Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0771.Seq
(696 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y17829-1|CAA76877.1| 354|Homo sapiens Syn47 protein protein. 36 0.14
BT009846-1|AAP88848.1| 354|Homo sapiens homer homolog 1 (Drosop... 36 0.14
BC047438-1|AAH47438.1| 354|Homo sapiens homer homolog 1 (Drosop... 36 0.14
BC015502-1|AAH15502.1| 354|Homo sapiens homer homolog 1 (Drosop... 36 0.14
AY189941-1|AAO39001.1| 177|Homo sapiens HOMER1H protein. 36 0.14
AY189939-1|AAO38999.1| 224|Homo sapiens HOMER1E protein. 36 0.14
AK223471-1|BAD97191.1| 354|Homo sapiens homer 1 variant protein. 36 0.14
AF093262-1|AAC71026.1| 354|Homo sapiens homer-1b protein. 36 0.14
Y19028-1|CAB75540.1| 182|Homo sapiens Homer-2 protein, Homer-2D... 30 9.1
Y19027-1|CAB75539.1| 171|Homo sapiens Homer-2 protein, Homer-2C... 30 9.1
Y19026-1|CAB75538.1| 354|Homo sapiens Homer-2 protein, Homer-2B... 30 9.1
Y19025-1|CAB75537.1| 343|Homo sapiens Homer-2 protein, Homer-2A... 30 9.1
BC012109-1|AAH12109.1| 343|Homo sapiens homer homolog 2 (Drosop... 30 9.1
AF093264-1|AAC71028.1| 354|Homo sapiens homer-2b protein. 30 9.1
AF093263-1|AAC71027.1| 343|Homo sapiens homer-2a protein. 30 9.1
AF081530-1|AAD13748.1| 343|Homo sapiens neuralized binding prot... 30 9.1
>Y17829-1|CAA76877.1| 354|Homo sapiens Syn47 protein protein.
Length = 354
Score = 35.9 bits (79), Expect = 0.14
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 581 QSNWLPTSKICVLIKYFNDNTLIVFELINL 670
+ NW+PTSK V + YF D+T V+ +I+L
Sbjct: 21 KKNWVPTSKHAVTVSYFYDSTRNVYRIISL 50
>BT009846-1|AAP88848.1| 354|Homo sapiens homer homolog 1
(Drosophila) protein.
Length = 354
Score = 35.9 bits (79), Expect = 0.14
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 581 QSNWLPTSKICVLIKYFNDNTLIVFELINL 670
+ NW+PTSK V + YF D+T V+ +I+L
Sbjct: 21 KKNWVPTSKHAVTVSYFYDSTRNVYRIISL 50
>BC047438-1|AAH47438.1| 354|Homo sapiens homer homolog 1
(Drosophila) protein.
Length = 354
Score = 35.9 bits (79), Expect = 0.14
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 581 QSNWLPTSKICVLIKYFNDNTLIVFELINL 670
+ NW+PTSK V + YF D+T V+ +I+L
Sbjct: 21 KKNWVPTSKHAVTVSYFYDSTRNVYRIISL 50
>BC015502-1|AAH15502.1| 354|Homo sapiens homer homolog 1
(Drosophila) protein.
Length = 354
Score = 35.9 bits (79), Expect = 0.14
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 581 QSNWLPTSKICVLIKYFNDNTLIVFELINL 670
+ NW+PTSK V + YF D+T V+ +I+L
Sbjct: 21 KKNWVPTSKHAVTVSYFYDSTRNVYRIISL 50
>AY189941-1|AAO39001.1| 177|Homo sapiens HOMER1H protein.
Length = 177
Score = 35.9 bits (79), Expect = 0.14
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 581 QSNWLPTSKICVLIKYFNDNTLIVFELINL 670
+ NW+PTSK V + YF D+T V+ +I+L
Sbjct: 21 KKNWVPTSKHAVTVSYFYDSTRNVYRIISL 50
>AY189939-1|AAO38999.1| 224|Homo sapiens HOMER1E protein.
Length = 224
Score = 35.9 bits (79), Expect = 0.14
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 581 QSNWLPTSKICVLIKYFNDNTLIVFELINL 670
+ NW+PTSK V + YF D+T V+ +I+L
Sbjct: 21 KKNWVPTSKHAVTVSYFYDSTRNVYRIISL 50
>AK223471-1|BAD97191.1| 354|Homo sapiens homer 1 variant protein.
