Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0777.Seq
(608 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003130-1|AAB54124.2| 423|Caenorhabditis elegans Hypothetical ... 36 0.030
U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical pr... 32 0.28
U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical pr... 32 0.28
Z74032-2|CAA98466.2| 248|Caenorhabditis elegans Hypothetical pr... 32 0.37
Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical pr... 31 0.64
Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical pr... 31 0.64
Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical pr... 31 0.64
Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical p... 31 0.64
Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical pr... 31 0.64
Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical pr... 31 0.64
AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP ... 31 0.64
AL132862-12|CAB60542.1| 380|Caenorhabditis elegans Hypothetical... 29 2.0
Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical pr... 29 2.6
U53147-4|AAA96115.1| 668|Caenorhabditis elegans Temporarily ass... 29 2.6
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 29 2.6
Z81133-5|CAB03442.2| 1838|Caenorhabditis elegans Hypothetical pr... 28 4.5
L13200-7|AAA28189.1| 206|Caenorhabditis elegans Prion-like-(q/n... 28 4.5
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 28 6.0
U67955-3|AAO91745.1| 655|Caenorhabditis elegans Hypothetical pr... 28 6.0
U67955-2|AAB07583.2| 791|Caenorhabditis elegans Hypothetical pr... 28 6.0
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 28 6.0
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 28 6.0
>AF003130-1|AAB54124.2| 423|Caenorhabditis elegans Hypothetical
protein F55A12.6 protein.
Length = 423
Score = 35.5 bits (78), Expect = 0.030
Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +3
Query: 114 YPYNPYYGNVDSLSYGSGDSNR--GGLVMSRYYNPYYNPRAVGGG 242
Y N YYGN YG+G N+ GG + YYN YYN GG
Sbjct: 138 YYGNGYYGNGYGNGYGNGYYNQYNGGYGGNGYYNQYYNGNNYYGG 182
>U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical
protein F41H10.3b protein.
Length = 1005
Score = 32.3 bits (70), Expect = 0.28
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 8/80 (10%)
Frame = +2
Query: 293 GQVYIPDRRRQTLADTSYVPQQENEVYYPQQPENPIFSPT--------QATELADPTEKI 448
G+ Y P++ + + + Y+P + PQQP P+ +P Q T+ P+
Sbjct: 659 GKEYAPEQYARDIIE-HYIPAARDHPPQPQQPPPPLPTPKPPRRRKSGQKTDQTTPSSDA 717
Query: 449 ELYSTTLVPVAKATEAPAAP 508
E S PV A AP P
Sbjct: 718 EASSDPAPPVPAAPVAPVVP 737
>U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical
protein F41H10.3a protein.
Length = 1140
Score = 32.3 bits (70), Expect = 0.28
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 8/80 (10%)
Frame = +2
Query: 293 GQVYIPDRRRQTLADTSYVPQQENEVYYPQQPENPIFSPT--------QATELADPTEKI 448
G+ Y P++ + + + Y+P + PQQP P+ +P Q T+ P+
Sbjct: 659 GKEYAPEQYARDIIE-HYIPAARDHPPQPQQPPPPLPTPKPPRRRKSGQKTDQTTPSSDA 717
Query: 449 ELYSTTLVPVAKATEAPAAP 508
E S PV A AP P
Sbjct: 718 EASSDPAPPVPAAPVAPVVP 737
>Z74032-2|CAA98466.2| 248|Caenorhabditis elegans Hypothetical
protein F35B12.3 protein.
Length = 248
Score = 31.9 bits (69), Expect = 0.37
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 81 VMMSCALLVQAYPYNPYYGNVD 146
+++SC +L AYPY+ YGN D
Sbjct: 7 LVVSCGILAAAYPYSQQYGNYD 28
>Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical protein
T01H8.5d protein.
Length = 1931
Score = 31.1 bits (67), Expect = 0.64
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = -2
Query: 436 GVSQFGRLSGAEDRVLWLLRVIDFVF----LLRYVAGIGKGLAATIRYVHLAR*RRLCGF 269
G +GR+ A D VLW ++++D++ L YV GK + + Y+ + L F
Sbjct: 1298 GSVAYGRVILACDSVLWTMKLLDYMSVHPKLGPYVTMAGK-MIQNMSYIIVMLVVTLLSF 1356
Query: 268 GLAVQNAAIPPPT 230
GLA Q+ P T
Sbjct: 1357 GLARQSITYPDET 1369
>Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical protein
T01H8.5c protein.
