Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0782.Seq
(790 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U67957-1|AAB07587.2| 324|Caenorhabditis elegans Hypothetical pr... 42 7e-04
Z79695-4|CAB01969.3| 374|Caenorhabditis elegans Hypothetical pr... 39 0.004
AC024826-3|AAP13746.1| 343|Caenorhabditis elegans Hypothetical ... 38 0.006
AC024826-2|AAF60798.1| 413|Caenorhabditis elegans Hypothetical ... 38 0.006
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 36 0.044
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical... 33 0.18
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 33 0.31
U41109-13|AAB37036.1| 264|Caenorhabditis elegans Posterior segr... 31 0.94
AB006208-1|BAA33854.1| 264|Caenorhabditis elegans cytoplasmic z... 31 0.94
Z82261-4|CAB05147.1| 203|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z74476-2|CAA98962.1| 200|Caenorhabditis elegans Hypothetical pr... 31 1.2
AF045646-5|AAK29828.1| 225|Caenorhabditis elegans Hypothetical ... 30 1.6
Z82267-5|CAB05193.1| 203|Caenorhabditis elegans Hypothetical pr... 29 2.9
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 29 2.9
AL110495-2|CAB60410.1| 203|Caenorhabditis elegans Hypothetical ... 29 2.9
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z77661-1|CAB01186.1| 341|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF016418-9|AAK18904.1| 186|Caenorhabditis elegans Hypothetical ... 29 3.8
Z81105-5|CAB03218.2| 331|Caenorhabditis elegans Hypothetical pr... 29 5.0
U29157-1|AAA68423.4| 675|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z82267-3|CAB05191.1| 186|Caenorhabditis elegans Hypothetical pr... 28 6.6
U40797-8|AAL08029.1| 332|Caenorhabditis elegans Serpentine rece... 28 6.6
AL032655-2|CAB60457.1| 561|Caenorhabditis elegans Hypothetical ... 28 6.6
AF000265-7|AAB52941.1| 893|Caenorhabditis elegans Hypothetical ... 28 6.6
Z81142-8|CAO82053.1| 370|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z68119-3|CAA92194.1| 131|Caenorhabditis elegans Hypothetical pr... 28 8.8
U46674-4|AAA85756.1| 574|Caenorhabditis elegans Hypothetical pr... 28 8.8
AL117204-11|CAB55126.1| 201|Caenorhabditis elegans Hypothetical... 28 8.8
AL117204-8|CAB55123.1| 205|Caenorhabditis elegans Hypothetical ... 28 8.8
AL032654-10|CAB63391.1| 819|Caenorhabditis elegans Hypothetical... 28 8.8
>Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical
protein F11A10.8 protein.
Length = 302
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +3
Query: 87 CKFLH-DKKHVAICRKFLKGICHE-DTCLLSHDITSEKMPTCYFYLK-GMCTKENCPY 251
C H D + +C+ +L+G+C + D C H+ KMP C+F+ K C+ CP+
Sbjct: 69 CPLRHIDGEKAVVCKHWLRGLCKKGDQCEFLHEYDLTKMPECFFFSKYSACSNRECPF 126
Score = 35.5 bits (78), Expect = 0.044
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 102 DKKHVAICRKFLKGIC-HEDTCLLSHDITSEKMPTCYFYLKGMCTK-ENCPYL 254
D+ A+CRK +C TC L H I EK C +L+G+C K + C +L
Sbjct: 48 DRSGKAVCRKNKLKMCPFGPTCPLRH-IDGEKAVVCKHWLRGLCKKGDQCEFL 99
Score = 29.1 bits (62), Expect = 3.8
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +2
Query: 281 LCSDFLKGYCERGTKCEYRH 340
+C +L+G C++G +CE+ H
Sbjct: 81 VCKHWLRGLCKKGDQCEFLH 100
Score = 29.1 bits (62), Expect = 3.8
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = +2
Query: 266 NKNSKLCSDFLKGYCERGTKCEYRH 340
++ +C ++L G+C +G C+Y H
Sbjct: 156 HRRRAVCPNYLAGFCLQGPDCQYAH 180
>U67957-1|AAB07587.2| 324|Caenorhabditis elegans Hypothetical
protein K02H8.1 protein.