Length = 354
Score = 35.9 bits (79), Expect = 0.14
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 581 QSNWLPTSKICVLIKYFNDNTLIVFELINL 670
+ NW+PTSK V + YF D+T V+ +I+L
Sbjct: 21 KKNWVPTSKHAVTVSYFYDSTRNVYRIISL 50
>AF093262-1|AAC71026.1| 354|Homo sapiens homer-1b protein.
Length = 354
Score = 35.9 bits (79), Expect = 0.14
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 581 QSNWLPTSKICVLIKYFNDNTLIVFELINL 670
+ NW+PTSK V + YF D+T V+ +I+L
Sbjct: 21 KKNWVPTSKHAVTVSYFYDSTRNVYRIISL 50
>Y19028-1|CAB75540.1| 182|Homo sapiens Homer-2 protein, Homer-2D
splicing form protein.
Length = 182
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 542 TERINLYYRCTVNQSNWLPTSKICVLIKYFNDNTLIVFELINL 670
T R +++ + NW+P SK V + YF D T + +I++
Sbjct: 8 TTRAHVFQIDPNTKKNWMPASKQAVTVSYFYDVTRNSYRIISV 50
>Y19027-1|CAB75539.1| 171|Homo sapiens Homer-2 protein, Homer-2C
splicing form protein.
Length = 171
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 542 TERINLYYRCTVNQSNWLPTSKICVLIKYFNDNTLIVFELINL 670
T R +++ + NW+P SK V + YF D T + +I++
Sbjct: 8 TTRAHVFQIDPNTKKNWMPASKQAVTVSYFYDVTRNSYRIISV 50
>Y19026-1|CAB75538.1| 354|Homo sapiens Homer-2 protein, Homer-2B
splicing form protein.
Length = 354
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 542 TERINLYYRCTVNQSNWLPTSKICVLIKYFNDNTLIVFELINL 670
T R +++ + NW+P SK V + YF D T + +I++
Sbjct: 8 TTRAHVFQIDPNTKKNWMPASKQAVTVSYFYDVTRNSYRIISV 50
>Y19025-1|CAB75537.1| 343|Homo sapiens Homer-2 protein, Homer-2A
splicing form protein.
Length = 343
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 542 TERINLYYRCTVNQSNWLPTSKICVLIKYFNDNTLIVFELINL 670
T R +++ + NW+P SK V + YF D T + +I++
Sbjct: 8 TTRAHVFQIDPNTKKNWMPASKQAVTVSYFYDVTRNSYRIISV 50
>BC012109-1|AAH12109.1| 343|Homo sapiens homer homolog 2
(Drosophila) protein.
Length = 343
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 542 TERINLYYRCTVNQSNWLPTSKICVLIKYFNDNTLIVFELINL 670
T R +++ + NW+P SK V + YF D T + +I++
Sbjct: 8 TTRAHVFQIDPNTKKNWMPASKQAVTVSYFYDVTRNSYRIISV 50
>AF093264-1|AAC71028.1| 354|Homo sapiens homer-2b protein.
Length = 354
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 542 TERINLYYRCTVNQSNWLPTSKICVLIKYFNDNTLIVFELINL 670
T R +++ + NW+P SK V + YF D T + +I++
Sbjct: 8 TTRAHVFQIDPNTKKNWMPASKQAVTVSYFYDVTRNSYRIISV 50
>AF093263-1|AAC71027.1| 343|Homo sapiens homer-2a protein.
Length = 343
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 542 TERINLYYRCTVNQSNWLPTSKICVLIKYFNDNTLIVFELINL 670
T R +++ + NW+P SK V + YF D T + +I++
Sbjct: 8 TTRAHVFQIDPNTKKNWMPASKQAVTVSYFYDVTRNSYRIISV 50
>AF081530-1|AAD13748.1| 343|Homo sapiens neuralized binding protein
protein.
Length = 343
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 542 TERINLYYRCTVNQSNWLPTSKICVLIKYFNDNTLIVFELINL 670
T R +++ + NW+P SK V + YF D T + +I++
Sbjct: 8 TTRAHVFQIDPNTKKNWMPASKQAVTVSYFYDVTRNSYRIISV 50
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,737,719
Number of Sequences: 237096
Number of extensions: 1770112
Number of successful extensions: 2117
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2117
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -