Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0784.Seq
         (522 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    25   0.36 
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              25   0.62 

>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 25.4 bits (53), Expect = 0.36
 Identities = 10/42 (23%), Positives = 26/42 (61%)
 Frame = -3

Query: 322 HILHLFVKGIEYF*QKYRFSSFHKQMLNTNLNNFILHT*CSH 197
           +++ L +K  ++    Y F+  + ++L  N+N+ I++T C++
Sbjct: 544 YMMALSMKLQKFINNDYNFNEVNFRILGANVNDLIMNTRCAN 585


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 24.6 bits (51), Expect = 0.62
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 318 FCICLSKGLNIFNRNIDFRP 259
           +C C+ K  NI ++N  F+P
Sbjct: 62  YCECILKNFNILDKNNVFKP 81


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,515
Number of Sequences: 438
Number of extensions: 3004
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)