Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0783.Seq
(674 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 33 0.050
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 31 0.15
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 28 1.1
SPAC6F12.05c |tnr3||thiamine diphosphokinase Tnr3 |Schizosacchar... 28 1.4
SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyce... 28 1.4
SPAC19E9.01c |nup40||nucleoporin Nup40|Schizosaccharomyces pombe... 27 3.3
SPAC20G8.10c ||SPAC3A12.01c|beclin family protein|Schizosaccharo... 27 3.3
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 27 3.3
SPAC631.02 |||bromodomain protein|Schizosaccharomyces pombe|chr ... 26 4.3
SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual 26 4.3
SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|... 25 7.6
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 25 7.6
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 25 7.6
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 32.7 bits (71), Expect = 0.050
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1
Query: 407 MTAPTCPMTALTALSRSAGVTSSASVSMGSLPFSTTSRSTT 285
+ +PT T +T+L R + + SAS S SL T S STT
Sbjct: 418 LASPTSSSTFVTSLLRRSSIDGSASSSSASLAVPTVSSSTT 458
Score = 26.6 bits (56), Expect = 3.3
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -1
Query: 380 ALTALSRSAGVTSSASVSMGSLPFSTTSRSTT*LMDISMDS 258
A ++ S SA TSSA S+ + P +++S + + SMDS
Sbjct: 341 ASSSSSASATATSSAESSIATSPITSSSNVVSSISTSSMDS 381
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 31.1 bits (67), Expect = 0.15
Identities = 24/65 (36%), Positives = 34/65 (52%)
Frame = -1
Query: 413 WSMTAPTCPMTALTALSRSAGVTSSASVSMGSLPFSTTSRSTT*LMDISMDSWWCASTRG 234
WS ++ P TA +A S ++ASVS GS ST+S +T D S S AS G
Sbjct: 956 WSSSSEVDPSTAASATGSSTSSIATASVS-GS---STSSVATASATDSSTSSIAAASVTG 1011
Query: 233 TLTNN 219
+ T++
Sbjct: 1012 SSTSS 1016
Score = 25.4 bits (53), Expect = 7.6
Identities = 18/78 (23%), Positives = 38/78 (48%)
Frame = -1
Query: 410 SMTAPTCPMTALTALSRSAGVTSSASVSMGSLPFSTTSRSTT*LMDISMDSWWCASTRGT 231
S + + +++ T+LS S VTSS + ++ S T+S + + SW ++
Sbjct: 877 SSSVVSSSLSSTTSLSTSIPVTSSVAPAVTSTGSETSSVVGSGTDSATSSSWTAETSSSA 936
Query: 230 LTNNARRIRFDISPVSRS 177
+T++ + ++P S S
Sbjct: 937 ITSS---VAASVTPTSSS 951
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -1
Query: 398 PTCPMTALTALSRSAGVTSSASVSMGSLPFSTTSRSTT 285
PT P T+ ++ S TS++S S P TTS S T
Sbjct: 193 PTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCT 230
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -1
Query: 398 PTCPMTALTALSRSAGVTSSASVSMGSLPFSTTSRSTT 285
PT P T+ ++ S TS++S S P TTS S T
Sbjct: 249 PTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCT 286
Score = 27.9 bits (59), Expect = 1.4
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -1
Query: 398 PTCPMTALTALSRSAGVTSSASVSMGSLPFSTTSRSTT 285
PT P T+ ++ S TS++S S P TTS S T
Sbjct: 136 PTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPTTSTSCT 173
>SPAC6F12.05c |tnr3||thiamine diphosphokinase Tnr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 27.9 bits (59), Expect = 1.4
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +2
Query: 65 VGKDSDDDDIEGVRQRREQLSELK--EAAYELLG-KAWPKDYETQEKY 199
VGK D E ++ E K +A ++L KAW +DY+T +K+