Length = 324
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 9/56 (16%)
Frame = +3
Query: 114 VAICRKFLKGIC--HEDTCLLSH-----DITSEKMPTCYFYLKGMCTKEN--CPYL 254
V +CR+FL+G C + C +H D+ ++ CY +KG CT+EN C YL
Sbjct: 41 VEVCREFLRGQCARSDQECKFAHPPPNVDVQQGRVTACYDSIKGRCTRENPKCKYL 96
>Z79695-4|CAB01969.3| 374|Caenorhabditis elegans Hypothetical
protein F27D4.4a protein.
Length = 374
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/90 (24%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Frame = +2
Query: 263 LNKNSKLCSDFLKGYCERGTKCEYRH-VNITNETKKRLM--RTKQITLLKVKNQHTEKPN 433
++ S LC F +G C +G KC++ H + + +T K+ + ++++ + N++ +
Sbjct: 89 VDPKSLLCVFFKQGLCGKGAKCKFSHDLAVAQKTAKKNLYADSREVEKDEETNENWDSDK 148
Query: 434 KNESV-EESQNERNMD--CRYYRDIKPNSK 514
NE V ++++N+ +D C+Y+ + N+K
Sbjct: 149 LNEVVNKKNKNKHMIDIVCKYFLEAVENNK 178
>AC024826-3|AAP13746.1| 343|Caenorhabditis elegans Hypothetical
protein Y55F3AM.6b protein.
Length = 343
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 108 KHVAICRKFLKGICHE-DTCLLSHDITSEKMPTCYFYLKGMCT 233
+H CR F G C + +TC +HD+ + C+F L G C+
Sbjct: 3 RHETDCRYFANGYCSKGNTCTFTHDVATRNENICHFNLVGKCS 45
>AC024826-2|AAF60798.1| 413|Caenorhabditis elegans Hypothetical
protein Y55F3AM.6a protein.
Length = 413
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 108 KHVAICRKFLKGICHE-DTCLLSHDITSEKMPTCYFYLKGMCT 233
+H CR F G C + +TC +HD+ + C+F L G C+
Sbjct: 3 RHETDCRYFANGYCSKGNTCTFTHDVATRNENICHFNLVGKCS 45
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 35.5 bits (78), Expect = 0.044
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 281 LCSDFLKGYCERGTKCEYRHVNITN 355
+CS F+KG C+RG +C YRH T+
Sbjct: 167 ICSFFVKGECKRGEECPYRHEKPTD 191
>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
protein Y26D4A.9 protein.
Length = 1435
Score = 33.5 bits (73), Expect = 0.18
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +2
Query: 338 HVNITNETKKRLMRTKQITLLK-VKNQHTEKPNKNESVEESQNERNMDCRYYRDIKPNSK 514
H+ K ++ +++T LK + H EK +NE +E+ ER D R + PN K
Sbjct: 9 HILKVTSYKLSEIKQRRVTELKEILRVHYEKEKENEKIEKENKERERDNFQLRKLFPNDK 68
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 32.7 bits (71), Expect = 0.31
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 281 LCSDFLKGYCERGTKCEYRH 340
+C DFLK C RG++C++ H
Sbjct: 58 VCRDFLKNICNRGSRCKFYH 77
Score = 32.3 bits (70), Expect = 0.41
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +2
Query: 281 LCSDFLKGYCERGT-KCEYRHVNITNETKKR 370
+C +F G C RG +C Y HVN+ E +R
Sbjct: 146 ICKEFQTGRCARGVNRCRYWHVNVDLERDRR 176
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 6/51 (11%)
Frame = +3
Query: 120 ICRKFLKGICHEDT-CLLSH-----DITSEKMPTCYFYLKGMCTKENCPYL 254
+CR FLK IC+ + C H I+ C Y C ++NC ++
Sbjct: 58 VCRDFLKNICNRGSRCKFYHPSEAPPISDHDYNFCIDYQNRGCQRDNCRFV 108
>U41109-13|AAB37036.1| 264|Caenorhabditis elegans Posterior
segregation protein 1 protein.
