Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0781.Seq
         (743 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.       29   0.15 
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    26   1.1  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    26   1.4  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    25   3.3  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    24   5.7  
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    23   7.5  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   10.0 

>DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.
          Length = 511

 Score = 29.1 bits (62), Expect = 0.15
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = -2

Query: 727 VEVPSASAFDANGLLDDAPLGSTPTTVFKQEREEPEKIKI 608
           +E  +  A DA+  LDDA +  TP ++ + + E+PEK+ +
Sbjct: 191 MEAMNEVAADAD--LDDAKMKKTPDSIDRVDHEQPEKMSL 228


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = -3

Query: 708 QHLMLTVCWMMLHWDPLQQQYSNKNV--RNLRRSKYGEKYKRTDSKRKMLR 562
           +H+ +T     + W+ L ++Y N  V  R   ++ Y  +  +TDS  ++ R
Sbjct: 179 EHMQITADNYYVTWEALLKRYDNSKVLKREYFKAFYSLEKMKTDSTEELAR 229


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +1

Query: 205 CDLRKRTDNIIRYYTNWMLFQA 270
           C  RK  DN+  YY  WM  QA
Sbjct: 25  CTGRKHKDNVKFYYQKWMEEQA 46


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
 Frame = -3

Query: 741 GLTILSKYPVHQ--HLMLTVCWMMLHWDPLQQQYSNK---NVRNLR 619
           GLT++    V +   L++T  W+ L W+ +  ++++     VR+LR
Sbjct: 37  GLTLMQIIDVDEKNQLLITNIWLKLEWNDMNVRWNSSEYGGVRDLR 82


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
 Frame = -3

Query: 741 GLTILSKYPVHQ--HLMLTVCWMMLHWDPLQQQYSNK---NVRNLR 619
           GLT++    V +   L++T  W+ L W+ +  +++      VR+LR
Sbjct: 69  GLTLMQIIDVDEKNQLLVTNIWLKLEWNDMNLRWNTSEYGGVRDLR 114


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 624 GSSRSCLNTVVGVDPNGASSNRPLASNAD 710
           G SRS ++  +  +  G S+ RP  + AD
Sbjct: 33  GRSRSFVDNAIRSEATGKSTGRPRKTTAD 61


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -3

Query: 615  SKYGEKYKRTDSKRKMLRKNKRSKKCFR*PRKNWRTVQIT 496
            +K+G+  K TD +R  +      K  FR   +N+R  + T
Sbjct: 2199 AKFGKPEKLTDGRRVRVTVEVFGKGTFRGIGRNYRIAKCT 2238


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 719,896
Number of Sequences: 2352
Number of extensions: 14164
Number of successful extensions: 23
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)