Sbjct: 306 VGKYERGDSFEDTSKKAETCVPAKPQKATHQLAPCKAWLRDYDTDQKF 353
>SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2100
Score = 27.9 bits (59), Expect = 1.4
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 226 VNVPRVLAHHQLSILMSINYVVERLVVLNGNEPMDTDADDVTPA 357
+NVP + S+ +I + + L LN NE + D++TPA
Sbjct: 854 LNVPNAEGEIEESVCDNILFAINNLSQLNFNEKLKDVKDNLTPA 897
>SPAC19E9.01c |nup40||nucleoporin Nup40|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 26.6 bits (56), Expect = 3.3
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +1
Query: 280 NYVVERLVVLNGNEPMDTDADDVTPADRDKAVSAVIGHVGAVIDHTL 420
N++ L EP+D + T +D +++ G + V+ HTL
Sbjct: 322 NWLFHYLFGFGSTEPIDEEEKSKTASDNTSLQTSLFGKIVQVVLHTL 368
>SPAC20G8.10c ||SPAC3A12.01c|beclin family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 464
Score = 26.6 bits (56), Expect = 3.3
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 483 TIKRSQKTRELNRLRKIYQNYSKNLSKDSSHEIRTNA 593
T + S+ R L +K+Y NY LS + HE T A
Sbjct: 151 TEEMSKTLRALKEEKKMYFNYDNFLSSQTVHEENTAA 187
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 26.6 bits (56), Expect = 3.3
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = -1
Query: 410 SMTAPTCPMTALTALSRSAGVTSSASVSMGSLPFSTTS--RSTT*LMDISMDSWWCASTR 237
S+ + P+T+ TAL+ S +TSS SV S P +++S S+T + S+ + T
Sbjct: 724 SVLNSSTPITSSTALNTSTPITSS-SVLNSSTPITSSSILNSSTPITSSSVLNSSTPITS 782
Query: 236 GTLTNNARRI 207
T+ N + I
Sbjct: 783 STVVNTSTPI 792
Score = 26.6 bits (56), Expect = 3.3
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -1
Query: 410 SMTAPTCPMTALTALSRSAGVTSSASVSMGSLPF--STTSRSTT*LMDISMDSWWCASTR 237
S+ + P+T+ TAL+ S +TSS SV S P ST ++T + S+ + T
Sbjct: 1288 SVLNSSTPITSSTALNTSTSITSS-SVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITS 1346
Query: 236 GTLTNNARRI 207
T+ N++ I
Sbjct: 1347 STVVNSSTPI 1356
Score = 26.6 bits (56), Expect = 3.3
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -1
Query: 389 PMTALTALSRSAGVTSSASVSMGSLPFSTTS 297
P+T+LTAL+ S +TSS SV S P ++++
Sbjct: 2567 PITSLTALNSSTPITSS-SVLNSSTPITSST 2596
Score = 26.2 bits (55), Expect = 4.3
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = -1
Query: 389 PMTALTALSRSAGVTSSASVSMGSLPFSTTS--RSTT*LMDISMDSWWCASTRGTLTNNA 216
P+T+ TAL+ S +TSS SV S P +++S S+T + ++ + T T+ N++
Sbjct: 443 PITSSTALNTSTPITSS-SVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSS 501
Query: 215 RRI 207
I
Sbjct: 502 TPI 504
Score = 26.2 bits (55), Expect = 4.3
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = -1
Query: 410 SMTAPTCPMTALTALSRSAGVTSSASVSMGSLPF--STTSRSTT*LMDISMDSWWCASTR 237
S+ + P+T+ TAL+ S +TSS SV S P ST ++T + S+ + T
Sbjct: 520 SVLNSSTPITSSTALNTSTSITSS-SVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITS 578
Query: 236 GTLTNNARRI 207
T+ N + I
Sbjct: 579 STVVNTSTPI 588
Score = 26.2 bits (55), Expect = 4.3
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = -1
Query: 410 SMTAPTCPMTALTALSRSAGVTSSASVSMGSLPF--STTSRSTT*LMDISMDSWWCASTR 237
S+ + P+T+ TAL+ S +TSS SV S P ST ++T + S+ + A T
Sbjct: 652 SVLNSSTPITSSTALNTSTPITSS-SVLNSSTPITSSTALNTSTPITSSSVLNSSTAITS 710
Query: 236 GTLTNNARRI 207
T N + I
Sbjct: 711 STALNTSTPI 720
Score = 26.2 bits (55), Expect = 4.3
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = -1
