Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0782.Seq
         (790 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    25   0.91 
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   2.8  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   3.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.9  

>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = -3

Query: 428 VFPYVDFLLLTMLFVLSSSIVFLFHW*YLHVYIHI---LFLFR 309
           +F  +DF L   + V + +I   F W ++ V+I +    F+FR
Sbjct: 77  IFTVIDFSLCKAILVHAITIRSTFSWTFIDVFIMLTSTAFVFR 119


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -2

Query: 195 SSHLLYREIIDKYPHDKYLLKI 130
           +S L  +E ++  P DKY+++I
Sbjct: 424 TSTLTQKEYLENLPSDKYIIQI 445


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +3

Query: 681 GPEDYTAYAFLPHMLFLMLISTKSHKRVKKIYVR 782
           G  ++ A  F+P  +   L   K  K   K+YVR
Sbjct: 322 GQLEFRALLFVPRRVPFDLFENKKRKNNIKLYVR 355


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -2

Query: 417 C*FFTFNNVICFVLINRFFVSLVIFTCLYSHF 322
           C   TFN  + F+L + +F   ++F C +  F
Sbjct: 61  CVSITFNVHLLFLLCSGYFTVHLLFYCPFIIF 92


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,992
Number of Sequences: 336
Number of extensions: 4503
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)