Length = 1971
Score = 31.1 bits (67), Expect = 0.64
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = -2
Query: 436 GVSQFGRLSGAEDRVLWLLRVIDFVF----LLRYVAGIGKGLAATIRYVHLAR*RRLCGF 269
G +GR+ A D VLW ++++D++ L YV GK + + Y+ + L F
Sbjct: 1338 GSVAYGRVILACDSVLWTMKLLDYMSVHPKLGPYVTMAGK-MIQNMSYIIVMLVVTLLSF 1396
Query: 268 GLAVQNAAIPPPT 230
GLA Q+ P T
Sbjct: 1397 GLARQSITYPDET 1409
>Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical protein
T01H8.5a protein.
Length = 2032
Score = 31.1 bits (67), Expect = 0.64
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = -2
Query: 436 GVSQFGRLSGAEDRVLWLLRVIDFVF----LLRYVAGIGKGLAATIRYVHLAR*RRLCGF 269
G +GR+ A D VLW ++++D++ L YV GK + + Y+ + L F
Sbjct: 1399 GSVAYGRVILACDSVLWTMKLLDYMSVHPKLGPYVTMAGK-MIQNMSYIIVMLVVTLLSF 1457
Query: 268 GLAVQNAAIPPPT 230
GLA Q+ P T
Sbjct: 1458 GLARQSITYPDET 1470
>Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical
protein T01H8.5d protein.
Length = 1931
Score = 31.1 bits (67), Expect = 0.64
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = -2
Query: 436 GVSQFGRLSGAEDRVLWLLRVIDFVF----LLRYVAGIGKGLAATIRYVHLAR*RRLCGF 269
G +GR+ A D VLW ++++D++ L YV GK + + Y+ + L F
Sbjct: 1298 GSVAYGRVILACDSVLWTMKLLDYMSVHPKLGPYVTMAGK-MIQNMSYIIVMLVVTLLSF 1356
Query: 268 GLAVQNAAIPPPT 230
GLA Q+ P T
Sbjct: 1357 GLARQSITYPDET 1369
>Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical protein
T01H8.5c protein.
Length = 1971
Score = 31.1 bits (67), Expect = 0.64
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = -2
Query: 436 GVSQFGRLSGAEDRVLWLLRVIDFVF----LLRYVAGIGKGLAATIRYVHLAR*RRLCGF 269
G +GR+ A D VLW ++++D++ L YV GK + + Y+ + L F
Sbjct: 1338 GSVAYGRVILACDSVLWTMKLLDYMSVHPKLGPYVTMAGK-MIQNMSYIIVMLVVTLLSF 1396
Query: 268 GLAVQNAAIPPPT 230
GLA Q+ P T
Sbjct: 1397 GLARQSITYPDET 1409
>Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical protein
T01H8.5a protein.
Length = 2032
Score = 31.1 bits (67), Expect = 0.64
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = -2
Query: 436 GVSQFGRLSGAEDRVLWLLRVIDFVF----LLRYVAGIGKGLAATIRYVHLAR*RRLCGF 269
G +GR+ A D VLW ++++D++ L YV GK + + Y+ + L F
Sbjct: 1399 GSVAYGRVILACDSVLWTMKLLDYMSVHPKLGPYVTMAGK-MIQNMSYIIVMLVVTLLSF 1457
Query: 268 GLAVQNAAIPPPT 230
GLA Q+ P T
Sbjct: 1458 GLARQSITYPDET 1470
>AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP
homologous cationchannel protein.
Length = 1971
Score = 31.1 bits (67), Expect = 0.64
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = -2
Query: 436 GVSQFGRLSGAEDRVLWLLRVIDFVF----LLRYVAGIGKGLAATIRYVHLAR*RRLCGF 269
G +GR+ A D VLW ++++D++ L YV GK + + Y+ + L F
Sbjct: 1338 GSVAYGRVILACDSVLWTMKLLDYMSVHPKLGPYVTMAGK-MIQNMSYIIVMLVVTLLSF 1396
Query: 268 GLAVQNAAIPPPT 230
GLA Q+ P T
Sbjct: 1397 GLARQSITYPDET 1409
>AL132862-12|CAB60542.1| 380|Caenorhabditis elegans Hypothetical
protein Y73F8A.17 protein.
