Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0780.Seq
         (723 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003140-9|AAB54171.1|   86|Caenorhabditis elegans Acyl-coenzyme...   100   2e-21
Z46794-8|CAA86779.1|  385|Caenorhabditis elegans Hypothetical pr...    77   2e-14
Z68004-6|CAA91987.2|  116|Caenorhabditis elegans Hypothetical pr...    56   3e-08
Z92826-2|CAB07319.1|  266|Caenorhabditis elegans Hypothetical pr...    51   1e-06
AL023828-1|CAA19448.1|  115|Caenorhabditis elegans Hypothetical ...    49   4e-06
Z81120-7|CAB03343.2|  274|Caenorhabditis elegans Hypothetical pr...    41   8e-04
U00063-1|AAK18960.1|  146|Caenorhabditis elegans Acyl-coenzyme a...    37   0.013
U27312-8|AAZ32809.1|  219|Caenorhabditis elegans Hypothetical pr...    33   0.21 
Z95559-11|CAB09005.2|  435|Caenorhabditis elegans Hypothetical p...    32   0.48 

>AF003140-9|AAB54171.1|   86|Caenorhabditis elegans Acyl-coenzyme a
           binding proteinprotein 1 protein.
          Length = 86

 Score = 99.5 bits (237), Expect = 2e-21
 Identities = 48/82 (58%), Positives = 60/82 (73%)
 Frame = +1

Query: 4   FDQAAANVKNLKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAG 183
           FD AAA VK LK  P++ +LL LYA FKQ TVGD +  ++PG+ DLKGKAK+ AW +  G
Sbjct: 5   FDDAAATVKTLKTSPSNDELLKLYALFKQGTVGD-NTTDKPGMFDLKGKAKWSAWDEKKG 63

Query: 184 TSKDDAQKAYIEIVEGLIASIG 249
            +KDDAQKAY+ +VE LIA  G
Sbjct: 64  LAKDDAQKAYVALVEELIAKYG 85


>Z46794-8|CAA86779.1|  385|Caenorhabditis elegans Hypothetical
           protein R06F6.9 protein.
          Length = 385

 Score = 76.6 bits (180), Expect = 2e-14
 Identities = 36/79 (45%), Positives = 52/79 (65%)
 Frame = +1

Query: 4   FDQAAANVKNLKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAG 183
           F++A  N+K LK  P +   L LY  FKQAT GD     RPG++D  G+AK+DAW+ L G
Sbjct: 29  FEKAQKNLKTLKEEPDNDVKLQLYGLFKQATAGDVQ-GKRPGMMDFVGRAKYDAWNTLKG 87

Query: 184 TSKDDAQKAYIEIVEGLIA 240
            ++D+A+  Y ++V GLI+
Sbjct: 88  QTQDEARANYAKLVGGLIS 106


>Z68004-6|CAA91987.2|  116|Caenorhabditis elegans Hypothetical
           protein F47B10.7 protein.
          Length = 116

 Score = 56.0 bits (129), Expect = 3e-08
 Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
 Frame = +1

Query: 1   KFDQAAANVKNL-KALP---TDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAW 168
           KFD A   ++ L K  P   ++ Q L  Y+ FKQA++GD +  +RPG+  +  + K+D+W
Sbjct: 6   KFDAAVEIIQKLPKTGPVATSNDQKLTFYSLFKQASIGDVN-TDRPGIFSIIERKKWDSW 64

Query: 169 HKLAGTSKDDAQKAYIEIVEGLIASI 246
            +L G S+D+A++ YI+ +  +   I
Sbjct: 65  KELEGVSQDEAKERYIKALNDMFDKI 90


>Z92826-2|CAB07319.1|  266|Caenorhabditis elegans Hypothetical
           protein C18D11.2 protein.
          Length = 266

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 23/54 (42%), Positives = 36/54 (66%)
 Frame = +1

Query: 64  LNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGTSKDDAQKAYIEIV 225
           LN YA FKQAT G  D   +P   D++G  K++AW+KL   + D+A++AY++ +
Sbjct: 28  LNFYALFKQATHGKCD-LPKPSFYDIQGVYKWNAWNKLDNMTMDEAKQAYVDSI 80


>AL023828-1|CAA19448.1|  115|Caenorhabditis elegans Hypothetical
           protein Y17G7B.1 protein.
          Length = 115

 Score = 48.8 bits (111), Expect = 4e-06
 Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
 Frame = +1

Query: 4   FDQAAANVKNLKALPTDAQLLNLYAHFKQATVGDA--DPANRPGLLDLKGKAKFDAWHKL 177
           F+ AA  ++ LK+ PTD + L LYA +KQA  GD   +        D  G+ K+ AW   
Sbjct: 15  FEIAAEEMRRLKSEPTDRERLKLYALYKQALHGDIPNEDVYPVPAGDEVGRKKYAAWKSQ 74

Query: 178 AGTSKDDAQKAYIEIVEGLIASIG 249
            G + +  +  Y+ I E +I   G
Sbjct: 75  KGANSEKCRADYVAIAEEMIKKYG 98


>Z81120-7|CAB03343.2|  274|Caenorhabditis elegans Hypothetical
           protein T12D8.3 protein.
          Length = 274

 Score = 41.1 bits (92), Expect = 8e-04
 Identities = 23/81 (28%), Positives = 35/81 (43%)
 Frame = +1

Query: 1   KFDQAAANVKNLKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLA 180
           KFD A   +           +L  Y  +KQA  G AD    P   +   + KF++W   +
Sbjct: 31  KFDAATTRLPGFLTKIDQKTILKFYGLYKQAVEGPADSKKGPYWFETVARKKFNSWLANS 90

Query: 181 GTSKDDAQKAYIEIVEGLIAS 243
             S+  A +AY E++  L  S
Sbjct: 91  QMSRSRAMEAYCELMAQLDTS 111


>U00063-1|AAK18960.1|  146|Caenorhabditis elegans Acyl-coenzyme a
           binding proteinprotein 4 protein.
          Length = 146

 Score = 37.1 bits (82), Expect = 0.013
 Identities = 16/52 (30%), Positives = 31/52 (59%)
 Frame = +1

Query: 64  LNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGTSKDDAQKAYIE 219
           L +Y+ +KQAT G  D   +P    ++ + K++AW++L    + +A+  Y+E
Sbjct: 33  LQMYSLYKQATSGKCDTI-QPYFFQIEQRMKWNAWNQLGNMDEAEAKAQYVE 83


>U27312-8|AAZ32809.1|  219|Caenorhabditis elegans Hypothetical
           protein F26A1.15 protein.
          Length = 219

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = +1

Query: 139 LKGKAKFDAWHKLAGTSKDDAQKAYIEIVEGL 234
           + G  K+ AW+K  G +K++A + Y+E V+ L
Sbjct: 157 INGNEKWHAWNKCRGLTKEEASEQYVEAVQKL 188


>Z95559-11|CAB09005.2|  435|Caenorhabditis elegans Hypothetical
           protein Y41E3.7a protein.
          Length = 435

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = +1

Query: 64  LNLYAHFKQATVGD-ADPANRPGLLDLKGKAKFDAWHKLAGTSKDDAQKAYIEIVE 228
           + L +  KQ   G+ +D  +  G LD+ G     AW +L   S+D+A  +++ +V+
Sbjct: 51  IKLLSLSKQVQHGEISDEFDNAGWLDITGNDVNKAWRELGSLSRDEAMASFVFLVD 106


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,287,504
Number of Sequences: 27780
Number of extensions: 275553
Number of successful extensions: 605
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 601
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)