Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0770X.Seq
         (454 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016452-18|AAB66009.1|  405|Caenorhabditis elegans Hypothetical...    29   2.1  
AF016443-3|AAC24281.1|  395|Caenorhabditis elegans Hypothetical ...    28   2.8  
U41109-7|AAQ62450.1| 1045|Caenorhabditis elegans Guanylyl cyclas...    27   4.8  
U41109-6|AAQ62451.1| 1111|Caenorhabditis elegans Guanylyl cyclas...    27   4.8  
AF016443-2|AAC24272.1|  359|Caenorhabditis elegans Hypothetical ...    27   6.4  
Z49128-8|CAA88960.2|  989|Caenorhabditis elegans Hypothetical pr...    27   8.4  
AL021171-6|CAA15960.2|  989|Caenorhabditis elegans Hypothetical ...    27   8.4  
AF016443-1|AAC24277.1|  366|Caenorhabditis elegans Hypothetical ...    27   8.4  

>AF016452-18|AAB66009.1|  405|Caenorhabditis elegans Hypothetical
           protein T05H4.2 protein.
          Length = 405

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 19/75 (25%), Positives = 32/75 (42%)
 Frame = +1

Query: 208 LIYQSLSKSQIAGFDKDDSHTERINLYYRCTVNQSNWLPTLKIFVLIKYFNDNTLIVFEL 387
           +I   + + +   FD  +   + I +    +V   +W  T +I VL+KYF    L    +
Sbjct: 213 IIMTEIMEEEFVSFDAINDVLKSIGILSAKSV-LLDWFHTFEITVLLKYFKPGILEDLTI 271

Query: 388 INLDS*HNVTSNFFY 432
             L+S    T N  Y
Sbjct: 272 KCLESDEEFTGNLVY 286


>AF016443-3|AAC24281.1|  395|Caenorhabditis elegans Hypothetical
           protein C17E7.7 protein.
          Length = 395

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = +2

Query: 86  KEYGSKPALNIG**LICYLCKMSFRRVL*LPMEY--KVNNSFF 208
           K++GS+P       L C  CKM FRRV+   +EY  K +N+ F
Sbjct: 60  KDFGSQPKQV----LTCDACKMFFRRVVTEKLEYTCKCSNNCF 98


>U41109-7|AAQ62450.1| 1045|Caenorhabditis elegans Guanylyl cyclase
           protein 7, isoforma protein.
          Length = 1045

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +1

Query: 199 FVFLI-YQSLSKSQIAGFDKDDSHTERINLYYRCTVNQSNWLPTLKIFVLIKYFNDNTLI 375
           F F I +    +S+ AG   D      +++    T+NQ    PTL  F++  YFN   +I
Sbjct: 79  FNFTIEFDDCVESEAAGMTVDLIEKHNVDVIIGPTMNQ----PTLAAFIVSNYFN-RPII 133

Query: 376 VFELIN 393
            + L+N
Sbjct: 134 AWGLVN 139


>U41109-6|AAQ62451.1| 1111|Caenorhabditis elegans Guanylyl cyclase
           protein 7, isoformb protein.
          Length = 1111

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +1

Query: 199 FVFLI-YQSLSKSQIAGFDKDDSHTERINLYYRCTVNQSNWLPTLKIFVLIKYFNDNTLI 375
           F F I +    +S+ AG   D      +++    T+NQ    PTL  F++  YFN   +I
Sbjct: 79  FNFTIEFDDCVESEAAGMTVDLIEKHNVDVIIGPTMNQ----PTLAAFIVSNYFN-RPII 133

Query: 376 VFELIN 393
            + L+N
Sbjct: 134 AWGLVN 139


>AF016443-2|AAC24272.1|  359|Caenorhabditis elegans Hypothetical
           protein C17E7.6 protein.
          Length = 359

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 128 LICYLCKMSFRRVL*LPMEYK 190
           L C  CKM FRR++ L  +YK
Sbjct: 41  LTCDACKMFFRRIVILKKDYK 61


>Z49128-8|CAA88960.2|  989|Caenorhabditis elegans Hypothetical
           protein M03C11.8 protein.
          Length = 989

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -3

Query: 389 INSNTINVLSLKYFINTKIFN 327
           + +N I ++SL YF+ +K+FN
Sbjct: 557 LQNNLIELISLMYFVLSKVFN 577


>AL021171-6|CAA15960.2|  989|Caenorhabditis elegans Hypothetical
           protein M03C11.8 protein.
          Length = 989

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -3

Query: 389 INSNTINVLSLKYFINTKIFN 327
           + +N I ++SL YF+ +K+FN
Sbjct: 557 LQNNLIELISLMYFVLSKVFN 577


>AF016443-1|AAC24277.1|  366|Caenorhabditis elegans Hypothetical
           protein C17E7.5 protein.
          Length = 366

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 128 LICYLCKMSFRRVL*LPMEYK 190
           L C  CKM +RR++ L  EYK
Sbjct: 54  LTCDACKMFYRRIVILNREYK 74


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,785,643
Number of Sequences: 27780
Number of extensions: 182754
Number of successful extensions: 408
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 408
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 799252350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)