Query: 389 PMTALTALSRSAGVTSSASVSMGSLPF--STTSRSTT*LMDISMDSWWCASTRGTLTNNA 216
P+T+ TAL+ S +TSS SV S P ST S+T + S+ + T T+ N +
Sbjct: 1067 PITSSTALNTSTPITSS-SVLNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTS 1125
Query: 215 RRI 207
I
Sbjct: 1126 TPI 1128
Score = 26.2 bits (55), Expect = 4.3
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = -1
Query: 410 SMTAPTCPMTALTALSRSAGVTSSASVSMGSLPF--STTSRSTT*LMDISMDSWWCASTR 237
S+ + P+T+ TAL+ S +TSS SV S P ST S+T + ++ + T
Sbjct: 2152 SVLNSSTPITSSTALNTSTPITSS-SVLNSSTPITSSTVVNSSTPITSSTVVNTSTPITS 2210
Query: 236 GTLTNNARRI 207
T+ N + I
Sbjct: 2211 STVVNTSTPI 2220
Score = 26.2 bits (55), Expect = 4.3
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = -1
Query: 389 PMTALTALSRSAGVTSSASVSMGSLPF--STTSRSTT*LMDISMDSWWCASTRGTLTNNA 216
P+T+ TAL+ S +TSS SV S P ST ++T + S+ + T T+ N +
Sbjct: 2363 PITSSTALNTSTSITSS-SVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTS 2421
Query: 215 RRI 207
I
Sbjct: 2422 TSI 2424
Score = 26.2 bits (55), Expect = 4.3
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = -1
Query: 410 SMTAPTCPMTALTALSRSAGVTSSASVSMGSLPF--STTSRSTT*LMDISMDSWWCASTR 237
S+ + P+T+ TAL+ S +TSS SV S P ST ++T + S+ + T
Sbjct: 2632 SVLNSSTPITSSTALNTSTSITSS-SVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITS 2690
Query: 236 GTLTNNARRI 207
T+ N + I
Sbjct: 2691 STVVNTSTPI 2700
Score = 26.2 bits (55), Expect = 4.3
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = -1
Query: 410 SMTAPTCPMTALTALSRSAGVTSSASVSMGSLPF--STTSRSTT*LMDISMDSWWCASTR 237
S+ + P+T+ TAL+ S +TSS SV S P ST ++T + S+ + T
Sbjct: 2860 SVLNSSTPITSSTALNTSTSITSS-SVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITS 2918
Query: 236 GTLTNNARRI 207
T+ N + I
Sbjct: 2919 STVVNTSTPI 2928
Score = 26.2 bits (55), Expect = 4.3
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = -1
Query: 410 SMTAPTCPMTALTALSRSAGVTSSASVSMGSLPF--STTSRSTT*LMDISMDSWWCASTR 237
S+ + P+T+ TAL+ S +TSS SV S P ST ++T + S+ + T
Sbjct: 2956 SVLNSSTPITSSTALNTSTSITSS-SVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITS 3014
Query: 236 GTLTNNARRI 207
T+ N + I
Sbjct: 3015 STVVNTSTPI 3024
Score = 25.8 bits (54), Expect = 5.7
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -1
Query: 410 SMTAPTCPMTALTALSRSAGVTSSASVSMGSLPFSTTS 297
S+ + P+T+ TAL+ S +TSS SV S P +++S
Sbjct: 616 SVLNSSTPITSSTALNTSTPITSS-SVLNSSTPITSSS 652
Score = 25.8 bits (54), Expect = 5.7
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = -1
Query: 389 PMTALTALSRSAGVTSSASVSMGSLPFSTTS--RSTT*LMDISMDSWWCASTRGTLTNNA 216
P+T+ TAL+ S +TSS SV S P +++S ++T + S+ + A T T N +
Sbjct: 971 PITSSTALNTSTPITSS-SVLNSSTPITSSSVLNTSTPITSSSVLNSSTAITSSTALNTS 1029
Query: 215 RRI 207
I
Sbjct: 1030 TPI 1032
Score = 25.8 bits (54), Expect = 5.7
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = -1
Query: 410 SMTAPTCPMTALTALSRSAGVTSSASVSMGSLPFSTTSRSTT 285
S+ + P+T+ TAL+ S +TSS SV S P ++++ T
Sbjct: 1576 SVVNSSTPITSSTALNTSTPITSS-SVLNSSTPITSSTALNT 1616
Score = 25.8 bits (54), Expect = 5.7
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -1
Query: 410 SMTAPTCPMTALTALSRSAGVTSSASVSMGSLPFSTTS 297
S+ + P+T+ TAL+ S +TSS SV S P +++S
Sbjct: 1960 SVLNSSTPITSSTALNTSTPITSS-SVLNSSTPITSSS 1996
