Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0776.Seq
(647 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058607-1|AAL13836.1| 999|Drosophila melanogaster LD30037p pro... 41 0.002
AF159852-1|AAD54965.1| 999|Drosophila melanogaster RNA-binding ... 41 0.002
AF132213-1|AAF61321.1| 999|Drosophila melanogaster smaug protei... 41 0.002
AE014296-1566|AAN11981.1| 999|Drosophila melanogaster CG5263-PC... 41 0.002
AE014296-1565|AAF50334.3| 999|Drosophila melanogaster CG5263-PB... 41 0.002
AE014296-1564|AAF50333.3| 999|Drosophila melanogaster CG5263-PA... 41 0.002
BT010313-1|AAQ23631.1| 652|Drosophila melanogaster AT30637p pro... 32 0.77
AE014134-1924|AAF52983.2| 652|Drosophila melanogaster CG17098-P... 32 0.77
AE014134-2966|AAF53696.1| 207|Drosophila melanogaster CG10373-P... 29 5.4
AY118591-1|AAM49960.1| 1145|Drosophila melanogaster LD45339p pro... 28 9.5
AE014297-1957|AAF55143.1| 1145|Drosophila melanogaster CG6623-PA... 28 9.5
AE013599-907|AAF58911.5| 1136|Drosophila melanogaster CG1794-PA,... 28 9.5
>AY058607-1|AAL13836.1| 999|Drosophila melanogaster LD30037p
protein.
Length = 999
Score = 40.7 bits (91), Expect = 0.002
Identities = 15/44 (34%), Positives = 29/44 (65%)
Frame = +1
Query: 259 VTGVFEQWGACEKTVTACVLARRVPWPGLRLVQRAVEAALRNHV 390
VT +FE+W CE+TV L +R+ +P L+ +Q ++++ L ++
Sbjct: 81 VTNLFEKWNDCERTVVMYALLKRLRYPSLKFLQYSIDSNLTQNL 124
Score = 31.5 bits (68), Expect = 1.0
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 501 LNILPLLNTDNERVKDIYMNAMPVLVQ 581
LN+LPLL NE K IY+ +PV V+
Sbjct: 207 LNMLPLLKPGNEEAKLIYLTLIPVAVK 233
>AF159852-1|AAD54965.1| 999|Drosophila melanogaster RNA-binding
protein Smaug protein.
Length = 999
Score = 40.7 bits (91), Expect = 0.002
Identities = 15/44 (34%), Positives = 29/44 (65%)
Frame = +1
Query: 259 VTGVFEQWGACEKTVTACVLARRVPWPGLRLVQRAVEAALRNHV 390
VT +FE+W CE+TV L +R+ +P L+ +Q ++++ L ++
Sbjct: 81 VTNLFEKWNDCERTVVMYALLKRLRYPSLKFLQYSIDSNLTQNL 124
Score = 31.5 bits (68), Expect = 1.0
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 501 LNILPLLNTDNERVKDIYMNAMPVLVQ 581
LN+LPLL NE K IY+ +PV V+
Sbjct: 207 LNMLPLLKPGNEEAKLIYLTLIPVAVK 233
>AF132213-1|AAF61321.1| 999|Drosophila melanogaster smaug protein
protein.
Length = 999
Score = 40.7 bits (91), Expect = 0.002
Identities = 15/44 (34%), Positives = 29/44 (65%)
Frame = +1
Query: 259 VTGVFEQWGACEKTVTACVLARRVPWPGLRLVQRAVEAALRNHV 390
VT +FE+W CE+TV L +R+ +P L+ +Q ++++ L ++
Sbjct: 81 VTNLFEKWNDCERTVVMYALLKRLRYPSLKFLQYSIDSNLTQNL 124
Score = 31.5 bits (68), Expect = 1.0
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 501 LNILPLLNTDNERVKDIYMNAMPVLVQ 581
LN+LPLL NE K IY+ +PV V+
Sbjct: 207 LNMLPLLKPGNEEAKLIYLTLIPVAVK 233
>AE014296-1566|AAN11981.1| 999|Drosophila melanogaster CG5263-PC,
isoform C protein.
Length = 999
Score = 40.7 bits (91), Expect = 0.002
Identities = 15/44 (34%), Positives = 29/44 (65%)
Frame = +1
Query: 259 VTGVFEQWGACEKTVTACVLARRVPWPGLRLVQRAVEAALRNHV 390
VT +FE+W CE+TV L +R+ +P L+ +Q ++++ L ++
Sbjct: 81 VTNLFEKWNDCERTVVMYALLKRLRYPSLKFLQYSIDSNLTQNL 124
Score = 31.5 bits (68), Expect = 1.0
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 501 LNILPLLNTDNERVKDIYMNAMPVLVQ 581
LN+LPLL NE K IY+ +PV V+
Sbjct: 207 LNMLPLLKPGNEEAKLIYLTLIPVAVK 233
>AE014296-1565|AAF50334.3| 999|Drosophila melanogaster CG5263-PB,
isoform B protein.
