct: 543 PDKSGAYVLLGNIYAAS 559
>09_04_0038 -
13996505-13996836,13997047-13997077,13997307-13997420,
13997546-13997686,13997787-13997851,13997943-13998039,
13998096-13998257,13998360-13998473,14001263-14001311,
14001967-14002047,14003504-14003561,14003671-14004031,
14004129-14004213,14004320-14004591,14004712-14004914,
14005419-14005494
Length = 746
Score = 31.1 bits (67), Expect = 0.97
Identities = 19/71 (26%), Positives = 35/71 (49%)
Frame = +3
Query: 534 VSIDPRNYVAWFGIATVYARQERWKASEVHIRRALSIHPLSGVLRCQLGLAQSALGKMER 713
+ ++P + +A+ A ++ + ++ A+ AL I+P S G+A++ LGK E
Sbjct: 506 IVLNPTSAIAYATRAVIFVKSKKPNAAIRDADAALKINPDSAKGYKSRGMAKAMLGKWEE 565
Query: 714 ALSTLEKAVAL 746
A L A L
Sbjct: 566 AAQDLRMAAKL 576
>03_02_0459 + 8649448-8651994
Length = 848
Score = 31.1 bits (67), Expect = 0.97
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 603 WKASEVHIRRALSIHPLSGVLRCQLGLAQSALGKMERALSTLEKAVAL 746
++A+E + A+ + P C LG A A+G +RA+ +KA+ L
Sbjct: 400 YRAAEKALEEAIFLKPDYADAHCDLGSALHAIGDDDRAVQEFQKAIDL 447
>12_02_0797 -
23230441-23230757,23230922-23231069,23231352-23232562,
23232639-23232894,23234073-23234309
Length = 722
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/63 (22%), Positives = 31/63 (49%)
Frame = +3
Query: 555 YVAWFGIATVYARQERWKASEVHIRRALSIHPLSGVLRCQLGLAQSALGKMERALSTLEK 734
+ W G+A +YA W+ +E+ +++A ++ S + G + + + AL+
Sbjct: 577 FEVWQGLANLYASLSYWRDAEICLQKAKALKSFSAITLHAEGYTREVREQTQDALAAYFN 636
Query: 735 AVA 743
AV+
Sbjct: 637 AVS 639
>03_02_0044 -
5245204-5245538,5245946-5246093,5246182-5247395,
5247730-5248003,5248141-5248293
Length = 707
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +3
Query: 561 AWFGIATVYARQERWKASEVHIRRALSIHPLSGVLRCQLGLAQSALGKMERALSTLEKAV 740
AW +A++Y + E W S V + +A SI S GL A + AL+ ++
Sbjct: 558 AWLDLASIYTKLESWHDSNVCLDKAKSISSFSPKCCHVRGLILQAQSLHQEALTAFSLSL 617
Query: 741 AL 746
++
Sbjct: 618 SI 619
>02_03_0272 -
17146578-17146691,17146806-17146926,17147260-17147365,
17147469-17147551,17147688-17147815,17147897-17147983,
17148064-17148174,17148502-17148669,17148753-17148837,
17148921-17149037,17149127-17149203,17149299-17149370,
17150538-17150634,17150750-17150952,17151115-17151217,
17151324-17151391,17151461-17151514,17151595-17151704,
17151982-17152060,17152171-17152233,17153410-17153529,
17153913-17153969,17154071-17154187,17156426-17156476,
17156591-17156689,17156787-17156935,17158090-17158312
Length = 953
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +1
Query: 322 QELVELNRTNPIAWLVAGNCFSLHKERETALKFFRRAVQLNPDAAYAHALLGHEY 486
+E V+L + A+L GN + + A+ ++RAVQ PD A A+ L Y
Sbjct: 272 KEAVKLKPSFADAYLNQGNVYKTMGMSQEAIISYQRAVQARPDYAMAYGNLATIY 326
>06_03_0054 - 16038103-16038251,16038256-16038619
Length = 170
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/56 (23%), Positives = 25/56 (44%)
Frame = +2
Query: 92 DCKNAIKSFQELPPKQLASPWVQTMIARSHYELAQYEAAAKIFSEIRKQYPNRTEG 259
+C NAI + + K P + I R H++ A Y+ A + ++ + + G
Sbjct: 31 ECSNAILHWLQEKKKDPGCPTITCSIGRQHFDQALYDLGASVSVTPKEVFDKQLHG 86
>06_03_1131 +
27872870-27872958,27873036-27873281,27874058-27874163,
27874665-27875209,27875455-27875914,27876234-27876319,
27877092-27877194
Length = 544
Score = 28.7 bits (61), Expect = 5.2
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +3
Query: 534 VSIDPRNYVAWFGIATVY 587
V I+PR+Y AW+G+ +Y
Sbjct: 332 VDINPRDYRAWYGLGQIY 349
>06_01_0084 + 675185-677389
Length = 734
Score = 28.7 bits (61), Expect = 5.2
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Frame = +1
Query: 256 GMEIYSTCLWHLQREAQLSALAQELVELNRTNP---IAWLVAGNCFSLHKERETALKFFR 426
GME Y T + L R +L A ++ +P + + G C LHK E A + +
Sbjct: 499 GMEHYGTMVDLLGRAGKLDE-AWAFIQKMPMDPGLSVYGAMLGAC-KLHKNVELAEESAQ 556
Query: 427 RAVQLNPDAAYAHALLGHEYAVA 495
+ +L P H LL + YA A
Sbjct: 557 KIFELGPQEGVYHVLLANIYANA 579
>02_05_0222 - 26941005-26942702
Length = 565
Score = 28.7 bits (61), Expect = 5.2
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 3/97 (3%)
Frame = +1
Query: 217 IFRNKKTVSKSY*GMEIYSTCLWHLQREAQLSALAQELVELNRTNPIA--W-LVAGNCFS 387
