Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0782.Seq
(790 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0867 + 25534760-25539620,25540662-25540857,25540957-255411... 92 5e-19
06_03_1121 + 27767707-27768065,27768612-27769034,27770013-277701... 38 0.012
01_01_0650 - 4948852-4950012 34 0.11
03_05_0799 + 27809301-27811550 34 0.15
04_03_1028 - 21827961-21827972,21828018-21828112,21828286-218283... 33 0.20
08_01_0244 + 2016548-2017101,2017392-2019681,2019785-2019817 33 0.26
04_04_1500 + 34010819-34011016,34013267-34013308,34014195-340142... 33 0.26
07_01_1143 - 10711023-10711884,10713603-10713826,10714253-107145... 32 0.60
06_01_0493 - 3536207-3537056,3537603-3537826,3538234-3538503,353... 32 0.60
05_02_0028 - 5764980-5766374 32 0.60
02_01_0703 + 5251901-5251950,5252783-5253554 32 0.60
09_03_0048 + 11880848-11880952,11881030-11881312,11882667-118827... 31 0.79
06_03_0766 - 24425486-24426245,24430766-24430855,24430951-244310... 31 1.4
06_03_0253 + 18753901-18754278,18754873-18754968,18755167-187553... 31 1.4
06_03_0246 + 18672704-18673111,18674069-18674164,18674362-186745... 31 1.4
06_02_0136 + 12195422-12195435,12196047-12196122,12196896-121977... 31 1.4
04_04_0348 + 24568834-24568904,24569019-24569148,24569310-245694... 31 1.4
06_03_1309 + 29223197-29223240,29223358-29223592,29223695-292237... 30 1.8
05_01_0524 - 4522488-4523762,4524534-4524644,4524794-4524889 30 1.8
01_06_1254 + 35761046-35761162,35761332-35761416,35761877-357620... 30 2.4
01_05_0707 - 24468329-24468448,24468794-24468940,24469050-244691... 30 2.4
07_03_1050 - 23570785-23570824,23570938-23571004,23571114-235711... 29 4.2
03_06_0523 + 34499533-34499705,34499808-34499917,34500037-345002... 29 4.2
01_05_0420 + 21969797-21970939,21971307-21971369,21971488-219716... 29 4.2
07_01_0281 - 2067696-2068862 29 5.6
07_01_0056 + 428297-428332,428574-430127,430209-430274 29 5.6
01_06_1805 - 39999987-40000169,40000648-40000974,40001724-400020... 28 7.4
12_02_0803 + 23318429-23318552,23318688-23319877,23320724-233215... 28 9.7
09_02_0357 + 7788946-7789326,7789620-7789997 28 9.7
04_04_0040 + 22322839-22324173 28 9.7
01_06_1814 + 40061080-40061395,40062243-40062641,40062758-40062864 28 9.7
01_01_1089 - 8560008-8560220,8560456-8560977,8561095-8561283,856... 28 9.7
>06_03_0867 + 25534760-25539620,25540662-25540857,25540957-25541104,
25541673-25541751,25542151-25542238,25542330-25542600,
25542676-25542718,25542801-25542904,25543374-25543790
Length = 2068
Score = 91.9 bits (218), Expect = 5e-19
Identities = 35/81 (43%), Positives = 53/81 (65%)
Frame = +3
Query: 9 SKLRKNNIPCPLFKKFGKCIRQIKGNCKFLHDKKHVAICRKFLKGICHEDTCLLSHDITS 188
S+L K C F +FG+C ++ +G C ++HD+ V IC KFLKG+C +C L+H +
Sbjct: 1826 SRLAKKQQYCQFFTRFGEC-KKPRGKCPYIHDRAKVTICTKFLKGLCSNTSCKLTHKVLP 1884
Query: 189 EKMPTCYFYLKGMCTKENCPY 251
E+MP C ++L+G+CT CPY
Sbjct: 1885 ERMPDCSYFLRGLCTNIACPY 1905
Score = 41.9 bits (94), Expect = 6e-04
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 254 NVKLNKNSKLCSDFLKGYCERGTKCEYRH 340
+VK+N N+ +C DFLKGYC G +C +H
Sbjct: 1907 HVKVNLNAPVCEDFLKGYCAYGDECHKKH 1935
>06_03_1121 +
27767707-27768065,27768612-27769034,27770013-27770175,
27770271-27770381,27770895-27770963,27771117-27771203,
27771967-27772752
Length = 665
Score = 37.5 bits (83), Expect = 0.012