Length = 999
Score = 40.7 bits (91), Expect = 0.002
Identities = 15/44 (34%), Positives = 29/44 (65%)
Frame = +1
Query: 259 VTGVFEQWGACEKTVTACVLARRVPWPGLRLVQRAVEAALRNHV 390
VT +FE+W CE+TV L +R+ +P L+ +Q ++++ L ++
Sbjct: 81 VTNLFEKWNDCERTVVMYALLKRLRYPSLKFLQYSIDSNLTQNL 124
Score = 31.5 bits (68), Expect = 1.0
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 501 LNILPLLNTDNERVKDIYMNAMPVLVQ 581
LN+LPLL NE K IY+ +PV V+
Sbjct: 207 LNMLPLLKPGNEEAKLIYLTLIPVAVK 233
>AE014296-1564|AAF50333.3| 999|Drosophila melanogaster CG5263-PA,
isoform A protein.
Length = 999
Score = 40.7 bits (91), Expect = 0.002
Identities = 15/44 (34%), Positives = 29/44 (65%)
Frame = +1
Query: 259 VTGVFEQWGACEKTVTACVLARRVPWPGLRLVQRAVEAALRNHV 390
VT +FE+W CE+TV L +R+ +P L+ +Q ++++ L ++
Sbjct: 81 VTNLFEKWNDCERTVVMYALLKRLRYPSLKFLQYSIDSNLTQNL 124
Score = 31.5 bits (68), Expect = 1.0
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 501 LNILPLLNTDNERVKDIYMNAMPVLVQ 581
LN+LPLL NE K IY+ +PV V+
Sbjct: 207 LNMLPLLKPGNEEAKLIYLTLIPVAVK 233
>BT010313-1|AAQ23631.1| 652|Drosophila melanogaster AT30637p
protein.
Length = 652
Score = 31.9 bits (69), Expect = 0.77
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -2
Query: 307 LSQSFRMHPTARIPLLHPQLLIKRAVHCDNTIAAQSQ 197
LS +F MHP R+P++H Q+ + A++ +A Q
Sbjct: 2 LSHAFNMHPQRRVPVIHEQIAKQCALNIVRVASAMPQ 38
>AE014134-1924|AAF52983.2| 652|Drosophila melanogaster CG17098-PA
protein.
Length = 652
Score = 31.9 bits (69), Expect = 0.77
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -2
Query: 307 LSQSFRMHPTARIPLLHPQLLIKRAVHCDNTIAAQSQ 197
LS +F MHP R+P++H Q+ + A++ +A Q
Sbjct: 2 LSHAFNMHPQRRVPVIHEQIAKQCALNIVRVASAMPQ 38
>AE014134-2966|AAF53696.1| 207|Drosophila melanogaster CG10373-PA
protein.
Length = 207
Score = 29.1 bits (62), Expect = 5.4
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 41 AFKIKNITQKLHTDNREKFVLPTPCGSLSRYRGIRAQG 154
+ +++NI KL T++ E F TP GSL +RA+G
Sbjct: 168 SLRLRNIKNKL-TNSIESFAPSTPMGSLLDALNVRAEG 204
>AY118591-1|AAM49960.1| 1145|Drosophila melanogaster LD45339p
protein.
Length = 1145
Score = 28.3 bits (60), Expect = 9.5
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +3
Query: 495 STLNILPLLNTDNERVKDIYMNAMPVLVQRCVDSHEEHHWLQNCP 629
STL + PL+ + + I + + + R V H EHH NCP
Sbjct: 843 STLQV-PLVQFKSFEERRIPLEVLTDMPGRKVSKHHEHHIALNCP 886
>AE014297-1957|AAF55143.1| 1145|Drosophila melanogaster CG6623-PA
protein.
Length = 1145
Score = 28.3 bits (60), Expect = 9.5
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +3
Query: 495 STLNILPLLNTDNERVKDIYMNAMPVLVQRCVDSHEEHHWLQNCP 629
STL + PL+ + + I + + + R V H EHH NCP
Sbjct: 843 STLQV-PLVQFKSFEERRIPLEVLTDMPGRKVSKHHEHHIALNCP 886
>AE013599-907|AAF58911.5| 1136|Drosophila melanogaster CG1794-PA,
isoform A protein.
Length = 1136
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -2
Query: 355 ALILVLAKGPVWRAHRLSQSFRMHPTARIPL 263
A I VL+ P RAHR+S +FR H + L
Sbjct: 402 AFIFVLSAVPDPRAHRISPAFRTHGCCYVTL 432
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,225,440
Number of Sequences: 53049
Number of extensions: 621753
Number of successful extensions: 1719
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1719
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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