Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0779.Seq
         (470 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   0.62 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   0.62 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   0.62 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   0.62 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   5.7  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.62
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 368  FCVSCYFLYLVKLPSRYLLL 309
            +C+    +YL+ +PS YLLL
Sbjct: 1027 WCIVPGIIYLLSIPSMYLLL 1046


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.62
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 368  FCVSCYFLYLVKLPSRYLLL 309
            +C+    +YL+ +PS YLLL
Sbjct: 1027 WCIVPGIIYLLSIPSMYLLL 1046


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.62
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 368  FCVSCYFLYLVKLPSRYLLL 309
            +C+    +YL+ +PS YLLL
Sbjct: 1027 WCIVPGIIYLLSIPSMYLLL 1046


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.62
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 368  FCVSCYFLYLVKLPSRYLLL 309
            +C+    +YL+ +PS YLLL
Sbjct: 1027 WCIVPGIIYLLSIPSMYLLL 1046


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 365  CVSCYFLYLVKLPSRYLLLRVRS 297
            C+    +Y V +PS YLLL + S
Sbjct: 1001 CLKYGVIYYVTVPSMYLLLVIYS 1023


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 365  CVSCYFLYLVKLPSRYLLLRVRS 297
            C+    +Y V +PS YLLL + S
Sbjct: 1001 CLKYGVIYYVTVPSMYLLLVIYS 1023


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = -2

Query: 349 FYIW*SCLPVIFYFGYALL*TFTDFRFICIIFLEEVPL 236
           FY     L  ++YF YA +       F+  I+   VPL
Sbjct: 103 FYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPL 140


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,908
Number of Sequences: 336
Number of extensions: 873
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10931752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)