Length = 264
Score = 31.1 bits (67), Expect = 0.94
Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Frame = +2
Query: 281 LCSDF-LKGYCERGTKCEYRHVNITNETKKRLMRTKQITLLKVKNQHTEKPNKNESVEES 457
LC F + G C+ GT+C++ H + K T K ++ N + V +
Sbjct: 146 LCDKFSMTGNCKYGTRCQFIHKIVDGNAAKLASGAHANTSSKSPARNAAAHNHSLFVPQG 205
Query: 458 QNERNMDCRYYRDIKPNSKIPKQIVA**NRFDVS 559
+R+MD I+ + + + A R DVS
Sbjct: 206 STDRSMDLNQSLPIRQSDLV--RAFARATRLDVS 237
>AB006208-1|BAA33854.1| 264|Caenorhabditis elegans cytoplasmic
zinc-finger protein protein.
Length = 264
Score = 31.1 bits (67), Expect = 0.94
Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Frame = +2
Query: 281 LCSDF-LKGYCERGTKCEYRHVNITNETKKRLMRTKQITLLKVKNQHTEKPNKNESVEES 457
LC F + G C+ GT+C++ H + K T K ++ N + V +
Sbjct: 146 LCDKFSMTGNCKYGTRCQFIHKIVDGNAAKLASGAHANTSSKSPARNAAAHNHSLFVPQG 205
Query: 458 QNERNMDCRYYRDIKPNSKIPKQIVA**NRFDVS 559
+R+MD I+ + + + A R DVS
Sbjct: 206 STDRSMDLNQSLPIRQSDLV--RAFARATRLDVS 237
>Z82261-4|CAB05147.1| 203|Caenorhabditis elegans Hypothetical
protein C35D6.4 protein.
Length = 203
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/45 (26%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +2
Query: 266 NKNSKLCSDF-LKGYCERGTKCEYRHVNITNETKKRLMRTKQITL 397
N + LC++F G+C+ G +C++ H ++ + + + T+ IT+
Sbjct: 129 NYKTVLCNNFSTTGHCKYGIRCQFIHRSMDSTSSNQSNETENITI 173
>Z74476-2|CAA98962.1| 200|Caenorhabditis elegans Hypothetical
protein W05B10.2 protein.
Length = 200
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +2
Query: 260 KLNKNSKL-CSDFLKGYCERGTKCEYRH 340
K K SK C ++LKG C G KC + H
Sbjct: 130 KERKKSKFTCKNYLKGKCRFGDKCRFSH 157
>AF045646-5|AAK29828.1| 225|Caenorhabditis elegans Hypothetical
protein F56B3.3 protein.
Length = 225
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = -3
Query: 533 PQSALVSSSLV*CPDSICNPYFFHFDF--LQHFHSYLVFPYVDFLLLTMLFVLSSS 372
P+ +S+S P S PYFF + F QH H L +DFL + F+ +S
Sbjct: 49 PRPPSLSASSSPAPGSARKPYFFLYIFHHHQHLHQLLHLELLDFLQKSDFFLFVNS 104
>Z82267-5|CAB05193.1| 203|Caenorhabditis elegans Hypothetical
protein F38C2.7 protein.