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +3
Query: 120 ICRKFLKGICHE-DTCLLSHDITSEKMPTCYFYLK-GMCTKENCPY 251
+CR +L+G+C + + C H +MP C F+ G C + +C Y
Sbjct: 63 VCRHWLRGLCMKGEACGFLHQFDKARMPVCRFFRDFGECREPDCAY 108
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +2
Query: 278 KLCSDFLKGYCERGTKCEYRHVNITN---ETKKRLMRTKQITLLKVKNQHTEKPNKNESV 448
K C+ + G+C G C Y+HV + ++ L + QI NQH N N+
Sbjct: 116 KECNMYKMGFCPNGPNCRYKHVKLPGPPPPVEEVLQKILQIRSFNKFNQHRHN-NYNQQG 174
Query: 449 EESQN 463
E Q+
Sbjct: 175 ERPQH 179
>01_01_0650 - 4948852-4950012
Length = 386
Score = 34.3 bits (75), Expect = 0.11
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 260 KLNKNSKLCSDFLKGYCERGTKCEYRH 340
K + + C DF KG C+RG CEY H
Sbjct: 114 KYHYSGTACPDFRKGGCKRGDACEYAH 140
>03_05_0799 + 27809301-27811550
Length = 749
Score = 33.9 bits (74), Expect = 0.15
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +2
Query: 284 CSDFLKGYCERGTKCEYRH 340
C DF KG C RG CEY H
Sbjct: 312 CPDFRKGVCRRGDMCEYAH 330
>04_03_1028 -
21827961-21827972,21828018-21828112,21828286-21828361,
21828921-21829037,21829532-21829621,21830011-21830056,
21831407-21831502,21831599-21832008
Length = 313
Score = 33.5 bits (73), Expect = 0.20
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +3
Query: 57 GKCIRQIKGNCKFLHD---KKHVAICRKFLKGICHEDTCLLSHDITSEKMP 200
G+C R C+FLH + +C+ FL+G C +C SH + + MP
Sbjct: 192 GRCSRSAN-ECRFLHHSPLEDCAIVCQDFLRGRCDRKSCRYSH-VMAHPMP 240
Score = 32.7 bits (71), Expect = 0.34
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +3
Query: 96 LHDKKHVAICRKFLKGICHEDT--C-LLSHDITSEKMPTCYFYLKGMCTKENCPY 251
+ D K +CR F +G C C L H + C +L+G C +++C Y
Sbjct: 177 VEDPKVKMVCRDFTRGRCSRSANECRFLHHSPLEDCAIVCQDFLRGRCDRKSCRY 231
Score = 29.9 bits (64), Expect = 2.4
Identities = 10/27 (37%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +3
Query: 114 VAICRKFLKGICHEDTCLLSH-DITSE 191
V +CR +LK +C+ ++C +H D+ +E
Sbjct: 284 VEVCRDYLKNMCNRESCRFAHPDLNNE 310
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 281 LCSDFLKGYCERGTKCEYRHV 343
+C DFL+G C+R C Y HV
Sbjct: 215 VCQDFLRGRCDR-KSCRYSHV 234
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 266 NKNSKLCSDFLKGYCERGTKCEYRHVNITNE 358
N ++C D+LK C R C + H ++ NE
Sbjct: 281 NYGVEVCRDYLKNMCNR-ESCRFAHPDLNNE 310
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Frame = +2
Query: 257 VKLNKNSKL--CSDFLKGYCERGTKCEYRH 340
V ++++SK+ C+D L+ C RG C Y H
Sbjct: 133 VAVDRDSKVTACADSLRNNCFRGRTCRYYH 162
>08_01_0244 + 2016548-2017101,2017392-2019681,2019785-2019817
Length = 958
Score = 33.1 bits (72), Expect = 0.26
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 284 CSDFLKGYCERGTKCEYRHVNIT 352
C DF+KG C RG C Y H + T
Sbjct: 320 CHDFVKGRCSRGANCRYVHDDST 342
Score = 29.5 bits (63), Expect = 3.2
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 284 CSDFLKGYCERGTKCEYRH 340
C DF+ G C RG+ C + H
Sbjct: 235 CRDFVAGRCRRGSNCRFPH 253
>04_04_1500 +
34010819-34011016,34013267-34013308,34014195-34014204,
34014526-34014586,34014621-34014678,34015266-34015412,
34015643-34016205,34018942-34019728
Length = 621
Score = 33.1 bits (72), Expect = 0.26
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 266 NKNSKLCSDFLKGYCERGTKCEYRHVNITNETKK 367
N +KLC +F+KG C G +C + H NE +K
Sbjct: 587 NYKTKLCENFVKGTCTFGDRCHFAHGE--NEQRK 618