Length = 380
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +3
Query: 78 FVMMSCALLVQAYPYNPYYGNVDSLSYGS 164
F M A YPY+PYY L +GS
Sbjct: 311 FAMNQKASFANQYPYHPYYHQYSQLDHGS 339
>Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical
protein E01G4.4 protein.
Length = 534
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 260 RQPEAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEVYYPQQPEN 394
+Q + P Y P R++Q +Y P+Q+ + Y QQ +N
Sbjct: 39 QQQQQQGRPQQYAGYPPQRQQQQYNMNAYAPRQQQQQQYQQQQQN 83
>U53147-4|AAA96115.1| 668|Caenorhabditis elegans Temporarily
assigned gene nameprotein 117 protein.
Length = 668
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 326 SGGDDQVCTPGPLKAPVRLRAGGTERGHTTAHSSGVVVR 210
SGGD CT P+ + G +ER +T+ SS V R
Sbjct: 190 SGGDSSSCTSSPIPPVIMNGNGKSERCPSTSSSSSVSPR 228
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 344 YVPQQENEVYYPQQPENPIFSPTQATELADPTEKIE 451
YVPQ+ P PE +P+Q + +PT IE
Sbjct: 1812 YVPQETQAPIAPSNPEPVQPNPSQTVSIPEPTGNIE 1847
>Z81133-5|CAB03442.2| 1838|Caenorhabditis elegans Hypothetical protein
T28B8.3a protein.
Length = 1838
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 169 IVTEEAWS*AVTTILTTTPELWAVVW 246
I EEAWS A+ TIL T +L V W
Sbjct: 1431 IEAEEAWSIAMETILDPTSDLRRVWW 1456
>L13200-7|AAA28189.1| 206|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 96
protein.
Length = 206
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 350 PQQENEVYYPQQPENPIFSPTQATELA 430
PQQ+ Y PQQP +PI A +A
Sbjct: 6 PQQQQPGYQPQQPSHPIVGAGAAPTMA 32
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 27.9 bits (59), Expect = 6.0
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +2
Query: 266 PEAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEVYYPQQPENPIFSPT 412
P++ QAPS +Q A T +PQ + P QP + I PT
Sbjct: 121 PQSVQAPSATPAGPLQAMQQAPAPTPGIPQMNQGAHLPPQP-HQIHQPT 168
>U67955-3|AAO91745.1| 655|Caenorhabditis elegans Hypothetical
protein C16H3.3b protein.
Length = 655
Score = 27.9 bits (59), Expect = 6.0
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Frame = +2
Query: 269 EAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEVYYPQQPENPIFSPTQATELADPTEKI 448
E +T ++Y + + L T P EN + + + P+F PT+ T+ +P +I
Sbjct: 92 EPMSESNTEEIYEESPKIEEL--TIKEPVIEN-ISFNNEIAEPLFKPTELTKNTNPVNEI 148
Query: 449 ELYSTT--LVPVAKAT--EAPAAP 508
E TT L+ ++T E P +P
Sbjct: 149 ETPITTEELITETQSTVAENPTSP 172
>U67955-2|AAB07583.2| 791|Caenorhabditis elegans Hypothetical
protein C16H3.3a protein.
Length = 791
Score = 27.9 bits (59), Expect = 6.0
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Frame = +2
Query: 269 EAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEVYYPQQPENPIFSPTQATELADPTEKI 448
E +T ++Y + + L T P EN + + + P+F PT+ T+ +P +I
Sbjct: 228 EPMSESNTEEIYEESPKIEEL--TIKEPVIEN-ISFNNEIAEPLFKPTELTKNTNPVNEI 284
Query: 449 ELYSTT--LVPVAKAT--EAPAAP 508
E TT L+ ++T E P +P
Sbjct: 285 ETPITTEELITETQSTVAENPTSP 308
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical protein
K07E12.1a protein.
Length = 13100
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 94 ARYWCKRIPTIPTMETWTPFPTARAIVT 177
A Y CK +P + T TW P P +A T
Sbjct: 12338 ADYICKIVPNVETSRTW-PTPRTKATTT 12364
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin protein.
Length = 13100
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 94 ARYWCKRIPTIPTMETWTPFPTARAIVT 177
A Y CK +P + T TW P P +A T
Sbjct: 12338 ADYICKIVPNVETSRTW-PTPRTKATTT 12364
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,604,565
Number of Sequences: 27780
Number of extensions: 281704
Number of successful extensions: 1053
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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