Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0771.Seq
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   4.2  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   5.5  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   5.5  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   5.5  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   5.5  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   7.3  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   9.6  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   9.6  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   9.6  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   9.6  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   9.6  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +2

Query: 272 IIKGGNLCIWTIF 310
           II  G LCIW+IF
Sbjct: 49  IITIGCLCIWSIF 61


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 406 INY*PIFNAGFEPYSL 359
           +NY P  + GF PY +
Sbjct: 330 LNYVPHISTGFSPYEI 345


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = +3

Query: 270 LLSKVAICAFGQFFFIDMSIQIDLNI 347
           LL     C F  F F D S Q  LNI
Sbjct: 285 LLVDSTYCLFLLFVFCDCSHQASLNI 310


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = +3

Query: 270 LLSKVAICAFGQFFFIDMSIQIDLNI 347
           LL     C F  F F D S Q  LNI
Sbjct: 285 LLVDSTYCLFLLFVFCDCSHQASLNI 310


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = +3

Query: 270 LLSKVAICAFGQFFFIDMSIQIDLNI 347
           LL     C F  F F D S Q  LNI
Sbjct: 285 LLVDSTYCLFLLFVFCDCSHQASLNI 310


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 666 FINSNTINVLSLKYFI 619
           F+N   ++  SLKYF+
Sbjct: 299 FVNRGNVSFNSLKYFV 314


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +1

Query: 112 TMCLFLFFTSKHGV 153
           T  LFLFF   HGV
Sbjct: 12  TAALFLFFDLCHGV 25


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +1

Query: 112 TMCLFLFFTSKHGV 153
           T  LFLFF   HGV
Sbjct: 12  TAALFLFFDLCHGV 25


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 608 ICVLIKYFNDNTLIVFELINLTVDITLR 691
           IC ++  F    + + E I L VDI LR
Sbjct: 465 ICGILANFTLEPIDIPETIVLVVDIVLR 492


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 245 LYFFIHESSIIKGG 286
           +Y+ +HE+SII  G
Sbjct: 159 IYYSVHEASIINFG 172


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 608 ICVLIKYFNDNTLIVFELINLTVDITLR 691
           IC ++  F    + + E I L VDI LR
Sbjct: 465 ICGILANFTLEPIDIPETIVLVVDIVLR 492


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,846
Number of Sequences: 336
Number of extensions: 3822
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)