>07_01_1143 -
10711023-10711884,10713603-10713826,10714253-10714522,
10715071-10715175
Length = 486
Score = 31.9 bits (69), Expect = 0.60
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 281 LCSDFLKGYCERGTKCEYRH 340
+CS +++G C RG +C YRH
Sbjct: 162 VCSFYVRGECTRGAECPYRH 181
>06_01_0493 -
3536207-3537056,3537603-3537826,3538234-3538503,
3539042-3539146
Length = 482
Score = 31.9 bits (69), Expect = 0.60
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 281 LCSDFLKGYCERGTKCEYRH 340
+CS +++G C RG +C YRH
Sbjct: 162 VCSFYVRGECTRGAECPYRH 181
>05_02_0028 - 5764980-5766374
Length = 464
Score = 31.9 bits (69), Expect = 0.60
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 284 CSDFLKGYCERGTKCEYRH 340
C DF KG C+RG CE+ H
Sbjct: 185 CPDFRKGGCKRGDACEFAH 203
>02_01_0703 + 5251901-5251950,5252783-5253554
Length = 273
Score = 31.9 bits (69), Expect = 0.60
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 266 NKNSKLCSDFLKGYCERGTKCEYRHVNITNETKK 367
N +KLC +F KG C G +C + H NE +K
Sbjct: 238 NFKTKLCENFTKGSCTFGDRCHFAHGE--NELRK 269
>09_03_0048 +
11880848-11880952,11881030-11881312,11882667-11882770,
11883998-11884416,11884698-11884998,11885136-11885232,
11885719-11885864,11885975-11886103
Length = 527
Score = 31.5 bits (68), Expect = 0.79
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +2
Query: 272 NSKLCSDFL-KGYCERGTKCEYRH 340
N +C DFL KG CE+G +C + H
Sbjct: 266 NRNVCFDFLNKGKCEKGPECRFAH 289
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +2
Query: 275 SKLCSDFLK-GYCERGTKCEYRH 340
++LC F G C RG+KC YRH
Sbjct: 235 NRLCFKFTSSGSCPRGSKCNYRH 257
>06_03_0766 -
24425486-24426245,24430766-24430855,24430951-24431070,
24431568-24431746,24432046-24432231,24432454-24432547,
24432679-24432743,24433652-24433987
Length = 609
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 266 NKNSKLCSDFLKGYCERGTKCEYRH 340
N +KLC +F KG C G +C + H
Sbjct: 573 NFKTKLCENFNKGSCTFGDRCHFAH 597
>06_03_0253 +
18753901-18754278,18754873-18754968,18755167-18755376,
18756028-18756093,18756379-18756576,18756616-18756810,
18756968-18757014,18757147-18757234,18757331-18757681,
18758593-18759123
Length = 719
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +2
Query: 239 KLSLFNVKLNKNSKLCSDFL-KGYCERGTKCEYRHVNITNETKK 367
KL++ + L + LCS ++ +G C+ GT C++ H + ++ +K
Sbjct: 148 KLNVLGLPLRPGTGLCSYYMNRGICKFGTNCKFDHPDPGSDHEK 191
>06_03_0246 +
18672704-18673111,18674069-18674164,18674362-18674571,
18675780-18675851,18675898-18675945
Length = 277
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 239 KLSLFNVKLNKNSKLCSDFL-KGYCERGTKCEYRHVN 346
KL+ + L + LCS ++ +G C+ G+ C++ H N
Sbjct: 158 KLNFLGLPLRPGTGLCSYYMNRGICKFGSNCKFHHPN 194
>06_02_0136 +
12195422-12195435,12196047-12196122,12196896-12197707,
12197941-12198010,12199469-12199557,12199633-12199666
Length = 364
Score = 30.7 bits (66), Expect = 1.4
Identities = 9/36 (25%), Positives = 22/36 (61%)
Frame = +2
Query: 245 SLFNVKLNKNSKLCSDFLKGYCERGTKCEYRHVNIT 352
+ ++ + + ++C+ + KG C G++C Y HV ++
Sbjct: 19 AFLHILVLRTLQVCTFYQKGSCSYGSRCRYDHVKVS 54
>04_04_0348 +
24568834-24568904,24569019-24569148,24569310-24569459,
24569546-24569650,24569808-24570029,24570162-24570274,
24570371-24570470,24571125-24571325,24571401-24571549,
24571624-24571765,24571851-24571991,24572098-24572286,
24572622-24572835,24573198-24573291,24573671-24573905,
24574242-24574433,24574919-24575017,24575443-24575532,
24575709-24575912,24575994-24576269,24576974-24577096,
24577453-24577608,24577686-24577802,24577878-24577957,
24578173-24578377,24578485-24578687,24578882-24578933
Length = 1350
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -3
Query: 569 RFPSLHRIGFITPQSALVSSSLV*CPDSICNPYFFHFD 456
R PSLHR+ ++ ++ ++ + +S+CNPY FD
Sbjct: 448 RQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFD 485
>06_03_1309 +
29223197-29223240,29223358-29223592,29223695-29223783,
29223870-29223968,29224065-29224158,29224297-29224514,
29224861-29224967,29225298-29225472,29225596-29225743,
29226548-29226596,29228016-29228162,29229990-29229996,
29230417-29230482,29230773-29231991,29232073-29233149,
29233226-29233355,29233519-29233617,29233817-29233878,
29234429-29234533
Length = 1389
Score = 30.3 bits (65), Expect = 1.8
Identities = 8/28 (28%), Positives = 18/28 (64%)
Frame = +2
Query: 263 LNKNSKLCSDFLKGYCERGTKCEYRHVN 346
+++ ++C +F +G C+ G +C Y H +
Sbjct: 1 MSRRQEICRNFQRGSCKYGAQCRYLHAS 28
>05_01_0524 - 4522488-4523762,4524534-4524644,4524794-4524889
Length = 493
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/18 (61%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = +3
Query: 204 CYFYLKGMCTK-ENCPYL 254
CYFY C+K +NCPYL
Sbjct: 97 CYFYYNSHCSKGDNCPYL 114
>01_06_1254 +
35761046-35761162,35761332-35761416,35761877-35762017,
35762118-35762206,35762519-35762701,35763509-35763697,
35763808-35763938,35764023-35764125,35765123-35765308
Length = 407
Score = 29.9 bits (64), Expect = 2.4
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Frame = +2
Query: 257 VKLNKNSKLCSDFLKGYCERGTKCEYRH-VNITNETKKRLMRT--KQITLLKVKNQHT-E 424
V ++ S +C F G C++G KC++ H +N+ + +K + T + ++ +Q T E
Sbjct: 67 VGVDPKSIVCEFFKVGQCQKGFKCKFSHDLNVQRKGEKIDIYTDKRDAETMEDWDQETLE 126
Query: 425 KPNKNESVEESQNE 466
K ++ E QN+
Sbjct: 127 KVVASKGAEYQQNK 140
>01_05_0707 -
24468329-24468448,24468794-24468940,24469050-24469103,
24469185-24469300,24470537-24470583,24470686-24470723,
24471050-24471268,24471504-24471602,24471675-24471728,
24472907-24473148,24474258-24474447
Length = 441
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +3
Query: 3 ESSKLRKNNIPCPLFKKFGKCIRQIKGNCKFLHDKKHV 116
ES ++ CP F K GKC + CKF H K+ V
Sbjct: 150 ESYPEQEGEPDCPFFMKTGKC--KFGSKCKFNHPKEKV 185
>07_03_1050 -
23570785-23570824,23570938-23571004,23571114-23571196,
23572028-23572201,23572268-23572471,23572570-23573300
Length = 432
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/27 (37%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +2
Query: 272 NSKLCS-DFLKGYCERGTKCEYRHVNI 349
+SK C F +GYC++G C++ H ++
Sbjct: 134 SSKPCHFHFFRGYCKKGVNCQFFHGSV 160
>03_06_0523 +
34499533-34499705,34499808-34499917,34500037-34500224,
34500984-34501451
Length = 312
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 281 LCSDFLKGYCERGTKCEYRH 340
+C F KG C RG C Y H
Sbjct: 135 VCYAFQKGECNRGASCRYSH 154
>01_05_0420 +
21969797-21970939,21971307-21971369,21971488-21971616,
21972241-21972291,21972669-21972809,21972922-21973122,
21973201-21973419,21973582-21973700,21973772-21973862,
21975864-21975965,21976291-21976315,21976522-21976592
Length = 784
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 236 RKLSLFNVKLNKNSKLCSDFLKGYCERGTKCEYRHVNITNETKKR 370
