Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0775.Seq
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    25   0.72 
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    24   0.95 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.8  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   5.1  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   5.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   6.7  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   6.7  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 24.6 bits (51), Expect = 0.72
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +1

Query: 238  DIKPLSECLIEFISHRNLKHQATAL 312
            ++KP S+ ++  + ++NL HQA  L
Sbjct: 1248 EVKPTSQKIVPNLRNQNLSHQAKNL 1272


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 0.95
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = +3

Query: 390 IFTFLSSTCHLSYS 431
           IFT+LS TC+++Y+
Sbjct: 139 IFTYLSVTCYVTYA 152


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 358 LFSCILHICRLSLLFYRAHVTYHIH 432
           LF C+L I      FY A + + +H
Sbjct: 227 LFYCVLIILLCIYYFYYAFILFTVH 251


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 6/24 (25%), Positives = 11/24 (45%)
 Frame = +3

Query: 489 FIEH*NNHLCDSFNFAIPNSVNKL 560
           +  H   H+CD F + +    N +
Sbjct: 113 YFAHEEPHICDKFYYCVDGKYNMI 136


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = +2

Query: 359 CFLAFYIFVDYLYFFIEHMSLIIF 430
           C+  +   V Y+Y+ +   S+I F
Sbjct: 148 CYFIYLFTVYYIYYSVHEASIINF 171



 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +1

Query: 94  IRYFCSLCECFTNILIVMTRST 159
           I+YFC +  C   ++     ST
Sbjct: 382 IQYFCLMARCLNTLIFYYHIST 403


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -2

Query: 590 YQTCYCYGNDKL 555
           +  CYCY N K+
Sbjct: 270 FSFCYCYYNSKM 281


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 325 NACFEL*T*MTLFSCILHI 381
           N  + + T + LFSC+LH+
Sbjct: 264 NGFYGVHTLLILFSCLLHL 282


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,290
Number of Sequences: 336
Number of extensions: 3056
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)