Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0780.Seq
         (723 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            25   3.1  
AF457554-1|AAL68784.1|  269|Anopheles gambiae salivary gland 1-l...    23   9.6  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    23   9.6  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 354 MCADDAKKRAYLYSTLDNENYHVLASL 274
           +C DD   +  ++ T   E YH LA +
Sbjct: 66  LCIDDTTVKFEIWDTAGQERYHSLAPM 92


>AF457554-1|AAL68784.1|  269|Anopheles gambiae salivary gland 1-like
           3 protein protein.
          Length = 269

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +1

Query: 88  QATVGDADPANRPGLLDLK 144
           +ATVG AD A R  L D+K
Sbjct: 226 EATVGQADAAVRQALDDVK 244


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 170 TNWPALRRMMPRKPTSRSSK 229
           TN  AL RMMP +   RSS+
Sbjct: 740 TNTNALVRMMPNRSGPRSSR 759


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 644,162
Number of Sequences: 2352
Number of extensions: 12266
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)