Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0781.Seq
(743 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77661-8|CAB01189.1| 438|Caenorhabditis elegans Hypothetical pr... 30 2.0
EU068466-1|ABU49431.1| 801|Caenorhabditis elegans PRO-3 protein. 30 2.0
AL132948-40|CAD31812.3| 801|Caenorhabditis elegans Hypothetical... 30 2.0
AL031629-3|CAA20976.1| 555|Caenorhabditis elegans Hypothetical ... 29 4.6
Z81112-6|CAB03277.1| 673|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z77136-10|CAB00887.1| 673|Caenorhabditis elegans Hypothetical p... 28 6.1
Z35719-5|CAE45044.1| 296|Caenorhabditis elegans Hypothetical pr... 28 6.1
U23168-4|AAU87833.1| 1379|Caenorhabditis elegans Temporarily ass... 28 6.1
U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily ass... 28 6.1
U23168-2|AAC38806.2| 1633|Caenorhabditis elegans Temporarily ass... 28 6.1
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 28 6.1
AL132858-6|CAB60475.1| 412|Caenorhabditis elegans Hypothetical ... 28 6.1
Z95559-10|CAB63364.2| 327|Caenorhabditis elegans Hypothetical p... 28 8.0
AF067943-8|AAO12414.1| 428|Caenorhabditis elegans Hypothetical ... 28 8.0
>Z77661-8|CAB01189.1| 438|Caenorhabditis elegans Hypothetical
protein F40G12.10 protein.
Length = 438
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/45 (28%), Positives = 28/45 (62%)
Frame = +1
Query: 328 TIDRKRATSLPRRGPKSQSSETRAHSFPSSTLLSDPRACARSAFL 462
++ ++R + L RR KS+S+ + + P+S L +DP++ + F+
Sbjct: 28 SMSKERGSELSRRPQKSRSNSKQKATGPTSALPTDPKSKIDTTFM 72
>EU068466-1|ABU49431.1| 801|Caenorhabditis elegans PRO-3 protein.
Length = 801
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -3
Query: 645 SNKNVRNLR-RSKYGEKYKRTDSKRKMLRKNKRSKKC 538
S +NV+ R R K E+ K+ SK+K +K RSK+C
Sbjct: 291 SFRNVKKTRKREKNVERAKKMISKKKKAKKEGRSKEC 327
>AL132948-40|CAD31812.3| 801|Caenorhabditis elegans Hypothetical
protein Y39B6A.14 protein.
Length = 801
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -3
Query: 645 SNKNVRNLR-RSKYGEKYKRTDSKRKMLRKNKRSKKC 538
S +NV+ R R K E+ K+ SK+K +K RSK+C
Sbjct: 291 SFRNVKKTRKREKNVERAKKMISKKKKAKKEGRSKEC 327
>AL031629-3|CAA20976.1| 555|Caenorhabditis elegans Hypothetical
protein Y106G6D.3 protein.
Length = 555
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = -3
Query: 645 SNKNVRNLRRSKYGEKYKRTDSKRKMLRKNKRSKKCFR*PRK 520
SNK+ R+ R + + K++ S+RK + ++S+K R RK
Sbjct: 49 SNKSKRSQRSKRRSAQRKKSSSRRKKKLRKEKSRKSQRSKRK 90
>Z81112-6|CAB03277.1| 673|Caenorhabditis elegans Hypothetical
protein ZC376.3 protein.
Length = 673
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -2
Query: 457 MQSEHKLEDLKVVWRKEMNGPG 392
++SE KLE LK WRK NG G
Sbjct: 591 LKSERKLELLKEKWRKIRNGGG 612
>Z77136-10|CAB00887.1| 673|Caenorhabditis elegans Hypothetical
protein ZC376.3 protein.
Length = 673
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -2
Query: 457 MQSEHKLEDLKVVWRKEMNGPG 392
++SE KLE LK WRK NG G
Sbjct: 591 LKSERKLELLKEKWRKIRNGGG 612
>Z35719-5|CAE45044.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.7 protein.
Length = 296
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = -3
Query: 687 CWMMLHWDPLQQQYSNKNVRNLRRSKYGEKYKRTDSKRKMLRKNKRSK 544
CW+ + ++Q +++R+ RRS + SK ++ NK++K
Sbjct: 230 CWLSNYICGTEKQPEKQSMRSSRRSSRSSNHSAKSSKACRIQANKKNK 277
>U23168-4|AAU87833.1| 1379|Caenorhabditis elegans Temporarily
assigned gene nameprotein 308, isoform d protein.
Length = 1379
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -1
Query: 614 QNMARSTKEPIRRERC*GRTKEARNASDSQERTGGRYKSHEE 489
QN+A + R ER + +E S+ R+GGR SHEE
Sbjct: 361 QNLAEDVIDA-RSERKTAKQREQELLQRSERRSGGRTHSHEE 401
>U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily
assigned gene nameprotein 308, isoform b protein.
Length = 4034
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -1
Query: 614 QNMARSTKEPIRRERC*GRTKEARNASDSQERTGGRYKSHEE 489
QN+A + R ER + +E S+ R+GGR SHEE
Sbjct: 361 QNLAEDVIDA-RSERKTAKQREQELLQRSERRSGGRTHSHEE 401
>U23168-2|AAC38806.2| 1633|Caenorhabditis elegans Temporarily
assigned gene nameprotein 308, isoform a protein.
Length = 1633
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -1
Query: 614 QNMARSTKEPIRRERC*GRTKEARNASDSQERTGGRYKSHEE 489
QN+A + R ER + +E S+ R+GGR SHEE
Sbjct: 361 QNLAEDVIDA-RSERKTAKQREQELLQRSERRSGGRTHSHEE 401
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily
assigned gene nameprotein 308, isoform c protein.
Length = 7548
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -1
Query: 614 QNMARSTKEPIRRERC*GRTKEARNASDSQERTGGRYKSHEE 489
QN+A + R ER + +E S+ R+GGR SHEE
Sbjct: 361 QNLAEDVIDA-RSERKTAKQREQELLQRSERRSGGRTHSHEE 401
>AL132858-6|CAB60475.1| 412|Caenorhabditis elegans Hypothetical
protein Y113G7A.11 protein.
Length = 412
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = -2
Query: 355 GMWHAYGQLCFSSSKLDLAQTTHHVLLKWLEITSSLYNILLYYQSAFEDHINYFYK 188
G W + L F+S +L H LL WL + L Y+ F+D N YK
Sbjct: 193 GTWDVFLDL-FASGQLAFGDYFEH-LLSWLPCLKDDNVLFLKYEDMFQDLENAVYK 246
>Z95559-10|CAB63364.2| 327|Caenorhabditis elegans Hypothetical
protein Y41E3.15 protein.
Length = 327
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 401 IHFL-PPHYFQILELVLALHSCWQL*FWKSVLHVICTV 511
I FL PP + I + L HSC+++ + S++ +I TV
Sbjct: 47 IEFLYPPIIYLIFKTKLIRHSCYKIIVFLSIIDMIATV 84
>AF067943-8|AAO12414.1| 428|Caenorhabditis elegans Hypothetical
protein F59B1.10 protein.
Length = 428
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 630 RNLRRSKYGEKYKRTDSKR 574
RNL RS++GEK R + KR
Sbjct: 237 RNLERSRFGEKVDRIEEKR 255
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,002,144
Number of Sequences: 27780
Number of extensions: 338298
Number of successful extensions: 1161
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1161
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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