Score = 25.8 bits (54), Expect = 5.7
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = -1
Query: 410 SMTAPTCPMTALTALSRSAGVTSSASVSMGS-LPFSTTSRSTT*LMDISMDSWWCASTRG 234
S+ + P+T+ T ++ S +TSS V+ + + STT ++T + S+ + A T
Sbjct: 3268 SVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTTLNTSTPITSSSVLNSSTAITSS 3327
Query: 233 TLTNNARRI 207
T N + I
Sbjct: 3328 TALNTSTPI 3336
Score = 25.4 bits (53), Expect = 7.6
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = -1
Query: 410 SMTAPTCPMTALTALSRSAGVTSSASVSMGSLPFSTTSRSTT 285
S+ + P+T+ TAL+ S +TSS SV S P ++++ T
Sbjct: 1768 SVLNSSTPITSSTALNTSTPITSS-SVLNSSTPITSSTALNT 1808
Score = 25.4 bits (53), Expect = 7.6
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -1
Query: 389 PMTALTALSRSAGVTSSASVSMGSLPFSTTS 297
P+T+ TAL+ S +TSS SV S P +++S
Sbjct: 1907 PITSSTALNTSTPITSS-SVLNSSTPITSSS 1936
Score = 25.4 bits (53), Expect = 7.6
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -1
Query: 389 PMTALTALSRSAGVTSSASVSMGSLPFSTTS 297
P+T+ TAL+ S +TSS SV S P +++S
Sbjct: 2099 PITSSTALNTSTPITSS-SVLNSSTPITSSS 2128
Score = 25.4 bits (53), Expect = 7.6
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = -1
Query: 410 SMTAPTCPMTALTALSRSAGVTSSASVSMGSLPFSTTSRSTT 285
S+ + P+T+ TAL+ S +TSS SV S P ++++ T
Sbjct: 2836 SVLNSSTPITSSTALNTSTPITSS-SVLNSSTPITSSTALNT 2876
Score = 25.4 bits (53), Expect = 7.6
Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = -1
Query: 410 SMTAPTCPMTALTALSRSAGVTSSASV-SMGSLPFSTTSRSTT*LMDISMDSWWCASTRG 234
S+ + P+T+ TAL+ S +TSS+ + S ++ S+ S+T + S+ + A T
Sbjct: 3064 SVLNSSTPITSSTALNTSTPITSSSVLNSSTAITSSSIVNSSTPITSSSVLNSSTAITSS 3123
Query: 233 TLTNNARRI 207
++ N++ I
Sbjct: 3124 SILNSSTPI 3132
Score = 25.4 bits (53), Expect = 7.6
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = -1
Query: 410 SMTAPTCPMTALTALSRSAGVTSSASVSMGS-LPFSTTSRSTT*LMDISMDSWWCASTRG 234
S+ + P+T+ + L+ S +TSS V+ + + STT ++T + S+ + A T
Sbjct: 3124 SILNSSTPITSSSILNSSTPITSSTVVNSSTPITSSTTLNTSTPITSSSVLNSSTAITSS 3183
Query: 233 TLTNNARRI 207
++ N++ I
Sbjct: 3184 SIVNSSTPI 3192
Score = 25.0 bits (52), Expect = 10.0
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -1
Query: 389 PMTALTALSRSAGVTSSASVSMGSLPFSTTSRSTT 285
P+T+ TAL+ S +TSS SV S P ++++ T
Sbjct: 503 PITSSTALNTSTPITSS-SVLNSSTPITSSTALNT 536
Score = 25.0 bits (52), Expect = 10.0
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -1
Query: 389 PMTALTALSRSAGVTSSASVSMGSLPFSTTSRSTT 285
P+T+ TAL+ S +TSS SV S P ++++ T
Sbjct: 1751 PITSSTALNTSTPITSS-SVLNSSTPITSSTALNT 1784
Score = 25.0 bits (52), Expect = 10.0
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -1
Query: 389 PMTALTALSRSAGVTSSASVSMGSLPFSTTSRSTT 285
P+T+ TAL+ S +TSS SV S P ++++ T
Sbjct: 1847 PITSSTALNTSTPITSS-SVLNSSTPITSSTALNT 1880
Score = 25.0 bits (52), Expect = 10.0
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -1
Query: 389 PMTALTALSRSAGVTSSASVSMGSLPFSTTSRSTT 285
P+T+ TAL+ S +TSS SV S P ++++ T
Sbjct: 2039 PITSSTALNTSTPITSS-SVLNSSTPITSSTALNT 2072
Score = 25.0 bits (52), Expect = 10.0
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = -1
Query: 389 PMTALTALSRSAGVTSSASVSMGSLPF--STTSRSTT*LMDISMDSWWCASTRGTLTNNA 216
P+T+ TAL+ S +TSS SV S P ST ++T + S+ + T T+ N +
Sbjct: 2303 PITSSTALNTSTPITSS-SVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTS 2361
