Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0774.Seq
         (715 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.9  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   4.3  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   5.7  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   9.9  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -2

Query: 660  EMEIFVVFEKI*KNKQYIFLQMV 592
            E+E+F +FE+   NK +  LQ++
Sbjct: 1410 EIEMFSMFERFHVNKLHFLLQII 1432


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +1

Query: 361 QRGKRFTYPRFDLSLVNPFGTMNLDILYCFN 453
           +RG R   P FD       G  N D + CFN
Sbjct: 288 ERGVR-VIPEFDAPAHVGEGWQNTDFVVCFN 317


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 181 NTCRGEDPCRVADGEG 228
           N C+    CR++DG G
Sbjct: 383 NPCQNGGVCRISDGGG 398


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 338 LVTYGGHKQCGSLIIN 291
           LVT+ GHK   + I+N
Sbjct: 389 LVTHSGHKLAKASIVN 404


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,127
Number of Sequences: 336
Number of extensions: 3575
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)