+F++ + V E YS + L R ++ A L++ P W + G C
Sbjct: 433 VFKDMRNVHGLMPNGEHYSCLVDMLGRAGRIEE-AHRLIQDMPFEPSTSVWGALLGACV- 490
Query: 388 LHKERETALKFFRRAVQLNPDAAYAHALLGHEYAVAE 498
LHK E +R QL+P+ ++ LLG+ YA A+
Sbjct: 491 LHKNVEFGEVAAKRLFQLDPENTGSYVLLGNIYAAAD 527
>01_05_0712 -
24531654-24531874,24532438-24532538,24532621-24532716,
24532951-24533048,24533827-24533883,24534764-24534895,
24535042-24535155,24535227-24535359,24535448-24535678,
24535761-24535843,24536009-24536137,24536504-24536599,
24536719-24536773,24537316-24537386,24537472-24537525,
24537691-24537768,24537985-24538117,24539381-24539496,
24539580-24539651,24540113-24540218,24540657-24540772,
24541170-24541319,24541410-24541492,24541591-24541669,
24542645-24542695
Length = 884
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/54 (22%), Positives = 30/54 (55%)
Frame = +1
Query: 289 LQREAQLSALAQELVELNRTNPIAWLVAGNCFSLHKERETALKFFRRAVQLNPD 450
+ R+++ L + ++ + + + W V G + +E A+K +R A++++PD
Sbjct: 56 MDRKSEAYELVRRGLKNDLKSHVCWHVYGLLYRSDREYREAIKCYRNALRIDPD 109
>07_03_0358 -
17177253-17177369,17177635-17177931,17178961-17179032,
17179117-17179383,17179752-17179910,17180194-17180295,
17180696-17180767,17181105-17181200,17181710-17181871,
17181941-17182021,17182837-17183094,17183173-17183275,
17183412-17183542,17184827-17184919,17184999-17185099,
17186271-17186355,17186487-17186701,17186779-17186842,
17187128-17187214,17188922-17189022,17190206-17190397,
17190533-17190599,17191211-17191351
Length = 1020
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/68 (20%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +3
Query: 546 PRNYVA-WFGIATVYARQERWKASEVHIRRALSIHPLSGVLRCQLGLAQSALGKMERALS 722
P+++V +FG+ + + +K+S + L +HP + +G + G+ ++A+
Sbjct: 309 PQDFVLPFFGLGQIQLKFADYKSSLASFEKVLEVHPENCESLKAIGHIYAKSGENDKAIE 368
Query: 723 TLEKAVAL 746
T +K +
Sbjct: 369 TFKKVTRI 376
>07_01_0358 - 2631214-2632992
Length = 592
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 349 NPIAW-LVAGNCFSLHKERETALKFFRRAVQLNPDAAYAHALLGHEYA 489
N + W + G+C ++HK+ E + R V+L+P + + LL + YA
Sbjct: 388 NAVVWRTLLGSC-AMHKKLELGKVAWERLVELDPGHSGDYVLLSNLYA 434
>01_05_0709 + 24480660-24481796
Length = 378
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 116 FQELPPKQLASPWVQTMIARSHYELAQYEAAAKIFSEIRKQYPNRTEG-WKFTVPVYGI 289
++ + ++LA ++ R E + AA ++ +RK++P+R +G WK + GI
Sbjct: 294 YEAVKRRKLADLGTARVLVRGLKEAGKGRAARRVVIGLRKKFPDRFDGPWKDLEELAGI 352
>09_04_0327 +
16700235-16700312,16701756-16701978,16702488-16702730,
16702815-16702865,16702965-16703225,16703319-16703371,
16703446-16703815,16703906-16704750
Length = 707
Score = 27.9 bits (59), Expect = 9.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 260 WKFTVPVYGIFSVKHSY 310
W FT P+ G++S+ H Y
Sbjct: 234 WTFTTPIIGLYSIVHYY 250
>05_07_0255 + 28703799-28705703
Length = 634
Score = 27.9 bits (59), Expect = 9.1
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Frame = +1
Query: 250 Y*GMEIYSTCLWHLQREAQLSALAQELV---ELNRTNPIAWLVAGNCFSLHKERETALKF 420
Y E Y + L R +++ A+EL+ N + + W + E ET K
Sbjct: 466 YPAKEHYGCVVDLLGRAGRINE-AEELIGKIAANERDGVVWTSLLRACAARGEEETGKKA 524
Query: 421 FRRAVQLNPDAAYAHALLGHEYA 489
RA++ P A AH + + YA
Sbjct: 525 AERAMEAEPWGAGAHVAMANLYA 547
>03_02_0805 + 11382631-11384747,11385012-11385095,11385181-11385376
Length = 798
Score = 27.9 bits (59), Expect = 9.1
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = +1
Query: 226 NKKTVSKSY*-GMEIYSTCLWHLQREAQLSALAQELVELNRTNP--IAWLVAGNCFSLHK 396
N TV+ S G E YS C+ L + L A +L++ P + W +H+
Sbjct: 458 NSMTVNSSIRPGAEHYS-CMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHR 516
Query: 397 ERETALKFFRRAVQLNPDAAYAHALLGHEY 486
E A ++ ++L P A + LL H Y
Sbjct: 517 NAEIAEFAAKKLLELEPGNAGPYVLLSHIY 546
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,970,112
Number of Sequences: 37544
Number of extensions: 332462
Number of successful extensions: 823
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 823
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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