Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0776.Seq
         (647 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB7463 Cluster: PREDICTED: similar to sterile al...    48   1e-04
UniRef50_Q7PT20 Cluster: ENSANGP00000021615; n=1; Anopheles gamb...    48   1e-04
UniRef50_A7RJ95 Cluster: Predicted protein; n=1; Nematostella ve...    42   0.017
UniRef50_UPI0000D55C4D Cluster: PREDICTED: similar to Sterile al...    41   0.030
UniRef50_Q23972 Cluster: Protein Smaug; n=4; Sophophora|Rep: Pro...    41   0.030
UniRef50_UPI0000E24178 Cluster: PREDICTED: hypothetical protein;...    33   6.0  
UniRef50_Q8I471 Cluster: 50S ribosomal subunit protein L28, puta...    33   6.0  

>UniRef50_UPI0000DB7463 Cluster: PREDICTED: similar to sterile alpha
           motif domain containing 4B; n=2; Apocrita|Rep:
           PREDICTED: similar to sterile alpha motif domain
           containing 4B - Apis mellifera
          Length = 613

 Score = 48.4 bits (110), Expect = 1e-04
 Identities = 24/66 (36%), Positives = 38/66 (57%)
 Frame = +1

Query: 253 GGVTGVFEQWGACEKTVTACVLARRVPWPGLRLVQRAVEAALRNHVEDERLQRDANDEAL 432
           G +T VF QW  CE+TV    L RR+P    R + +AV+ +L +  E +  + +AN+   
Sbjct: 14  GELTRVFSQWNECEQTVVLYALLRRIPAVQARFLAQAVQHSLHSVSELDTQELNANNPGF 73

Query: 433 LTSLLT 450
           + SLL+
Sbjct: 74  INSLLS 79


>UniRef50_Q7PT20 Cluster: ENSANGP00000021615; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000021615 - Anopheles gambiae
           str. PEST
          Length = 733

 Score = 48.4 bits (110), Expect = 1e-04
 Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
 Frame = +1

Query: 253 GGVTGVFEQWGACEKTVTACVLARRVPWPGLRLVQRAVEAAL-RNHVEDERLQR---DAN 420
           G VT +FEQW  CE+TV    L +RVP+  L+ +Q +++  L +N+    +LQ+    AN
Sbjct: 17  GTVTSLFEQWNDCERTVVLYALLKRVPFVNLKFLQVSIDYNLAQNYSTQAKLQQLETKAN 76

Query: 421 DEALLTSLL 447
             ALL  L+
Sbjct: 77  STALLGKLV 85


>UniRef50_A7RJ95 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 431

 Score = 41.5 bits (93), Expect = 0.017
 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
 Frame = +1

Query: 259 VTGVFEQWGACEKTVTACVLARRVPWPGLRLVQRAVEAALRNH-VEDERLQRDANDEALL 435
           + G F  W  CE+T+    L +R+     R +   +E   R+  VE + LQR AND+  L
Sbjct: 15  LVGWFSNWNECEQTIALYTLLKRISTTQARFLSLILEHTFRDDPVEIQLLQRQANDKEFL 74

Query: 436 TSL 444
           ++L
Sbjct: 75  SNL 77


>UniRef50_UPI0000D55C4D Cluster: PREDICTED: similar to Sterile alpha
           motif domain-containing protein 4; n=1; Tribolium
           castaneum|Rep: PREDICTED: similar to Sterile alpha motif
           domain-containing protein 4 - Tribolium castaneum
          Length = 445

 Score = 40.7 bits (91), Expect = 0.030
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
 Frame = +1

Query: 271 FEQWGACEKTVTACVLARRVPWPGLRLVQRAVE--AALRNHVEDERLQRDANDEALLTSL 444
           F +W +CE+TV    L   +P+   R +Q A+E   A  N  E + L+R+AN+   +  L
Sbjct: 24  FHKWDSCERTVALYYLMTGLPFANARFLQHALEQCIAAANSPEAQVLERNANNSVFVARL 83

Query: 445 L 447
           L
Sbjct: 84  L 84


>UniRef50_Q23972 Cluster: Protein Smaug; n=4; Sophophora|Rep:
           Protein Smaug - Drosophila melanogaster (Fruit fly)
          Length = 999

 Score = 40.7 bits (91), Expect = 0.030
 Identities = 15/44 (34%), Positives = 29/44 (65%)
 Frame = +1

Query: 259 VTGVFEQWGACEKTVTACVLARRVPWPGLRLVQRAVEAALRNHV 390
           VT +FE+W  CE+TV    L +R+ +P L+ +Q ++++ L  ++
Sbjct: 81  VTNLFEKWNDCERTVVMYALLKRLRYPSLKFLQYSIDSNLTQNL 124


>UniRef50_UPI0000E24178 Cluster: PREDICTED: hypothetical protein;
           n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
           protein - Pan troglodytes
          Length = 147

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 20/48 (41%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = -1

Query: 344 SPGQGTRLASTQAVTVFSHAPHCSNTPVTP-PAAHKTCRSLRQHHSSP 204
           SPG GTR  S     V     H S  P +P PAA   CR LR   + P
Sbjct: 94  SPGPGTRNRSLHRNAVSLRQTHESPLPCSPSPAARPRCRLLRLREAPP 141


>UniRef50_Q8I471 Cluster: 50S ribosomal subunit protein L28,
           putative; n=6; Plasmodium|Rep: 50S ribosomal subunit
           protein L28, putative - Plasmodium falciparum (isolate
           3D7)
          Length = 302

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = -2

Query: 421 HSRLSGVVRLPHDS*VQPLRPAALILVLAKGPVWRAHRLSQS-FRMHPTARIPLLHPQLL 245
           H R++ V  LPH     P+R  A   +L K   W A ++S+S  R H   R+ L++ ++ 
Sbjct: 149 HKRINKVTMLPHKEIKLPIRRCA---ILGKMDNWNARKISKSGVRTHRIQRLNLINKRIF 205

Query: 244 IK 239
            +
Sbjct: 206 FE 207


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 633,090,853
Number of Sequences: 1657284
Number of extensions: 12464903
Number of successful extensions: 31198
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 30079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31186
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)