Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0771.Seq
         (696 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   2.8  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          23   2.8  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           22   4.8  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   6.4  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   6.4  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   6.4  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    21   8.5  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   8.5  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +2

Query: 620 IKYFNDNTLIVFELINLTVDI 682
           IKY NDN ++  + IN+ +++
Sbjct: 257 IKYRNDNNIVRPDFINMLMEL 277


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 27  STVT*RRIITEHVKVFTANK 86
           ST T   I  +H+KVF  NK
Sbjct: 391 STTTSTTISQKHIKVFVVNK 410


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 224 LYRYSLLLYFFIHESS 271
           ++RY LL+Y F  +SS
Sbjct: 330 VFRYGLLIYDFFKDSS 345


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 82  TKHSPKPENYTMCLFLFFTSK 144
           TK    P  Y MC + FF S+
Sbjct: 154 TKFIQLPPLYEMCPYFFFNSE 174


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 82  TKHSPKPENYTMCLFLFFTSK 144
           TK    P  Y MC + FF S+
Sbjct: 154 TKFIQLPPLYEMCPYFFFNSE 174


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/19 (36%), Positives = 15/19 (78%)
 Frame = +3

Query: 315 IDMSIQIDLNIIVSFKEYG 371
           +D+++ +DL+I  + +EYG
Sbjct: 676 VDVTLPLDLHIQNAIREYG 694


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic
          acetylcholine receptor alpha1subunit protein.
          Length = 601

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 2  SSLSLSNRIYCDIA*NYNRARKSV 73
          S+ S + R+Y D+  NYNR  + V
Sbjct: 16 SANSEAKRLYDDLLSNYNRLIRPV 39


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 479 FLIYQSLSKSRLPALII 529
           F+IY SLS   +P +I+
Sbjct: 343 FIIYSSLSSFYIPCIIM 359


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,281
Number of Sequences: 438
Number of extensions: 4479
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)