Length = 203
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/45 (24%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +2
Query: 266 NKNSKLCSDF-LKGYCERGTKCEYRHVNITNETKKRLMRTKQITL 397
N + LC++F G+C+ G +C++ H ++ + + + + + IT+
Sbjct: 129 NYKTVLCNNFSTTGHCKYGIRCQFIHRSMNSTSSNQSNKMENITI 173
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +2
Query: 260 KLNKNSKLCSDFL-KGYCERGTKCEYRH 340
K + + C DF +GYC RG +C Y H
Sbjct: 204 KSRSSRRRCKDFEERGYCIRGDQCPYYH 231
>AL110495-2|CAB60410.1| 203|Caenorhabditis elegans Hypothetical
protein Y60A9.3 protein.
Length = 203
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/45 (24%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 266 NKNSKLCSDF-LKGYCERGTKCEYRHVNITNETKKRLMRTKQITL 397
N + LC+ F G+C+ G +C++ H ++ + + + T+ +T+
Sbjct: 129 NYKTVLCNKFSTTGHCKYGIRCQFIHRSMDSTSSNQSNETENVTI 173
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
protein F29G6.1 protein.
Length = 1170
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/55 (27%), Positives = 20/55 (36%)
Frame = +3
Query: 84 NCKFLHDKKHVAICRKFLKGICHEDTCLLSHDITSEKMPTCYFYLKGMCTKENCP 248
NC D + +C G+ + C L +I T GMC NCP
Sbjct: 767 NCSMECDNSYDPLCGT--NGVTFTNACSLQKEICESANSTIEVAYTGMCCDTNCP 819
>Z77661-1|CAB01186.1| 341|Caenorhabditis elegans Hypothetical
protein F40G12.1 protein.
Length = 341
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 115 WPFVANF*KVFVMRILVYYLTI*QVRRCLHVIFI 216
W VANF + + I +Y L I + RCL F+
Sbjct: 101 WILVANFARTVCLFIAMYILPIFMIERCLASFFV 134
>AF016418-9|AAK18904.1| 186|Caenorhabditis elegans Hypothetical
protein C49G7.11 protein.
Length = 186
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 144 ICHEDTCLLSHDITSEKMPTCYFYLKGMCTKENCPYL 254
IC T LL+H I +E++ TC++ +K T+ YL
Sbjct: 104 ICAGPTVLLAHGIVAERV-TCHYTVKDKMTEGGYKYL 139
>Z81105-5|CAB03218.2| 331|Caenorhabditis elegans Hypothetical
protein R05D7.5 protein.
Length = 331
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -2
Query: 408 FTFNNVICFVLINRFFVSLVIFTCLYSHFVPL 313
F+ N + CF L+ FV+ I+ C+ + F PL
Sbjct: 14 FSRNRLTCFCLLPASFVNRHIYVCIPNSFSPL 45
>U29157-1|AAA68423.4| 675|Caenorhabditis elegans Hypothetical
protein C34D10.2 protein.
Length = 675
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 230 H*RKLSLFNVKLNKNSKLCSDFLK-GYCERGTKCEYRH 340
H R F+ ++ K++K C+D L+ GYC R C + H
Sbjct: 266 HTRTEQQFHPEIYKSTK-CNDMLEHGYCPRAVFCAFAH 302
>Z82267-3|CAB05191.1| 186|Caenorhabditis elegans Hypothetical
protein F38C2.5 protein.
Length = 186
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/21 (47%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
Frame = +2
Query: 281 LCSDFLK-GYCERGTKCEYRH 340
LC +F + G+C+ GTKC++ H
Sbjct: 120 LCDNFSRTGHCKYGTKCQFIH 140
>U40797-8|AAL08029.1| 332|Caenorhabditis elegans Serpentine
receptor, class u protein7 protein.
Length = 332
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -2
Query: 408 FTFNNV-ICFVLINRFFVSLVIFTCLYSHFVPLSQYPLRKS 289
FTFN + F L+ F+V I+ Y+ FV + QY +K+
Sbjct: 17 FTFNTFPVYFALLPLFYVIPTIYIVNYTIFVFMEQYTRKKT 57
>AL032655-2|CAB60457.1| 561|Caenorhabditis elegans Hypothetical
protein Y6B3B.4 protein.