++L L V K K+C +L G C++G C++ H + T TK +
Sbjct: 419 KRLKLQPVIKPKVVKVCHFYLHGKCQQGNLCKFSH-DTTPLTKSK 462
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +2
Query: 284 CSDFLK-GYCERGTKCEYRHVNITNE 358
C +F++ G C RG KC++ HV T E
Sbjct: 489 CHNFMENGMCIRGDKCKFSHVIPTAE 514
>07_01_0281 - 2067696-2068862
Length = 388
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 281 LCSDFLKGYCERGTKCEYRH 340
LCS + KG C G C Y H
Sbjct: 326 LCSKWRKGRCHNGAACRYSH 345
>07_01_0056 + 428297-428332,428574-430127,430209-430274
Length = 551
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/77 (23%), Positives = 37/77 (48%)
Frame = +2
Query: 275 SKLCSDFLKGYCERGTKCEYRHVNITNETKKRLMRTKQITLLKVKNQHTEKPNKNESVEE 454
+K+ D+ G+ R + V I + +K + T + + +++ + + KNESVE+
Sbjct: 174 NKIVQDYDNGHAHRAENV--KSVEIADRDEKAMADTSKGSSIEISHSIIDH-EKNESVEK 230
Query: 455 SQNERNMDCRYYRDIKP 505
++ D +DI P
Sbjct: 231 MESAPTKDADETQDILP 247
>01_06_1805 -
39999987-40000169,40000648-40000974,40001724-40002017,
40002112-40002231,40002714-40002776,40003150-40003310,
40003864-40004035
Length = 439
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 239 KLSLFNVKLNKNSKLCSDFLK-GYCERGTKCEYRHVNITN 355
+L+ L + K C+ +LK G C+ G C++ H + N
Sbjct: 162 QLNTLGYPLRPSEKECAYYLKTGQCKYGNTCKFHHPELFN 201
>12_02_0803 +
23318429-23318552,23318688-23319877,23320724-23321528,
23321938-23322417,23322535-23322815,23323207-23323302,
23323423-23323548,23324100-23325890
Length = 1630
Score = 27.9 bits (59), Expect = 9.7
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 198 PTCYFYLKGMCTKENCPY 251
P C F L+G C E CP+
Sbjct: 827 PFCMFELRGKCNDEECPW 844
>09_02_0357 + 7788946-7789326,7789620-7789997
Length = 252
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +2
Query: 266 NKNSKLCSDFLKGYCERGTKCEYRH 340
N S LC + +G C G C Y H
Sbjct: 35 NHKSVLCMKWREGRCHNGVACRYAH 59
>04_04_0040 + 22322839-22324173
Length = 444
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 272 NSKLCSDFLKGYCERGTKCEYRHVNITNETKKRLMRTKQITLLKVK 409
+S CSD C +KC Y + + + + ++ T+ TL K K
Sbjct: 151 SSASCSDLPTSKCTSASKCGYTYTYGDSSSTQGVLATETFTLAKSK 196
>01_06_1814 + 40061080-40061395,40062243-40062641,40062758-40062864
Length = 273
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +3
Query: 105 KKHVAICRKFLKGICHEDTCLLSHDITSEKMPTCYFYLKGMCTKENCP 248
K+ + F +C + L+ D T+E P F L CT E CP
Sbjct: 130 KRKFGLVSDFTTEVCPKRKFGLASDCTTEVCPKRKFGLVSDCTTEVCP 177
>01_01_1089 - 8560008-8560220,8560456-8560977,8561095-8561283,
8561377-8561642,8561967-8562111,8562411-8562530,
8562611-8562930,8564161-8564341,8564434-8564580,
8565186-8565497,8566303-8566450,8566592-8566765,
8567385-8567446,8567499-8567571,8567628-8567683,
8568370-8568645,8569541-8569588,8569870-8569991,
8570258-8570413,8571037-8571079,8572624-8572701,
8572972-8573070,8573168-8573209,8573302-8573304
Length = 1264
Score = 27.9 bits (59), Expect = 9.7
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 275 SKLCSDFLKGYCERGTKCEYRH 340
+++C FL G C RG C + H
Sbjct: 983 NEMCVFFLNGSCNRGDTCHFSH 1004
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,278,691
Number of Sequences: 37544
Number of extensions: 377384
Number of successful extensions: 1004
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1001
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -