Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0770X.Seq
         (454 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    23   1.3  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   1.8  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   3.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   4.1  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   4.1  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   5.4  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   5.4  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   5.4  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   5.4  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    20   9.4  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 404 QLSKFINSNTINVLSLKYFI 345
           +L  F+N   ++  SLKYF+
Sbjct: 295 RLKDFVNRGNVSFNSLKYFV 314


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = -3

Query: 428 KKFDVTLCQLSKFINSNTINVLSLKYFINTKIFNV 324
           K  D+T+ +   F     +  L +  + N K FN+
Sbjct: 546 KNIDLTVLESGAFCKMQPLRTLKIGVYRNIKNFNI 580


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 132 INY*PIFNAGFEPYSL 85
           +NY P  + GF PY +
Sbjct: 330 LNYVPHISTGFSPYEI 345


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -3

Query: 419 DVTLCQLSKFINSNTINVLSLKYFINTKIFNVGN 318
           D TL +L ++IN  T   + L   I   +  +GN
Sbjct: 119 DETLAKLGQYINYETDYYVCLAMTITGPLVIIGN 152


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +1

Query: 319 LPTLKIFVLIKYFNDNTLIVFELI 390
           LPTLK+F L +++    L V  LI
Sbjct: 161 LPTLKLFALHEFYGFCYLWVLILI 184


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +2

Query: 17  CAFGQFFFIDMSIQIDLNI 73
           C F  F F D S Q  LNI
Sbjct: 292 CLFLLFVFCDCSHQASLNI 310


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory
          receptor candidate 41 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 10 GNLCIWTIF 36
          G LCIW+IF
Sbjct: 53 GCLCIWSIF 61


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +2

Query: 17  CAFGQFFFIDMSIQIDLNI 73
           C F  F F D S Q  LNI
Sbjct: 292 CLFLLFVFCDCSHQASLNI 310


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +2

Query: 17  CAFGQFFFIDMSIQIDLNI 73
           C F  F F D S Q  LNI
Sbjct: 292 CLFLLFVFCDCSHQASLNI 310


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +1

Query: 79  LLQRIRFKTCIKYRLIVNLLFM*DVVPKSF 168
           L++  RF+  +K   I N + + DVV + F
Sbjct: 43  LVRLARFRDSVKLSKIPNNVNLMDVVAREF 72


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,021
Number of Sequences: 336
Number of extensions: 2171
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10301074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)