Length = 561
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 365 KRLMRTKQITLLKVKNQHTEKPNKNESVEESQNERN 472
+R+M K I L+ N+ E K+ SVEE Q E+N
Sbjct: 290 QRVMEVKFIATLQEDNKRYELLAKDASVEEKQLEKN 325
>AF000265-7|AAB52941.1| 893|Caenorhabditis elegans Hypothetical
protein C18E3.3 protein.
Length = 893
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -2
Query: 195 SSHLLYREIIDKYPHDKYLLKI-CDKWPHVFY 103
+SH+LY++I+ ++LK+ D PH FY
Sbjct: 838 NSHILYKKIMSDLVRTMFILKLDSDGKPHFFY 869
>Z81142-8|CAO82053.1| 370|Caenorhabditis elegans Hypothetical
protein ZK1037.13 protein.
Length = 370
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/75 (17%), Positives = 32/75 (42%)
Frame = +2
Query: 302 GYCERGTKCEYRHVNITNETKKRLMRTKQITLLKVKNQHTEKPNKNESVEESQNERNMDC 481
G C++ + CE H + + RL + + + QH + + ++ + + D
Sbjct: 77 GDCKKQSACEINHESKNSCRSCRLQKCLNVGMNPKAIQHRDPIGQRSPPKDDSDSQKSDL 136
Query: 482 RYYRDIKPNSKIPKQ 526
++ D++ +I Q
Sbjct: 137 QFLLDLQKKQRIRNQ 151
>Z68119-3|CAA92194.1| 131|Caenorhabditis elegans Hypothetical
protein T18D3.5 protein.
Length = 131
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 8/48 (16%)
Frame = +2
Query: 401 KVKNQHTEKPNK--NESVEE--SQNERNMD----CRYYRDIKPNSKIP 520
K N+H E+ K N+ ++ + ER++D C YY + KP+ KIP
Sbjct: 84 KQTNKHLERVEKDFNDMFQKLCEKYERDLDSDGCCDYYEENKPSEKIP 131
>U46674-4|AAA85756.1| 574|Caenorhabditis elegans Hypothetical
protein T26A8.4 protein.
Length = 574
Score = 27.9 bits (59), Expect = 8.8
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 278 KLCSDFLKGYCERGTKCEYRH 340
++C F +GYC G C Y H
Sbjct: 169 QICKFFREGYCRDGDNCLYSH 189
>AL117204-11|CAB55126.1| 201|Caenorhabditis elegans Hypothetical
protein Y116A8C.20 protein.
Length = 201
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +2
Query: 266 NKNSKLCSDFLK-GYCERGTKCEYRH--VNITNETK 364
N + LC F GYC+ G +C++ H ++ TN T+
Sbjct: 129 NYKTVLCDKFTTTGYCKYGIRCQFIHRSMDATNVTR 164
>AL117204-8|CAB55123.1| 205|Caenorhabditis elegans Hypothetical
protein Y116A8C.17 protein.
Length = 205
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 266 NKNSKLCSDFLK-GYCERGTKCEYRHVNITNETKKRLMRT 382
N + LC F GYC+ G +C++ H ++ + M T
Sbjct: 133 NYKTVLCDKFTTTGYCKYGARCQFIHRSMDTTPAAKPMET 172
>AL032654-10|CAB63391.1| 819|Caenorhabditis elegans Hypothetical
protein Y52B11A.10 protein.
Length = 819
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 341 VNITNETKKRLMRTKQITLLKVKNQHTEKPNKNESVEESQNERNM-DCRYYRDIKPNSK 514
+ +T E KK+ R +Q+ K + + NKN + +S +E +M D + KP ++
Sbjct: 45 MGMTKEDKKKRKRKRQLEAKKEQRKLEYLQNKNRNDGDSDDEEDMEDSEDEEEKKPTNR 103
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,274,585
Number of Sequences: 27780
Number of extensions: 397564
Number of successful extensions: 1300
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1297
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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