Query: 215 RRI 207
I
Sbjct: 2362 TPI 2364
Score = 25.0 bits (52), Expect = 10.0
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -1
Query: 389 PMTALTALSRSAGVTSSASVSMGSLPFSTTSRSTT 285
P+T+ TAL+ S +TSS SV S P ++++ T
Sbjct: 2615 PITSSTALNTSTPITSS-SVLNSSTPITSSTALNT 2648
Score = 25.0 bits (52), Expect = 10.0
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = -1
Query: 389 PMTALTALSRSAGVTSSASVSMGSLPF--STTSRSTT*LMDISMDSWWCASTRGTLTNNA 216
P+T+ TAL+ S +TSS SV S P ST ++T + S+ + T T+ N +
Sbjct: 2711 PITSSTALNTSTPITSS-SVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTS 2769
Query: 215 RRI 207
I
Sbjct: 2770 TPI 2772
Score = 25.0 bits (52), Expect = 10.0
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -1
Query: 389 PMTALTALSRSAGVTSSASVSMGSLPFSTTSRSTT 285
P+T+ TAL+ S +TSS SV S P ++++ T
Sbjct: 2939 PITSSTALNTSTPITSS-SVLNSSTPITSSTALNT 2972
Score = 25.0 bits (52), Expect = 10.0
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = -1
Query: 389 PMTALTALSRSAGVTSSASVSMGSLPF--STTSRSTT*LMDISMDSWWCASTRGTLTNNA 216
P+T+ TAL+ S +TSS SV S P ST S+T + + + T T+ N++
Sbjct: 3383 PITSSTALNTSTPITSS-SVLNSSTPITSSTVVNSSTPITSSTALNTSTPITSSTVVNSS 3441
Query: 215 RRI 207
I
Sbjct: 3442 TPI 3444
>SPAC631.02 |||bromodomain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 727
Score = 26.2 bits (55), Expect = 4.3
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 138 RRPTSCSARPGPRTTRHRRNIKTNSSSIVRQ 230
RRP S +A G TR + + +NSSS +R+
Sbjct: 348 RRPRSMTAPKGGARTRRQAAMYSNSSSGIRE 378
>SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 1279
Score = 26.2 bits (55), Expect = 4.3
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = -1
Query: 425 FVRVWSMTAPTCP--MTALTALSRSAGVTSSASVSMGSLPFSTTSRSTT 285
F + S T P+ P ++ + + + V S SVS +PFS +SR+++
Sbjct: 87 FPTLLSKTGPSKPRIVSWVRKTASNTSVAGSDSVSRDKIPFSASSRASS 135
>SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1184
Score = 25.4 bits (53), Expect = 7.6
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = +3
Query: 489 KRSQKTR--ELNRLRKIYQNYSKNLSKDSSH 575
K+ +K R E RL+K Y+K +S++S+H
Sbjct: 737 KKEEKARKAEEKRLQKERAKYAKQMSRESAH 767
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 25.4 bits (53), Expect = 7.6
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +3
Query: 462 NYGNTYQTIKRSQKTRELNRLRKIYQNYSKNLSKDSSHEIR 584
NY + + KR+ +R + RKI Q+++ + S S+ +R
Sbjct: 427 NYSDHHNNDKRAHVSRRHSTSRKIAQSHTGSSSTSSAANVR 467
>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 25.4 bits (53), Expect = 7.6
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = +3
Query: 3 ATGSVKSMRLLKLYSPRTNRRWVKIRTTTT*RA*GSDANSCLSSKRRPTSC--SARPGPR 176
++ S S L S T+ +TT+ + S ++S SSK +S S+R R
Sbjct: 116 SSSSSSSSSSSSLVSSTTSSSSSATPSTTSSSSSSSSSSSSSSSKSSSSSSKSSSRSSSR 175
Query: 177 TTRHRRNIKTNSS 215
TT HR +SS
Sbjct: 176 TTSHRTTSHKSSS 188
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,151,619
Number of Sequences: 5004
Number of extensions: 37457
Number of successful extensions: 350
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 330
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 309878492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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